Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,430,453 +C coding (745/747 nt) smf ← putative Rossmann‑fold nucleotide‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,430,4531.C99.8% 1629.8 / NA 417P249A (CCT→GCT) smfputative Rossmann‑fold nucleotide‑binding protein
Reads supporting (aligned to +/- strand):  ref base . (1/0);  major base C (205/210);  minor base A (0/1);  total (206/211)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 466 total aligned reads displayed.

CCAGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC  >  NC_000913/3430358‑3430542
                                                                                                 |                                                                                         
 cAGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAggc                                                                                           >  1:1051928/1‑95 (MQ=255)
  aGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAggca                                                                                          >  2:13669573/1‑94 (MQ=255)
     aTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGcaaaa                                                                                      <  2:3880033/96‑1 (MQ=255)
      tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGcaaaaa                                                                                     >  1:5699415/1‑95 (MQ=255)
       ttcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGcaaaaac                                                                                    >  2:10909806/1‑94 (MQ=255)
        tcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACt                                                                                    <  2:1300108/96‑1 (MQ=255)
         cttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACtt                                                                                   >  2:1239141/1‑96 (MQ=255)
          ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtc                                                                                  >  1:3344959/1‑96 (MQ=255)
          ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtc                                                                                  <  2:10956900/96‑1 (MQ=255)
           tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                                 >  2:1917450/1‑96 (MQ=255)
           tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                                 <  1:9996199/96‑1 (MQ=255)
           tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                                 >  2:2209034/1‑96 (MQ=255)
            ccGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                                >  1:9623584/1‑96 (MQ=255)
            ccGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                                <  2:988497/96‑1 (MQ=255)
              ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGc                                                                              >  1:12291200/1‑96 (MQ=255)
              ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGc                                                                              >  2:2372957/1‑96 (MQ=255)
              ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGc                                                                              >  1:9199574/1‑96 (MQ=255)
                ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGccc                                                                            >  2:3364031/1‑96 (MQ=255)
                ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGccc                                                                            <  2:4899536/96‑1 (MQ=255)
                ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGccc                                                                            <  1:10004550/96‑1 (MQ=255)
                 tCCGTCACAAGAATCGCACCTTGATTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGcccc                                                                           <  1:10099825/96‑1 (MQ=255)
                   cGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTg                                                                         <  2:7228964/96‑1 (MQ=255)
                   cGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACATCTCGCCCCTg                                                                         >  1:4847796/1‑96 (MQ=255)
                    gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                        >  2:5914374/1‑96 (MQ=255)
                      cacaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGTCCCTGCTc                                                                      >  1:2421197/1‑96 (MQ=255)
                      cacaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTc                                                                      <  1:593016/96‑1 (MQ=255)
                       agaaGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCa                                                                     >  1:10830588/3‑96 (MQ=255)
                       acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCa                                                                     >  1:6810087/1‑96 (MQ=255)
                       acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCa                                                                     >  1:13724262/1‑96 (MQ=255)
                          aGAATCGCACCTTGTTTTATTAATCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTCGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgc                                                                  <  2:12606675/96‑1 (MQ=255)
                          aGAATCGCACCTTGTTTTATTAACCAGGGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgc                                                                  >  2:3653963/1‑96 (MQ=255)
                           gAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgcg                                                                 >  2:635484/1‑96 (MQ=255)
                           gAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgcg                                                                 >  1:303784/1‑96 (MQ=255)
                            aaTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgcgc                                                                >  2:4131957/1‑96 (MQ=255)
                             aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGCCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGca                                                               <  1:1458276/96‑1 (MQ=255)
                              tCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTGAAGCGcac                                                              >  1:7741869/1‑96 (MQ=255)
                              tCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcac                                                              <  2:3471584/96‑1 (MQ=255)
                              tCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcac                                                              >  1:7862663/1‑96 (MQ=255)
                               cGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcaca                                                             <  2:11869420/96‑1 (MQ=255)
                               cGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcaca                                                             <  1:8271320/96‑1 (MQ=255)
                                gCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                            >  1:13095173/1‑96 (MQ=255)
                                 cACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc                                                           >  2:806338/1‑96 (MQ=255)
                                    cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTg                                                        <  2:9277441/96‑1 (MQ=255)
                                     ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGc                                                       >  2:11710747/1‑96 (MQ=255)
                                       gTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTg                                                     <  2:276659/96‑1 (MQ=255)
                                         tttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc                                                   <  1:6483528/96‑1 (MQ=255)
                                         tttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc                                                   >  1:2679140/1‑96 (MQ=255)
                                         tttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc                                                   <  1:3866658/96‑1 (MQ=255)
                                          ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCa                                                  <  2:5272338/96‑1 (MQ=255)
                                          ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                                  >  1:2543923/1‑96 (MQ=255)
                                               aaCCAGTGAGGCCCTTCGCTTCCAGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGc                                             <  1:12510563/96‑1 (MQ=255)
                                                 ccAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGa                                           >  2:419751/1‑96 (MQ=255)
                                                 ccAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGa                                           <  1:5182262/96‑1 (MQ=255)
                                                 ccAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGa                                           >  2:6707918/1‑96 (MQ=255)
                                                   aGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAAc                                         <  2:14392316/96‑1 (MQ=255)
                                                   aGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAc                                         >  1:8477235/1‑96 (MQ=255)
                                                   aGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAc                                         >  2:10230350/1‑96 (MQ=255)
                                                         gCCCTTCGCTTCCCGGATTCCCTCTTGGCCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACttc                                   <  1:10286341/96‑3 (MQ=255)
                                                         gCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                   >  1:3589198/1‑96 (MQ=255)
                                                           ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGc                                 <  2:7563831/96‑1 (MQ=255)
                                                           ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGc                                 >  2:4515492/1‑96 (MQ=255)
                                                             ttCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaa                               >  1:13540911/1‑96 (MQ=255)
                                                              tCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCaaa                              <  2:8743917/96‑1 (MQ=255)
                                                              tCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACATGCTGTCACCAGCGAACCACTACGCaaa                              <  2:13916320/96‑1 (MQ=255)
                                                               cccTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg                             >  1:11123089/3‑96 (MQ=255)
                                                               cGCTTCCCGTATTCCCTATTGGACCTGGCAGGGCAAAATCTTCTCGCCCCTGCTCAAGCGCACAACGTCCTGTCACCAGCGAAACACTACGCAAAg                             <  1:7322478/96‑1 (MQ=255)
                                                                 cTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                           <  1:4565719/96‑1 (MQ=255)
                                                                  ttCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCg                          <  1:2156878/96‑1 (MQ=255)
                                                                  ttCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCg                          <  2:7017359/96‑1 (MQ=255)
                                                                   tCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                         <  2:5538141/96‑1 (MQ=255)
                                                                   tCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                         >  1:14013847/1‑96 (MQ=255)
                                                                    cccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCt                        <  2:1281620/96‑1 (MQ=255)
                                                                    cccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCt                        <  1:5466091/96‑1 (MQ=255)
                                                                     ccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGcgt                       >  2:12167594/1‑94 (MQ=255)
                                                                      cGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTc                      >  1:13394670/1‑96 (MQ=255)
                                                                       ggATTCCCTATTGGACCTGGCAAGGCAAAAACTGCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcc                     >  2:11584989/1‑96 (MQ=255)
                                                                         cttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccac                   >  1:1728724/2‑96 (MQ=255)
                                                                         aTTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccac                   >  2:10128339/1‑96 (MQ=255)
                                                                          ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacc                  <  1:8106521/96‑1 (MQ=255)
                                                                          ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGAGCACAACGTGCTGTCACCAGCGAACCACTACGCCAAGCCGCTTccacc                  >  2:4617647/1‑96 (MQ=255)
                                                                           tCCCTATTGGACCTGGCAAGGCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacca                 <  1:31177/96‑1 (MQ=255)
                                                                           tCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacca                 <  2:3111012/96‑1 (MQ=255)
                                                                              cTATTGGACCTGGGAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca              >  1:13859763/1‑96 (MQ=255)
                                                                               aaTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAg             >  1:11414980/2‑96 (MQ=255)
                                                                                aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt            >  1:11826167/1‑96 (MQ=255)
                                                                                aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt            >  2:8413535/1‑96 (MQ=255)
                                                                                aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt            <  2:10650092/96‑1 (MQ=255)
                                                                                  tGGACCTAGCAAAGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTac          <  1:2842288/96‑1 (MQ=255)
                                                                                   ggACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACGACTACGCAAAGCCGCTTCCACCCCCAGTaca         <  1:2003038/96‑1 (MQ=255)
                                                                                   ggACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca         <  1:13312350/96‑1 (MQ=255)
                                                                                   ggACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca         >  2:9099292/1‑96 (MQ=255)
                                                                                    gACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTacac        >  1:1206363/1‑96 (MQ=255)
                                                                                    gACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTacac        >  1:8698880/1‑96 (MQ=255)
                                                                                    gACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTacac        >  1:7050588/1‑96 (MQ=255)
                                                                                     aCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAcc       <  1:9886677/96‑1 (MQ=255)
                                                                                      ccTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACACCGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCt      <  1:4155954/96‑1 (MQ=255)
                                                                                        tGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCCCCACCAGTACACCttt    <  2:6257894/96‑1 (MQ=255)
                                                                                        tGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCttt    <  2:14078131/96‑1 (MQ=255)
                                                                                         ggcaaggcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTa   >  2:2673319/1‑96 (MQ=255)
                                                                                         ggcaaggcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAATACACCTTTa   >  2:13211508/1‑96 (MQ=255)
                                                                                                 |                                                                                         
CCAGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC  >  NC_000913/3430358‑3430542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: