Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,737,956 2 bp→CG coding (623‑624/1254 nt) avtA → alanine‑alpha‑ketoisovalerate transaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,737,9560GC100.0% 2183.8 / NA 563G208A (GGC→GCG) avtAalanine‑alpha‑ketoisovalerate transaminase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (244/319);  total (244/319)
*NC_0009133,737,9570CG100.0% 2223.6 / NA 563G208A (GGC→GCGavtAalanine‑alpha‑ketoisovalerate transaminase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (244/319);  total (244/319)

Only 100 of 601 total aligned reads displayed.

AAGAAACCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGGCAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATGGAA  >  NC_000913/3737866‑3738046
                                                                                          ||                                                                                         
aagaaACCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATc                                                                                       <  2:12526326/96‑1 (MQ=255)
  gaaACCGGGATGATTTACGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCaa                                                                                     <  1:12780764/96‑1 (MQ=255)
   aaaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAac                                                                                    >  1:11093400/1‑96 (MQ=255)
   aaaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAac                                                                                    >  2:9890885/1‑96 (MQ=255)
   aaaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAAGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAGTCAac                                                                                    >  1:8825587/1‑96 (MQ=255)
    aaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAaca                                                                                   >  1:1121043/1‑96 (MQ=255)
    aaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAaca                                                                                   <  2:5438232/96‑1 (MQ=255)
    aaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAaca                                                                                   >  2:5663027/1‑96 (MQ=255)
    aaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAaca                                                                                   >  2:6913843/1‑96 (MQ=255)
    aaCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACAAAGAGTTGCTGAAGCTTGGCGCCCTGGCGAATCGaca                                                                                   >  1:12333586/1‑96 (MQ=255)
     aCCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGGGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAacac                                                                                  >  2:13292855/1‑96 (MQ=255)
      ccGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACg                                                                                 <  2:12121978/96‑1 (MQ=255)
      ccGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACg                                                                                 <  1:13933296/96‑1 (MQ=255)
       cGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACgg                                                                                <  2:8252724/96‑1 (MQ=255)
       cGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACgg                                                                                <  2:2592499/96‑1 (MQ=255)
        gggATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGc                                                                               <  2:7732367/96‑1 (MQ=255)
        gggATGATGTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGc                                                                               <  2:4544717/96‑1 (MQ=255)
            tgatTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTc                                                                           >  2:11756391/1‑96 (MQ=255)
            tgatTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTc                                                                           <  2:12282044/96‑1 (MQ=255)
             gatTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTcc                                                                          >  2:5836506/1‑96 (MQ=255)
              atTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCg                                                                         <  2:3980639/96‑1 (MQ=255)
               tttGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTGGACGCGCTGGCGAATCAACACGGCATTCCGc                                                                        >  2:1014989/1‑96 (MQ=255)
                 tGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTg                                                                      >  1:9304729/1‑96 (MQ=255)
                 tGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTg                                                                      <  2:88610/96‑1 (MQ=255)
                 tGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTg                                                                      >  2:6364217/1‑96 (MQ=255)
                   catctcCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGt                                                                    >  1:10801131/3‑96 (MQ=255)
                    gTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGtg                                                                   <  2:9521382/96‑1 (MQ=255)
                    gTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGtg                                                                   <  1:5514763/96‑1 (MQ=255)
                     tctcCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCACCACGGCATTCCGCTGGtga                                                                  <  1:2321002/96‑1 (MQ=255)
                          cGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGtgattgat                                                             <  1:1593539/96‑1 (MQ=255)
                           ggCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCGACACGGCATTCCGCTGGtgattgaga                                                            <  1:11448110/96‑3 (MQ=255)
                            gCCGACGAATCCAACAGGCAATGTGATTACTGACGGAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATaa                                                           >  1:2994084/1‑96 (MQ=255)
                             ccGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAAc                                                          <  1:7059437/96‑1 (MQ=255)
                              cgacgaATCCAACAGGCGATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACg                                                         <  1:8341300/96‑1 (MQ=255)
                              cgacgaATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACg                                                         >  1:691550/1‑96 (MQ=255)
                               gacgaATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGc                                                        >  2:8944577/1‑96 (MQ=255)
                                 cgaATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCtt                                                      <  2:13587015/96‑1 (MQ=255)
                                 cgaATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCtt                                                      <  2:2099018/96‑1 (MQ=255)
                                  gaATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAATCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTa                                                     >  2:6623312/1‑96 (MQ=255)
                                  gaATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTa                                                     <  2:8498807/96‑1 (MQ=255)
                                     tCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTAttg                                                  <  1:10639167/96‑3 (MQ=255)
                                      ccAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGc                                                 >  1:7174601/1‑96 (MQ=255)
                                      ccAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGc                                                 <  1:11895776/96‑1 (MQ=255)
                                        aaCAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGt                                               <  1:5938828/96‑1 (MQ=255)
                                        aaCAGGCAATGTGATTACTGACGAAGAGGTGCTGAAGCTTGACGCGCTGGGGAAGCAACACGGCGTTGCGCTGGGGCTGGATAACGCTTATGGCGt                                               >  1:5752905/1‑96 (MQ=255)
                                         aCAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTc                                              <  1:9715357/96‑1 (MQ=255)
                                         aCAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTc                                              <  2:6214207/96‑1 (MQ=255)
                                          cAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTcc                                             >  1:860916/1‑96 (MQ=255)
                                           aGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTccc                                            <  2:313006/96‑1 (MQ=255)
                                            ggCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACTCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCg                                           >  1:10141456/1‑96 (MQ=255)
                                            ggCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCg                                           <  2:10428785/96‑1 (MQ=255)
                                            ggCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCg                                           >  2:10943176/1‑96 (MQ=255)
                                            ggCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCg                                           <  2:3392706/96‑1 (MQ=255)
                                             gCAATTTGATTACTGACGCAGAGTTTCAGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGCTTATTCATAACGCTTATGGCGTCCCGt                                          <  2:13726053/96‑1 (MQ=255)
                                             gCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGt                                          <  2:5317353/96‑1 (MQ=255)
                                             gCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGt                                          <  1:10362068/96‑1 (MQ=255)
                                               aaTGTTATTACTCACGAAGAGTTGCTCAAGCTTGACGCGCTGACGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTc                                        <  1:7904719/96‑1 (MQ=255)
                                               aaTGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTc                                        >  1:4650840/1‑96 (MQ=255)
                                                aTGTGATTACTGACGGAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTcc                                       >  2:13013916/1‑96 (MQ=255)
                                                aTGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTcc                                       <  1:7756324/96‑1 (MQ=255)
                                                 tgtgATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGCCCCGTTccc                                      <  1:2592716/96‑1 (MQ=255)
                                                  gtgATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCg                                     >  1:14235043/1‑96 (MQ=255)
                                                    gATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCggg                                   <  2:6044371/96‑1 (MQ=255)
                                                    gATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCggg                                   >  2:2866786/1‑96 (MQ=255)
                                                    gATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCggg                                   >  2:14144583/1‑96 (MQ=255)
                                                       tACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTat                                >  1:6647323/1‑96 (MQ=255)
                                                         cTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTatca                              >  1:446690/1‑96 (MQ=255)
                                                            aCGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCt                           <  2:911706/96‑1 (MQ=255)
                                                            aCGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCt                           <  1:2131803/96‑1 (MQ=255)
                                                             cGAAGAGTTTCTGAAGCTTGACGCGCTGGCGAATCAACACTGCATTCCGCTGGTGATTTATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCtt                          <  1:9077628/96‑1 (MQ=255)
                                                             cGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCtt                          <  2:1121043/96‑1 (MQ=255)
                                                              gAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTc                         >  1:13705891/1‑96 (MQ=255)
                                                              gAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTc                         >  2:1458265/1‑96 (MQ=255)
                                                                agagTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTatcatc                            <  1:336903/91‑1 (MQ=255)
                                                                agagTTGCTGAAGCGTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAg                       <  2:12726485/96‑1 (MQ=255)
                                                                 gagTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGt                      >  2:3713022/1‑96 (MQ=255)
                                                                 gagTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGt                      <  2:1744540/96‑1 (MQ=255)
                                                                 gagGTGCTGAACGTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGt                      <  2:4225948/96‑1 (MQ=255)
                                                                   gTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGa                    <  1:3939356/96‑1 (MQ=255)
                                                                    ttGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGaa                   <  2:13864004/96‑1 (MQ=255)
                                                                     tGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAg                  <  1:6310757/96‑1 (MQ=255)
                                                                      gCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGGTTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAgc                 <  2:11931045/96‑1 (MQ=255)
                                                                      gCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAgc                 <  1:11703633/96‑1 (MQ=255)
                                                                        tGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAgcgc               <  2:7064700/96‑1 (MQ=255)
                                                                        tGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAgcgc               >  1:13078634/1‑96 (MQ=255)
                                                                        tGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAgcgc               <  2:10801131/96‑1 (MQ=255)
                                                                             cTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCg          <  1:13322666/96‑1 (MQ=255)
                                                                              ttGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGc         >  2:233210/1‑96 (MQ=255)
                                                                               tGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCt        <  1:3555364/96‑1 (MQ=255)
                                                                               tGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCt        >  2:13067655/1‑96 (MQ=255)
                                                                                gACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTa       <  2:12400926/96‑1 (MQ=255)
                                                                                 aCGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTAt      <  1:4241501/96‑1 (MQ=255)
                                                                                  cgcgCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATg     >  2:4921275/1‑96 (MQ=255)
                                                                                   gcgcTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAATCGCGCCCGCTATgg    >  1:502184/1‑96 (MQ=255)
                                                                                   gcgcTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATgg    >  2:4663898/1‑96 (MQ=255)
                                                                                   gcgcTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATgg    >  1:9955701/1‑96 (MQ=255)
                                                                                   gagcTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATgg    >  1:7352221/3‑96 (MQ=255)
                                                                                    cgcTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATGGa   <  1:2760177/96‑1 (MQ=255)
                                                                                    cgcTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGGATCATCTTCAGTGAAGCGCGCCCGCTATGGa   >  1:1836926/1‑96 (MQ=255)
                                                                                     gcTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATGGaa  >  2:7257184/1‑96 (MQ=255)
                                                                                          ||                                                                                         
AAGAAACCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGGCAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATGGAA  >  NC_000913/3737866‑3738046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: