Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,091,351 C→T G168D (GGC→GAC)  rhaD ← rhamnulose‑phosphate aldolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,091,3510CT99.8% 1937.1 / NA 503G168D (GGC→GAC) rhaDrhamnulose‑phosphate aldolase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base T (262/239);  minor base G (1/0);  total (263/240)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 535 total aligned reads displayed.

TGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACC  >  NC_000913/4091258‑4091443
                                                                                             |                                                                                            
     ggTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCTCCAGACACTCGGTGCTGTCTTCCca                                                                                       <  1:11018521/96‑1 (MQ=255)
     ggTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCca                                                                                       >  2:9087579/1‑96 (MQ=255)
      gTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCcac                                                                                      <  2:455953/96‑1 (MQ=255)
       tCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGTTGCTGTCTTCCcaca                                                                                     >  1:4008949/1‑96 (MQ=255)
        cGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAg                                                                                    >  2:11387536/1‑96 (MQ=255)
         gCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAAGGCCATCCGGGAATACCACCAGACACTCGTGGCTGTCTTCCCACAGt                                                                                   >  1:2013612/1‑96 (MQ=255)
         gCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGt                                                                                   >  2:6459391/1‑96 (MQ=255)
          ccTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGtt                                                                                  >  2:1189335/1‑96 (MQ=255)
           gtGGCCGATCTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCACCGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTg                                                                                 <  1:6859883/95‑1 (MQ=255)
           cTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTg                                                                                 <  2:6993647/96‑1 (MQ=255)
           cTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGCGAATACCACCAGACACTCGGCGCTGTCTTCCCACCGTTg                                                                                 <  1:10144506/96‑1 (MQ=255)
            tGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATAGCAAAAGACACTCGGGGCTGTCTTCCCACAGTTgg                                                                                >  1:10666266/1‑96 (MQ=255)
            tGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTgg                                                                                >  1:212963/1‑96 (MQ=255)
            tGGCCGATTTCGTCCATGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTgg                                                                                >  2:13019297/1‑96 (MQ=255)
                  aTTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTg                                                                          <  2:54697/96‑1 (MQ=255)
                  aTTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTg                                                                          >  2:6191961/1‑96 (MQ=255)
                  aTTGCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTg                                                                          <  2:7028288/96‑1 (MQ=255)
                   tttCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGCCACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGa                                                                         <  1:896194/96‑1 (MQ=255)
                    ttCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGaa                                                                        >  1:5251254/1‑96 (MQ=255)
                    ttCGTCCGTGCCGGGCACAATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGaa                                                                        <  1:7193621/96‑1 (MQ=255)
                     tCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAg                                                                       <  1:4516884/96‑1 (MQ=255)
                      cGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGa                                                                      <  1:13624476/96‑1 (MQ=255)
                      cGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGa                                                                      <  2:2149642/96‑1 (MQ=255)
                       gTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGAc                                                                     >  1:9488811/1‑96 (MQ=255)
                       gTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGAc                                                                     <  1:12203363/96‑1 (MQ=255)
                       gTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGAc                                                                     >  1:12367011/1‑96 (MQ=255)
                         ccGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACcg                                                                   >  2:1078492/1‑96 (MQ=255)
                             gCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgt                                                               <  2:5915111/96‑1 (MQ=255)
                             gCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgt                                                               >  1:13095528/1‑96 (MQ=255)
                              ccGGGCACCATCCCCGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGGGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgtg                                                              >  1:7517936/1‑96 (MQ=255)
                              ccGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgtg                                                              <  2:10466114/96‑1 (MQ=255)
                              ccGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCGGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgtg                                                              >  2:3628727/1‑96 (MQ=255)
                               cGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgtgt                                                             <  2:5739486/96‑1 (MQ=255)
                               cGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgtgt                                                             >  1:7959012/1‑96 (MQ=255)
                               cGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgtgt                                                             >  2:670396/1‑96 (MQ=255)
                               cGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGgtgt                                                             >  2:8780468/1‑96 (MQ=255)
                                gggCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCCCCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTc                                                            <  1:13506818/96‑1 (MQ=255)
                                gggCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTc                                                            <  1:7808641/96‑1 (MQ=255)
                                 ggCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCg                                                           <  1:13305696/96‑1 (MQ=255)
                                 ggCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACAAGACACTCGGAGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGGCg                                                           >  1:6146444/1‑96 (MQ=255)
                                    aCCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGttt                                                        <  1:13995614/96‑1 (MQ=255)
                                     tcATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGGGCTGTCTTCCCACAGTTGGCGAGGGAAGACCGCGGCGTCGtttt                                                       >  1:13776316/2‑96 (MQ=255)
                                      cATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                      >  1:912194/1‑96 (MQ=255)
                                        tCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCaa                                                    >  2:7312673/1‑96 (MQ=255)
                                         ccACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAg                                                   <  2:1564240/96‑1 (MQ=255)
                                         ccACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAg                                                   >  2:1276985/1‑96 (MQ=255)
                                         ccACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAg                                                   >  2:13967793/1‑96 (MQ=255)
                                         ccACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGGCGTTTTCAAg                                                   >  1:811787/1‑96 (MQ=255)
                                          cACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGt                                                  <  2:1377844/96‑1 (MQ=255)
                                           aCGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTa                                                 >  2:9945773/1‑96 (MQ=255)
                                           aCGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTa                                                 >  1:10441031/1‑96 (MQ=255)
                                            cGGCAAAATGCCAACGCCATCCGGGAATACTACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTAc                                                <  1:12738634/96‑1 (MQ=255)
                                             ggCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACa                                               >  1:8666879/1‑96 (MQ=255)
                                                aaaaTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAg                                            >  2:3439823/1‑96 (MQ=255)
                                                aaaaTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAg                                            >  2:12303936/1‑96 (MQ=255)
                                                 aaaTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAgg                                           >  1:3237081/1‑96 (MQ=255)
                                                 aaaTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAgg                                           <  2:4912484/96‑1 (MQ=255)
                                                  aaTGCCAACGCCATCCGGGGATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGt                                          >  2:12106898/1‑96 (MQ=255)
                                                  aaTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGt                                          >  1:6715569/1‑96 (MQ=255)
                                                   aTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTg                                         <  2:8086649/96‑1 (MQ=255)
                                                           gCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGAt                                 >  2:10081606/1‑96 (MQ=255)
                                                           gCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGAt                                 >  1:11559055/1‑96 (MQ=255)
                                                           gCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGAt                                 <  2:9488811/96‑1 (MQ=255)
                                                            ccATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATc                                <  1:3575219/96‑1 (MQ=255)
                                                             cATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCa                               >  2:2446847/1‑96 (MQ=255)
                                                              aTCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAg                              >  1:4298945/1‑96 (MQ=255)
                                                              aTCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGCGTCGTTTTCAAGTACATAGGTGAGGGCGATCAg                              <  2:11605373/96‑1 (MQ=255)
                                                               tCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAgg                             <  2:2760461/96‑1 (MQ=255)
                                                                ccGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGt                            <  1:6463414/96‑1 (MQ=255)
                                                                 cGGGAATCCCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGtt                           <  2:6877476/96‑1 (MQ=255)
                                                                   ggAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtgg                         >  2:7925316/1‑96 (MQ=255)
                                                                     aaTACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtggtg                       <  1:7302059/96‑1 (MQ=255)
                                                                     aaTACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtggtg                       >  1:11174396/1‑96 (MQ=255)
                                                                     aaTACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtggtg                       <  2:4015602/96‑1 (MQ=255)
                                                                      aTACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtggtgg                      >  2:2618923/1‑96 (MQ=255)
                                                                       tACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggc                     >  1:9851193/1‑96 (MQ=255)
                                                                       tACCACCAGACACTCGGTGCTGTCTTCCCACAGGTGGCGAGAGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggc                     >  1:5003921/1‑96 (MQ=255)
                                                                         ccaccaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAATAACATAGGTGAGGGTGATCAGGTTGatggcgg                   >  2:1858823/1‑95 (MQ=255)
                                                                         ccaccaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgt                   >  2:13472626/1‑96 (MQ=255)
                                                                          ccccaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtg                  <  2:12544140/94‑1 (MQ=255)
                                                                          caccaGACGCTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtg                  <  1:4769380/96‑1 (MQ=255)
                                                                          caccaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtg                  <  2:11201061/96‑1 (MQ=255)
                                                                          caccaGACACTCGGTGCTGGCTTCTCACAGTTGGCTAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtg                  <  1:3875483/96‑1 (MQ=255)
                                                                             cggACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCa               >  1:11842260/3‑96 (MQ=255)
                                                                             caGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCa               >  2:5198277/1‑96 (MQ=255)
                                                                             caGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCa               >  2:7178892/1‑96 (MQ=255)
                                                                             caGACACGCGGTGCTGTCCTCCCACAGTTGCCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCa               <  1:1440965/96‑1 (MQ=255)
                                                                              aGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAg              >  2:7756299/1‑96 (MQ=255)
                                                                              aGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAg              >  1:2408317/1‑96 (MQ=255)
                                                                              aGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGGGGCAg              >  1:5784433/1‑96 (MQ=255)
                                                                              aGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGACGATCAGGTTGGTGGCGTGGCAg              >  1:12557616/1‑96 (MQ=255)
                                                                                acacTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTg            >  1:4633770/1‑96 (MQ=255)
                                                                                 cacTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGc           <  2:9281049/96‑1 (MQ=255)
                                                                                 cacTCGGTGCTGTCTTCCCACAGTTGGCGACTGAAGTCCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGtac           <  1:10257755/96‑3 (MQ=255)
                                                                                   cTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCAt         <  2:4372338/96‑1 (MQ=255)
                                                                                      ggTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGAt      >  1:2845691/1‑96 (MQ=255)
                                                                                      ggTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGAt      <  2:3125706/96‑1 (MQ=255)
                                                                                       gTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATc     <  1:5648898/96‑1 (MQ=255)
                                                                                        tgctgtCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCa    <  2:8382425/96‑1 (MQ=255)
                                                                                        tgctgtCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCa    >  1:1746663/1‑96 (MQ=255)
                                                                                             |                                                                                            
TGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACC  >  NC_000913/4091258‑4091443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: