Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,107,469 | +C | intergenic (‑296/‑101) | b2965 ← / → yqgA | ornithine decarboxylase isozyme/putative transport protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,107,469 | 1 | . | C | 98.1% | 1788.2 / 18.1 | 474 | intergenic (‑296/‑101) | b2965/yqgA | ornithine decarboxylase isozyme/putative transport protein |
Reads supporting (aligned to +/- strand): ref base . (3/6); new base C (230/234); total (234/240) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.04e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 |
Only 100 of 550 total aligned reads displayed.
CGCGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA > NC_000913/3107374‑3107558 | gcgAAACGGCGATCAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tc < 2:7502024/96‑2 (MQ=255) gcgAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCATACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tc < 2:12884350/96‑2 (MQ=255) gcgAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tc < 2:5795339/96‑2 (MQ=255) gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tcgc < 2:2585101/96‑4 (MQ=255) gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tcgc > 1:4879612/1‑93 (MQ=255) gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tcgc > 2:476221/1‑93 (MQ=255) gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tcgc > 1:9082324/1‑93 (MQ=255) gAAACGGCGATAAGCGAAAGAATGTAAGAAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑tt‑tcgc > 1:6750639/1‑93 (MQ=255) aCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTaa < 1:9709800/96‑1 (MQ=255) aCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTaa > 2:13362005/1‑96 (MQ=255) cGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTaaa > 1:1375622/1‑96 (MQ=255) ggCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAg < 1:12135600/96‑1 (MQ=255) cGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCg > 2:11755342/1‑96 (MQ=255) gATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGt < 1:11866029/96‑1 (MQ=255) gATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TAGCTAAAGctt > 2:13207252/1‑94 (MQ=255) aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTg > 2:6813023/1‑96 (MQ=255) aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTg < 1:806515/96‑1 (MQ=255) aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCa > 1:8588197/1‑96 (MQ=255) aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCa < 2:4489121/96‑1 (MQ=255) aGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCaa < 1:3751568/96‑1 (MQ=255) aGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCaa < 2:2754758/96‑1 (MQ=255) aGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCaa < 2:8819228/96‑1 (MQ=255) gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAg > 2:5553292/1‑96 (MQ=255) gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAg < 1:12254237/96‑1 (MQ=255) gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAg > 1:7048297/1‑96 (MQ=255) cGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGc > 2:11402447/1‑96 (MQ=255) cGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGc > 2:9557777/1‑96 (MQ=255) gagagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGcc > 1:1472852/1‑96 (MQ=255) agagaATGTATGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCa > 1:5576055/1‑96 (MQ=255) aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGAc < 2:3968001/96‑1 (MQ=255) aaGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCGTT‑C‑GCTAAAGCGTGCAAGCCAGGACTTTGc > 2:11631868/1‑96 (MQ=255) aGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCg > 2:6020000/1‑96 (MQ=255) ggAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGcca < 1:7357339/96‑3 (MQ=255) tGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa > 2:11153839/1‑96 (MQ=255) tGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa > 2:9399636/1‑96 (MQ=255) nggCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa > 1:4656039/2‑96 (MQ=255) gCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca > 1:6448614/1‑96 (MQ=255) gCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca < 2:10047765/96‑1 (MQ=255) cGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCCCC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAacaaacaa < 2:8676784/96‑1 (MQ=255) cGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAacaaacaa > 2:7029609/1‑96 (MQ=255) gTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAg < 2:8296765/96‑1 (MQ=255) gCATCGGGCAAACTCCGTACAGAGAGGAGAAAAATCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGcc > 2:14049205/1‑96 (MQ=255) aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt > 1:10072566/1‑96 (MQ=255) aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt > 2:5238297/1‑96 (MQ=255) tCGGGCAACCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAACCAAGCCATc < 1:9451503/96‑1 (MQ=255) tCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATc < 2:12110320/96‑1 (MQ=255) cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCg > 2:13583328/1‑96 (MQ=255) cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCg > 1:2410737/1‑96 (MQ=255) gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa > 2:2184803/1‑96 (MQ=255) gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa > 2:4554754/1‑96 (MQ=255) gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa < 1:1233921/96‑1 (MQ=255) gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa > 1:619965/1‑96 (MQ=255) ggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAc < 2:12170852/96‑1 (MQ=255) gCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACg < 2:12683264/96‑1 (MQ=255) aaaCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGc > 1:1820398/1‑96 (MQ=255) aCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAc < 1:2182052/96‑1 (MQ=255) aCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAc < 1:13164184/96‑1 (MQ=255) tCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCa < 2:1978591/96‑1 (MQ=255) ccGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaa > 1:2031603/1‑96 (MQ=255) cGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa > 2:10174954/1‑96 (MQ=255) gTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAc < 2:9177690/96‑1 (MQ=255) tACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACg > 2:10346774/1‑96 (MQ=255) cAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt > 2:8120356/1‑96 (MQ=255) agagagGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCATGCAAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc > 2:1764549/1‑96 (MQ=255) agagagGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc > 2:5919268/1‑96 (MQ=255) agagagGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc < 1:4476142/96‑1 (MQ=255) agagagGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc > 1:10374170/1‑96 (MQ=255) agagGAGAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAACCAAGCCATCGACGGCACCAAACGGTCat < 1:13497968/96‑1 (MQ=255) gaggagAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCata > 2:1080094/1‑96 (MQ=255) aggagAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataa < 2:1426280/96‑1 (MQ=255) aggagAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataa > 2:4943247/1‑96 (MQ=255) ggagAAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat > 2:3639386/1‑96 (MQ=255) gagaAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataata < 1:2644229/96‑1 (MQ=255) agaAAATTCGCGCAATCATGGCGCC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa < 1:3160973/96‑1 (MQ=255) gaAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAg > 2:3466977/1‑96 (MQ=255) gaAAATTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAg < 2:6230066/96‑1 (MQ=255) aaaaTTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa > 1:3548006/1‑96 (MQ=255) aaaaTTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa < 1:8424873/96‑1 (MQ=255) aaTTCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGata < 1:11659689/96‑3 (MQ=255) aTTCGCGCAATCATGGCACC‑TTCC‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaaa < 2:6455261/96‑1 (MQ=255) tCGCGCAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATc > 2:9014952/1‑96 (MQ=255) gggcAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaa > 1:10599978/3‑96 (MQ=255) gcgcAATCATGGCCCC‑TT‑TCGCTAAAGCGTGCCAGCCAGGCCTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCac < 2:3146041/96‑2 (MQ=255) cacAATCATGCCGCC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCata < 1:14339605/94‑3 (MQ=255) gcAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc < 1:7619333/96‑1 (MQ=255) gcAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAAAAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc < 1:5969732/96‑1 (MQ=255) cAATCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa > 2:2845773/1‑96 (MQ=255) aaTCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACaa < 1:11153839/96‑1 (MQ=255) aaTCATGGCACC‑TT‑TCCCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACaa < 2:7926750/96‑1 (MQ=255) aaTCAGGGCACC‑TTCC‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACACGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACaa < 2:7141930/96‑1 (MQ=255) aTCATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAt < 1:5138089/96‑1 (MQ=255) aTCATGCCGCC‑TT‑TCGCTAAAGCGTGAAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAt < 2:1373293/96‑1 (MQ=255) cATGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAc > 1:12700397/1‑96 (MQ=255) agggCCCC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa < 1:10770879/94‑1 (MQ=255) aTGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa > 1:2865844/1‑96 (MQ=255) aTGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa < 2:1472852/96‑1 (MQ=255) tGGCCCC‑TT‑TCGCTAAAGCGGGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAg < 1:3943985/96‑1 (MQ=255) tGGCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAg < 1:5771449/96‑1 (MQ=255) ggCCCC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGc < 2:4242380/96‑1 (MQ=255) ggCACC‑TT‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAACAAACAATACAGc < 1:4198672/96‑1 (MQ=255) | CGCGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACC‑TT‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA > NC_000913/3107374‑3107558 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |