BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,041,654	G→A	intergenic (+29/‑125)	dsbA → / → b3861	protein disulfide isomerase I/putative GTP‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,041,654	0	G	A	100.0%	1073.3 / NA	269	intergenic (+29/‑125)	dsbA/b3861	protein disulfide isomerase I/putative GTP‑binding protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (91/178); total (91/178)

Only 100 of 272 total aligned reads displayed.

GCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAGTATTCACGGGC‑TTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATT  >  NC_000913/4041561‑4041745

 cAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAatat                                                                                             <  1:6023714/96‑1 (MQ=255)

  aaTATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATAtt                                                                                            <  1:3256399/96‑1 (MQ=255)

   atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc                                                                                           >  2:9685557/1‑96 (MQ=255)

   atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc                                                                                           <  2:8491029/96‑1 (MQ=255)

   atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc                                                                                           <  2:2753383/96‑1 (MQ=255)

   atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc                                                                                           <  2:7047989/96‑1 (MQ=255)

   atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc                                                                                           <  1:1025454/96‑1 (MQ=255)

     atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc                                                                                         >  2:11174701/1‑96 (MQ=255)

     atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc                                                                                         <  2:2875773/96‑1 (MQ=255)

     atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc                                                                                         <  1:13183741/96‑1 (MQ=255)

     atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc                                                                                         >  2:11384335/1‑96 (MQ=255)

      tGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACg                                                                                        <  1:6151088/96‑1 (MQ=255)

      tGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACg                                                                                        <  1:7234826/96‑1 (MQ=255)

       ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAATAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAccg                                                                                       <  1:13051773/96‑3 (MQ=255)

       ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACgg                                                                                       <  2:6538523/96‑1 (MQ=255)

       ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACgg                                                                                       <  2:13831429/96‑1 (MQ=255)

       ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACgg                                                                                       <  1:1380939/96‑1 (MQ=255)

         aTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGc                                                                                     <  2:2007407/96‑1 (MQ=255)

         aTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGc                                                                                     >  1:9625930/1‑96 (MQ=255)

         aTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGc                                                                                     <  2:5319547/96‑1 (MQ=255)

          tGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑t                                                                                   <  1:1637618/96‑1 (MQ=255)

          tGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑t                                                                                   >  2:14212426/1‑96 (MQ=255)

           gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt                                                                                  <  1:3503880/96‑1 (MQ=255)

           gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt                                                                                  <  2:5622952/96‑1 (MQ=255)

           gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt                                                                                  <  1:4527007/96‑1 (MQ=255)

           gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt                                                                                  <  1:3533703/96‑1 (MQ=255)

            tttttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt                                                                                 <  1:10920050/96‑1 (MQ=255)

            tttttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt                                                                                 <  2:4219316/96‑1 (MQ=255)

            tttttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt                                                                                 <  2:7304132/96‑1 (MQ=255)

              tttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑t                                                                             <  1:9314709/96‑1 (MQ=255)

                tGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttt                                                                           >  1:8282603/1‑95 (MQ=255)

                tGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttt                                                                           <  2:357956/96‑2 (MQ=255)

                 gTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttta                                                                          >  2:10056459/1‑94 (MQ=255)

                 gTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttta                                                                          >  1:5403274/1‑94 (MQ=255)

                  ttCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttat                                                                         <  2:2997538/96‑4 (MQ=255)

                  ttCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttat                                                                         <  2:4438683/96‑4 (MQ=255)

                   tCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttatt                                                                        >  2:2495940/1‑92 (MQ=255)

                   tCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttatt                                                                        <  2:5505913/96‑5 (MQ=255)

                   tCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttatt                                                                        >  1:2983796/1‑92 (MQ=255)

                     agcagTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑Ttattat                                                                       >  2:8042103/1‑96 (MQ=255)

                     agcagTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑Ttattat                                                                       >  2:8352201/1‑96 (MQ=255)

                       cagTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTAttt                                                                     <  1:6612848/96‑1 (MQ=255)

                        agTATGCTGGTACAGTGAAATAGCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTta                                                                    >  1:1963329/1‑96 (MQ=255)

                          tATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaat                                                                  <  2:3320274/96‑1 (MQ=255)

                           aTGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaata                                                                 >  2:7940139/1‑96 (MQ=255)

                           aTGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaata                                                                 <  2:8757800/96‑1 (MQ=255)

                            tGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaataa                                                                <  1:4287693/96‑1 (MQ=255)

                             gCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTaataaa                                                               <  2:6239603/96‑1 (MQ=255)

                              cTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGTGC‑TTT‑TATTATTATTTaataaat                                                              >  1:10360744/1‑96 (MQ=255)

                               tGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTaataaata                                                             <  2:12388891/96‑1 (MQ=255)

                                 aTACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatata                                                           <  1:12457461/96‑1 (MQ=255)

                                 aTACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatata                                                           >  1:12111215/1‑96 (MQ=255)

                                  tACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatataa                                                          <  2:6690719/96‑1 (MQ=255)

                                  tACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatataa                                                          <  2:12523644/96‑1 (MQ=255)

                                     aGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAAtaaatataaata                                                       >  1:2108903/1‑96 (MQ=255)

                                     aGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAAtaaatataaata                                                       <  1:13723381/96‑1 (MQ=255)

                                     aGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAAtaaatataaata                                                       <  1:9737265/96‑1 (MQ=255)

                                      gTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATAc                                                      <  2:1181423/96‑1 (MQ=255)

                                      gTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATAc                                                      >  1:7386988/1‑96 (MQ=255)

                                       tGAAAGATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACa                                                     <  1:2444093/96‑1 (MQ=255)

                                           atatCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCt                                                 >  1:10887204/1‑96 (MQ=255)

                                             atCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGa                                               >  2:11753874/1‑96 (MQ=255)

                                               cTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATa                                             <  1:14016470/96‑1 (MQ=255)

                                                 gTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAAt                                           >  1:3755559/1‑96 (MQ=255)

                                                  tCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATg                                          <  2:10617945/96‑1 (MQ=255)

                                                  tCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATg                                          >  1:1705779/1‑96 (MQ=255)

                                                   ccGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGc                                         >  2:3947560/1‑96 (MQ=255)

                                                      agaAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATc                                      <  1:7982427/96‑1 (MQ=255)

                                                      agaAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATc                                      >  1:4725318/1‑96 (MQ=255)

                                                       gaAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATcc                                     <  1:9248734/96‑1 (MQ=255)

                                                        aaaaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCt                                    <  1:9991677/96‑1 (MQ=255)

                                                        aaaaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCt                                    <  2:4702800/96‑1 (MQ=255)

                                                         aaaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTg                                   <  2:9096141/96‑1 (MQ=255)

                                                          aaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGc                                  <  1:1512503/96‑1 (MQ=255)

                                                           aaaTAATTCAATGTAAATTACATAAATCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGcc                                 <  2:13274111/96‑1 (MQ=255)

                                                           aaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGcc                                 <  2:12192136/96‑1 (MQ=255)

                                                            aataatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTAATAATGCATCCTGCCg                                >  1:10485643/1‑96 (MQ=255)

                                                             ataatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGc                               >  1:5436533/1‑96 (MQ=255)

                                                               aatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTg                             <  1:295926/96‑1 (MQ=255)

                                                               aatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTg                             >  1:11905076/1‑96 (MQ=255)

                                                                atTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTgg                            <  2:1430870/96‑1 (MQ=255)

                                                                 ttCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGa                           >  1:5266503/1‑96 (MQ=255)

                                                                    aaTGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACat                        <  2:13725719/96‑1 (MQ=255)

                                                                     aggTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACatt                       >  1:14274488/3‑96 (MQ=255)

                                                                       gTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACattat                     <  2:6283855/96‑1 (MQ=255)

                                                                        tAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACattatt                    <  2:2342113/96‑1 (MQ=255)

                                                                          aaTTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTc                  <  1:1221252/96‑1 (MQ=255)

                                                                            ttACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAg                >  2:7582611/1‑96 (MQ=255)

                                                                             tACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGc               <  2:1284566/96‑1 (MQ=255)

                                                                              aCATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCa              <  2:10887204/96‑1 (MQ=255)

                                                                                aTAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATa            <  1:6807601/96‑1 (MQ=255)

                                                                                 tAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCAtta           <  1:10811234/96‑3 (MQ=255)

                                                                                 tAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATaa           >  2:11563176/1‑96 (MQ=255)

                                                                                   aaGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGt         <  1:12410674/96‑1 (MQ=255)

                                                                                    aGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTg        <  1:14411348/96‑1 (MQ=255)

                                                                                    aGCCCCTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTg        <  1:6435378/96‑1 (MQ=255)

                                                                                     gCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTgg       <  2:9215993/96‑1 (MQ=255)

                                                                                      cccGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGa      >  2:14355947/1‑96 (MQ=255)

                                                                                         gTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGatat   <  2:5970852/96‑1 (MQ=255)

                                                                                         gTGAATATTCACGGGC‑TTTGT‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGatat   <  1:11602107/96‑1 (MQ=255)

GCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAGTATTCACGGGC‑TTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATT  >  NC_000913/4041561‑4041745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`