Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,108,438 C→A noncoding (56/76 nt) pheV → tRNA‑Phe

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,108,4380CA99.8% 1903.3 / NA 499noncoding (56/76 nt)pheVtRNA‑Phe
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base A (246/251);  total (247/252)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 508 total aligned reads displayed.

TTGACGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAAT  >  NC_000913/3108344‑3108530
                                                                                              |                                                                                            
 ttacgagacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCTCGCGTCCTTGGTTAGa                                                                                            >  1:10582024/3‑96 (MQ=17)
 tgaCGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGa                                                                                            >  1:9687030/1‑96 (MQ=255)
   acgagacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGGAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGAtt                                                                                          <  1:6090743/96‑1 (MQ=255)
     gagacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTcc                                                                                        <  2:3724987/96‑1 (MQ=255)
     gagacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTcc                                                                                        >  2:2978925/1‑96 (MQ=255)
       gacgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGa                                                                                      >  2:8499865/1‑96 (MQ=255)
        acgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAg                                                                                     <  2:7076938/96‑1 (MQ=255)
        acgagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAg                                                                                     <  2:2695849/96‑1 (MQ=255)
          gagGCGTATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                   >  1:12825981/1‑96 (MQ=255)
          gagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAggc                                                                                   >  1:1000017/1‑94 (MQ=255)
          gagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                   >  2:12841980/1‑96 (MQ=255)
          gagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                   >  1:5424910/1‑96 (MQ=255)
          gagGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGGAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTc                                                                                   >  2:6468231/1‑96 (MQ=255)
           agGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTcc                                                                                  <  2:9742709/96‑1 (MQ=255)
           agGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTcc                                                                                  >  1:196333/1‑96 (MQ=255)
            ggCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCg                                                                                 <  1:13501433/96‑1 (MQ=255)
              cGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCggg                                                                               <  2:1927393/96‑1 (MQ=255)
              cGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCggg                                                                               >  1:5809953/1‑96 (MQ=255)
              cGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCggg                                                                               >  2:8793978/1‑96 (MQ=255)
              cGAATCAGGTTTAATGCGCCCCGTGGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCggg                                                                               >  2:5447230/1‑96 (MQ=255)
               gAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGc                                                                              >  1:3765756/1‑96 (MQ=37)
               gAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGc                                                                              >  1:8590915/1‑96 (MQ=37)
               gAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGc                                                                              >  1:7803945/1‑96 (MQ=37)
               gAATCAGGTTTAATGCGCCCCGGTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGGGTCCTTGGTTAGATTCCGAGGCCGGGc                                                                              >  2:10105279/1‑96 (MQ=11)
                 aTCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGcac                                                                            <  1:7066970/96‑1 (MQ=21)
                   cAGGTTTACTGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGcacca                                                                          <  2:796967/96‑1 (MQ=12)
                   cAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGcacca                                                                          <  2:4439922/96‑1 (MQ=17)
                     ggTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACt                                                                        >  1:2413897/1‑96 (MQ=17)
                     ggTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACt                                                                        >  2:12325937/1‑96 (MQ=17)
                     ggTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACt                                                                        >  2:5782588/1‑96 (MQ=17)
                      gTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTa                                                                       >  2:2243404/1‑96 (MQ=18)
                        ttAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTact                                                                     <  1:10799706/96‑3 (MQ=16)
                         tAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAAtt                                                                    <  1:9880370/96‑1 (MQ=255)
                           aTGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCt                                                                  <  1:1798361/96‑1 (MQ=255)
                            tGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCtt                                                                 <  1:11553149/96‑1 (MQ=255)
                                ccccGTTGCCCGGGTAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGa                                                             >  1:10970703/1‑96 (MQ=255)
                                ccccGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGa                                                             <  2:341623/96‑1 (MQ=255)
                                 cccGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGaa                                                            <  2:515665/96‑1 (MQ=255)
                                 cccGTTGCCCGGATAGCACAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGaa                                                            >  2:8227634/1‑96 (MQ=255)
                                  ccGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAAc                                                           >  2:14292677/1‑96 (MQ=255)
                                         ccGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCca                                                    <  2:7615610/96‑1 (MQ=255)
                                          cGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCcac                                                   <  2:4230449/96‑1 (MQ=255)
                                          cGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCcac                                                   >  2:3087886/1‑96 (MQ=255)
                                          cGGATAGCTCAGTCGGTAGAGCAGGGGATTAAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCcac                                                   <  2:14128634/96‑1 (MQ=255)
                                           ggATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCcaca                                                  <  2:6588573/96‑1 (MQ=255)
                                            gATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACaa                                                 <  1:8722564/96‑1 (MQ=255)
                                              tAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTATATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCTCCCACAAgg                                               >  1:11957814/1‑96 (MQ=255)
                                              tAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAgg                                               <  2:3881886/96‑1 (MQ=255)
                                               aacTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGCACTTGGTTAGATTCCGAGGCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGc                                              >  1:10151700/3‑96 (MQ=18)
                                                gCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCg                                             <  2:14009687/96‑1 (MQ=255)
                                                 cTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCgg                                            >  2:1660416/1‑96 (MQ=255)
                                                   cAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGt                                          <  1:4701994/96‑1 (MQ=255)
                                                       cGGTAGAGGAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGttttt                                      >  1:12987865/1‑96 (MQ=255)
                                                         gTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGATTTTGc                                    >  2:12946818/1‑96 (MQ=255)
                                                          tAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCt                                   >  1:2868066/1‑96 (MQ=255)
                                                           agagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCtt                                  >  1:6839094/1‑96 (MQ=255)
                                                           agagCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCtt                                  <  1:6640922/96‑1 (MQ=255)
                                                             agCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCtttt                                >  1:7409324/1‑96 (MQ=255)
                                                             agCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCtttt                                >  1:11183331/1‑96 (MQ=255)
                                                              gCAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTg                               >  1:1478252/1‑96 (MQ=255)
                                                               cAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTgg                              >  1:8973912/1‑96 (MQ=255)
                                                               cAGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTgg                              >  2:10778627/1‑96 (MQ=255)
                                                                aGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                             >  2:12024459/1‑96 (MQ=255)
                                                                aGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                             >  1:9227247/1‑96 (MQ=255)
                                                                aGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                             >  1:44405/1‑96 (MQ=255)
                                                                aGGGGATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                             >  1:1034465/1‑96 (MQ=255)
                                                                aGGGGAGTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGa                             >  2:13707626/1‑96 (MQ=255)
                                                                 ggggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGAt                            <  1:12145471/96‑1 (MQ=255)
                                                                 ggggATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGAt                            >  1:1402549/1‑96 (MQ=255)
                                                                   ggATTGAAAATCCACGTGTCCTTGGTTAGATTCCGAGTCCGGGCCCCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCt                          <  1:4339308/96‑1 (MQ=255)
                                                                    gATTGTAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGCCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTg                         <  2:2442521/96‑1 (MQ=255)
                                                                    gATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTg                         >  2:6126818/1‑96 (MQ=255)
                                                                    gATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTg                         >  1:8403801/1‑96 (MQ=255)
                                                                    gATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTg                         >  1:3364974/1‑96 (MQ=255)
                                                                    gATTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTg                         <  1:11781131/96‑1 (MQ=255)
                                                                     aTTGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGa                        <  1:13364745/96‑1 (MQ=255)
                                                                      ttGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGAc                       <  2:11418182/96‑1 (MQ=255)
                                                                      ttGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGAc                       <  2:9212917/96‑1 (MQ=255)
                                                                      ttGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACAAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGAc                       <  2:4791312/96‑1 (MQ=255)
                                                                       tGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACa                      >  2:1382970/1‑96 (MQ=255)
                                                                       tGAAAATCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACa                      <  1:4928538/96‑1 (MQ=255)
                                                                          aaaTCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACTACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATa                   >  1:12629674/1‑96 (MQ=255)
                                                                          aaaTCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATa                   <  2:13286303/96‑1 (MQ=255)
                                                                          aaaTCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGGTTTTGCTTTTGGATCTGACAATa                   >  2:2094338/1‑96 (MQ=255)
                                                                           aaTCCCCGTGTTCTTGGTTAGATGCCGAGTCCGGGCACCAATAATTCTTAAGAACCCGCCCACAAGGCGGTTTTTTGCTTTTGGATCTGACAAtta                  <  1:14250530/96‑3 (MQ=37)
                                                                             tCCCCGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAAcc                >  1:6251196/1‑96 (MQ=255)
                                                                               cccGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCtt              >  1:13650068/1‑96 (MQ=255)
                                                                               cccATGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCtt              >  2:12569712/1‑96 (MQ=255)
                                                                                ccGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTc             <  1:8145751/96‑1 (MQ=255)
                                                                                ccGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTc             <  1:2727555/96‑1 (MQ=255)
                                                                                 cGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCa            >  2:4087150/1‑96 (MQ=255)
                                                                                 cGTGTCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCa            <  1:3087886/96‑1 (MQ=255)
                                                                                  gtgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCAc           >  2:11011223/1‑96 (MQ=255)
                                                                                  gtgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCAc           >  2:7346696/1‑96 (MQ=255)
                                                                                  gtgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCAc           >  2:10370549/1‑96 (MQ=255)
                                                                                  gtgtCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCAc           >  1:4122214/1‑96 (MQ=255)
                                                                                  gtgtCCTTGGTTAGATTACGAGTCCGGGCACCACTAATTCTTAAGACCCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCAc           <  1:5616247/96‑1 (MQ=255)
                                                                                     tCCTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaa        <  2:13631743/96‑1 (MQ=255)
                                                                                       cTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaa      >  2:11718096/1‑96 (MQ=255)
                                                                                       cTTGGTTAGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGaaaa      >  1:3635232/1‑96 (MQ=255)
                                                                                              |                                                                                            
TTGACGAGACGAGGCGAATCAGGTTTAATGCGCCCCGTTGCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCACTAATTCTTAAGAACCCGCCCACAAGGCGGGTTTTTGCTTTTGGATCTGACAATAACCTTCACGAAAAAAAT  >  NC_000913/3108344‑3108530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: