Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,107,469 +C intergenic (‑296/‑101) b2965 ← / → yqgA ornithine decarboxylase isozyme/putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,107,4691.C98.1% 1788.2 / 18.1 474intergenic (‑296/‑101)b2965/yqgAornithine decarboxylase isozyme/putative transport protein
Reads supporting (aligned to +/- strand):  ref base . (3/6);  new base C (230/234);  total (234/240)
Fisher's exact test for biased strand distribution p-value = 5.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01

Only 100 of 550 total aligned reads displayed.

CGCGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA  >  NC_000913/3107374‑3107558
                                                                                                  |                                                                                         
 gcgAAACGGCGATCAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttc                                                                                           <  2:7502024/96‑2 (MQ=255)
 gcgAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCATACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttc                                                                                           <  2:12884350/96‑2 (MQ=255)
 gcgAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttc                                                                                           <  2:5795339/96‑2 (MQ=255)
   gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgc                                                                                         <  2:2585101/96‑4 (MQ=255)
   gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgc                                                                                         >  1:4879612/1‑93 (MQ=255)
   gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgc                                                                                         >  2:476221/1‑93 (MQ=255)
   gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgc                                                                                         >  1:9082324/1‑93 (MQ=255)
   gAAACGGCGATAAGCGAAAGAATGTAAGAAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgc                                                                                         >  1:6750639/1‑93 (MQ=255)
      aCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaa                                                                                      <  1:9709800/96‑1 (MQ=255)
      aCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaa                                                                                      >  2:13362005/1‑96 (MQ=255)
       cGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaaa                                                                                     >  1:1375622/1‑96 (MQ=255)
        ggCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAg                                                                                    <  1:12135600/96‑1 (MQ=255)
          cGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCg                                                                                  >  2:11755342/1‑96 (MQ=255)
           gATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGt                                                                                 <  1:11866029/96‑1 (MQ=255)
           gATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTAGCTAAAGctt                                                                                 >  2:13207252/1‑94 (MQ=255)
            aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTg                                                                                >  2:6813023/1‑96 (MQ=255)
            aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTg                                                                                <  1:806515/96‑1 (MQ=255)
              aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCa                                                                              >  1:8588197/1‑96 (MQ=255)
              aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCa                                                                              <  2:4489121/96‑1 (MQ=255)
               aGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCaa                                                                             <  1:3751568/96‑1 (MQ=255)
               aGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCaa                                                                             <  2:2754758/96‑1 (MQ=255)
               aGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCaa                                                                             <  2:8819228/96‑1 (MQ=255)
                gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAg                                                                            >  2:5553292/1‑96 (MQ=255)
                gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAg                                                                            <  1:12254237/96‑1 (MQ=255)
                gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAg                                                                            >  1:7048297/1‑96 (MQ=255)
                 cGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGc                                                                           >  2:11402447/1‑96 (MQ=255)
                 cGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGc                                                                           >  2:9557777/1‑96 (MQ=255)
                  gagagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGcc                                                                          >  1:1472852/1‑96 (MQ=255)
                   agagaATGTATGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCa                                                                         >  1:5576055/1‑96 (MQ=255)
                       aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGAc                                                                     <  2:3968001/96‑1 (MQ=255)
                            aaGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCGTTCGCTAAAGCGTGCAAGCCAGGACTTTGc                                                                >  2:11631868/1‑96 (MQ=255)
                             aGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCg                                                               >  2:6020000/1‑96 (MQ=255)
                              ggAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGcca                                                              <  1:7357339/96‑3 (MQ=255)
                                   tGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa                                                         >  2:11153839/1‑96 (MQ=255)
                                   tGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa                                                         >  2:9399636/1‑96 (MQ=255)
                                   nggCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa                                                         >  1:4656039/2‑96 (MQ=255)
                                     gCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                       >  1:6448614/1‑96 (MQ=255)
                                     gCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                       <  2:10047765/96‑1 (MQ=255)
                                      cGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCCCCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAacaaacaa                                                      <  2:8676784/96‑1 (MQ=255)
                                      cGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAacaaacaa                                                      >  2:7029609/1‑96 (MQ=255)
                                       gTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAg                                                     <  2:8296765/96‑1 (MQ=255)
                                         gCATCGGGCAAACTCCGTACAGAGAGGAGAAAAATCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGcc                                                   >  2:14049205/1‑96 (MQ=255)
                                           aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt                                                 >  1:10072566/1‑96 (MQ=255)
                                           aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt                                                 >  2:5238297/1‑96 (MQ=255)
                                            tCGGGCAACCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAACCAAGCCATc                                                <  1:9451503/96‑1 (MQ=255)
                                            tCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATc                                                <  2:12110320/96‑1 (MQ=255)
                                             cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCg                                               >  2:13583328/1‑96 (MQ=255)
                                             cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCg                                               >  1:2410737/1‑96 (MQ=255)
                                              gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                              >  2:2184803/1‑96 (MQ=255)
                                              gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                              >  2:4554754/1‑96 (MQ=255)
                                              gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                              <  1:1233921/96‑1 (MQ=255)
                                              gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                              >  1:619965/1‑96 (MQ=255)
                                               ggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAc                                             <  2:12170852/96‑1 (MQ=255)
                                                gCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACg                                            <  2:12683264/96‑1 (MQ=255)
                                                  aaaCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGc                                          >  1:1820398/1‑96 (MQ=255)
                                                    aCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAc                                        <  1:2182052/96‑1 (MQ=255)
                                                    aCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAc                                        <  1:13164184/96‑1 (MQ=255)
                                                      tCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCa                                      <  2:1978591/96‑1 (MQ=255)
                                                       ccGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaa                                     >  1:2031603/1‑96 (MQ=255)
                                                        cGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                    >  2:10174954/1‑96 (MQ=255)
                                                         gTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAc                                   <  2:9177690/96‑1 (MQ=255)
                                                          tACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACg                                  >  2:10346774/1‑96 (MQ=255)
                                                            cAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt                                >  2:8120356/1‑96 (MQ=255)
                                                             agagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCATGCAAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc                               >  2:1764549/1‑96 (MQ=255)
                                                             agagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc                               >  2:5919268/1‑96 (MQ=255)
                                                             agagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc                               <  1:4476142/96‑1 (MQ=255)
                                                             agagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc                               >  1:10374170/1‑96 (MQ=255)
                                                               agagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAACCAAGCCATCGACGGCACCAAACGGTCat                             <  1:13497968/96‑1 (MQ=255)
                                                                gaggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCata                            >  2:1080094/1‑96 (MQ=255)
                                                                 aggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataa                           <  2:1426280/96‑1 (MQ=255)
                                                                 aggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataa                           >  2:4943247/1‑96 (MQ=255)
                                                                  ggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat                          >  2:3639386/1‑96 (MQ=255)
                                                                   gagaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataata                         <  1:2644229/96‑1 (MQ=255)
                                                                    agaAAATTCGCGCAATCATGGCGCCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa                        <  1:3160973/96‑1 (MQ=255)
                                                                     gaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAg                       >  2:3466977/1‑96 (MQ=255)
                                                                     gaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAg                       <  2:6230066/96‑1 (MQ=255)
                                                                      aaaaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa                      >  1:3548006/1‑96 (MQ=255)
                                                                      aaaaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa                      <  1:8424873/96‑1 (MQ=255)
                                                                        aaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGata                    <  1:11659689/96‑3 (MQ=255)
                                                                         aTTCGCGCAATCATGGCACCTTCCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaaa                   <  2:6455261/96‑1 (MQ=255)
                                                                           tCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATc                 >  2:9014952/1‑96 (MQ=255)
                                                                             gggcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaa               >  1:10599978/3‑96 (MQ=255)
                                                                             gcgcAATCATGGCCCCTTTCGCTAAAGCGTGCCAGCCAGGCCTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCac               <  2:3146041/96‑2 (MQ=255)
                                                                              cacAATCATGCCGCCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCata              <  1:14339605/94‑3 (MQ=255)
                                                                               gcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc             <  1:7619333/96‑1 (MQ=255)
                                                                               gcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAAAAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc             <  1:5969732/96‑1 (MQ=255)
                                                                                cAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa            >  2:2845773/1‑96 (MQ=255)
                                                                                 aaTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACaa           <  1:11153839/96‑1 (MQ=255)
                                                                                 aaTCATGGCACCTTTCCCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACaa           <  2:7926750/96‑1 (MQ=255)
                                                                                 aaTCAGGGCACCTTCCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACACGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACaa           <  2:7141930/96‑1 (MQ=255)
                                                                                  aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAt          <  1:5138089/96‑1 (MQ=255)
                                                                                  aTCATGCCGCCTTTCGCTAAAGCGTGAAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAt          <  2:1373293/96‑1 (MQ=255)
                                                                                    cATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAc        >  1:12700397/1‑96 (MQ=255)
                                                                                     agggCCCCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa       <  1:10770879/94‑1 (MQ=255)
                                                                                     aTGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa       >  1:2865844/1‑96 (MQ=255)
                                                                                     aTGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa       <  2:1472852/96‑1 (MQ=255)
                                                                                      tGGCCCCTTTCGCTAAAGCGGGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAg      <  1:3943985/96‑1 (MQ=255)
                                                                                      tGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAg      <  1:5771449/96‑1 (MQ=255)
                                                                                       ggCCCCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGc     <  2:4242380/96‑1 (MQ=255)
                                                                                       ggCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAACAAACAATACAGc     <  1:4198672/96‑1 (MQ=255)
                                                                                                  |                                                                                         
CGCGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA  >  NC_000913/3107374‑3107558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: