Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,236,758 Δ1 bp coding (537/966 nt) ygjT → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,236,7570T.100.0% 1519.2 / NA 327coding (536/966 nt)ygjTputative transport protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (163/164);  total (163/164)

Only 100 of 363 total aligned reads displayed.

GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTA  >  NC_000913/3236666‑3236845
                                                                                            |                                                                                        
gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt                                                                                          <  2:5531179/93‑1 (MQ=255)
  cTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtca                                                                                        >  2:1427020/1‑91 (MQ=255)
  cTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtca                                                                                        >  1:5793456/1‑91 (MQ=255)
   ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                                       >  2:813299/1‑90 (MQ=255)
   ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                                       >  1:3679331/1‑90 (MQ=255)
    tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcatt                                                                                      <  2:4850298/93‑5 (MQ=255)
    tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcatt                                                                                      <  1:2684584/93‑5 (MQ=255)
     ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCAttt                                                                                    <  1:1141441/93‑1 (MQ=255)
     ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCAttt                                                                                    >  2:378371/1‑93 (MQ=255)
      ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTg                                                                                   >  1:5352711/1‑93 (MQ=255)
       tgctgTTTACCGGCGTGAAGATGGAGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTgc                                                                                  >  2:8450559/1‑93 (MQ=255)
        gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTgcg                                                                                 >  2:723990/1‑93 (MQ=255)
        gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTgcg                                                                                 <  1:6924889/93‑1 (MQ=255)
         ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTgcgc                                                                                >  1:6121334/1‑93 (MQ=255)
         ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTgcgc                                                                                <  2:8284665/93‑1 (MQ=255)
          tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCa                                                                               >  1:7262639/1‑93 (MQ=255)
          tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCa                                                                               >  2:3850580/1‑93 (MQ=255)
           gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCAt                                                                              <  2:7726872/93‑1 (MQ=255)
           gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCAt                                                                              >  1:8082889/1‑93 (MQ=255)
           gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCAt                                                                              >  2:4311370/1‑93 (MQ=255)
           gTTTACCGGCGCGAAAATGGCGCCCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGCCATTTGCGCAt                                                                              >  2:6028649/1‑93 (MQ=255)
            tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATg                                                                             <  2:8532360/93‑1 (MQ=255)
              tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGAc                                                                           <  2:5162334/93‑1 (MQ=255)
              tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGAc                                                                           <  1:8647915/93‑1 (MQ=255)
              tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGAc                                                                           >  2:7124827/1‑93 (MQ=255)
                 cGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCgc                                                                        >  1:3442699/1‑92 (MQ=255)
                 cGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGACATTTGCGCATGACCgc                                                                        >  2:6631748/1‑92 (MQ=255)
                  ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGac                                                                       <  2:6241772/93‑1 (MQ=255)
                    cGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGacac                                                                     <  1:8563781/93‑1 (MQ=255)
                      tGAAGATGGCGCTCGCCCATGAATATTAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCTGTCATTTGCGCATGACCGACACCa                                                                   <  2:2770347/93‑1 (MQ=255)
                      tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCa                                                                   >  2:3409774/1‑93 (MQ=255)
                      tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCa                                                                   <  1:6802410/93‑1 (MQ=255)
                       gAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCAt                                                                  <  2:3681723/93‑1 (MQ=255)
                        aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATc                                                                 <  2:1585718/93‑1 (MQ=255)
                        aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATc                                                                 >  2:2508122/1‑93 (MQ=255)
                        aaGATGGCCCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATc                                                                 <  2:2120772/93‑1 (MQ=255)
                          gATGGCGCTCGCCCATGAAGATGAAGCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGa                                                               <  2:2635276/93‑1 (MQ=255)
                             ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACaa                                                            <  1:2151477/93‑1 (MQ=255)
                             ggCGCTCGCCCATGAAGATAAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACaa                                                            <  2:6505007/93‑1 (MQ=255)
                               cgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACg                                                          >  1:7784356/1‑93 (MQ=255)
                                gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGa                                                         <  1:645562/93‑1 (MQ=255)
                                gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGa                                                         >  1:722313/1‑93 (MQ=255)
                                 cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCGTTTGCGCATGACCGACACCATCGACAACGAg                                                        >  1:106800/1‑93 (MQ=255)
                                 cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTAATTTGCGCATGACCGACACCATCGACAACGAg                                                        >  1:3538830/1‑93 (MQ=255)
                                  tCGCCCAGGAATATGGATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGc                                                       <  2:5852263/93‑1 (MQ=255)
                                   cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCa                                                      <  1:4704202/93‑1 (MQ=255)
                                   cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCa                                                      >  1:3081761/1‑93 (MQ=255)
                                    gCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAt                                                     >  1:1286872/1‑93 (MQ=255)
                                     cccATGAAGATGAATCAGGCTTTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                                                    <  2:7630686/93‑1 (MQ=255)
                                     cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                                                    >  1:915683/1‑93 (MQ=255)
                                     cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                                                    >  1:6237862/1‑93 (MQ=255)
                                      ccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAttt                                                   >  2:1734480/1‑93 (MQ=255)
                                      ccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAttt                                                   >  1:5035391/1‑93 (MQ=255)
                                        aTGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt                                                 >  2:7404169/1‑93 (MQ=255)
                                          aaaaaTGAATCAGGCATAGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                                               <  1:6675578/89‑1 (MQ=255)
                                           aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              >  2:1039638/1‑93 (MQ=255)
                                           aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              <  1:1392047/93‑1 (MQ=255)
                                           aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              <  1:2438247/93‑1 (MQ=255)
                                           aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              >  1:3816871/1‑93 (MQ=255)
                                           aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              >  2:4522010/1‑93 (MQ=255)
                                           aaGATGAATCAGGCATGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              <  1:7713495/93‑1 (MQ=255)
                                           aaGATGAATCAGCCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              <  1:4866213/93‑1 (MQ=255)
                                            aGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                                             <  1:5573669/93‑1 (MQ=255)
                                            aGATGAATCACGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                                             <  2:3008116/93‑1 (MQ=255)
                                             gATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                                            <  1:3979804/93‑1 (MQ=255)
                                             gATGAATCAGGCATTGGCGACAAGCCGCTGGTGCACTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                                            >  2:5004443/1‑93 (MQ=255)
                                               tGAATCAGGCATGGGCGAAAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCg                                          <  1:7053044/93‑1 (MQ=255)
                                                 aaTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa                                        >  1:5955088/1‑93 (MQ=255)
                                                    cAGGCATGGGGGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa                                     <  1:1563109/93‑1 (MQ=255)
                                                      ggCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt                                   <  1:4098168/93‑1 (MQ=255)
                                                      ggCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt                                   <  1:2570091/93‑1 (MQ=255)
                                                       gCATTGGGGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg                                  <  1:1876596/93‑1 (MQ=255)
                                                       gCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg                                  <  2:2913702/93‑1 (MQ=255)
                                                         aTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa                                <  1:5406769/93‑1 (MQ=255)
                                                         aTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa                                >  1:6351316/1‑93 (MQ=255)
                                                          ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt                               <  2:4370725/93‑1 (MQ=255)
                                                          ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt                               >  1:43925/1‑93 (MQ=255)
                                                           tGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt                              >  2:5285277/1‑93 (MQ=255)
                                                             gCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc                            <  2:8630992/93‑1 (MQ=255)
                                                             gCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc                            <  2:1307914/93‑1 (MQ=255)
                                                              cGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCt                           <  1:1673442/93‑1 (MQ=255)
                                                               gACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTg                          >  2:2311510/1‑93 (MQ=255)
                                                                aCAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt                         >  1:5881718/1‑93 (MQ=255)
                                                                    gccgcTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGc                     <  2:8797060/91‑1 (MQ=255)
                                                                     ccgcTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGcc                    <  2:6171695/92‑1 (MQ=255)
                                                                       gcTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCcac                  >  2:6361465/1‑93 (MQ=255)
                                                                        cTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCcaca                 >  2:3610565/1‑93 (MQ=255)
                                                                            tGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGc             >  2:4066814/1‑93 (MQ=255)
                                                                            tGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGc             <  2:3210451/93‑1 (MQ=255)
                                                                             gcgcTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCt            >  1:4185772/1‑93 (MQ=255)
                                                                             gcgcTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCt            <  1:3316074/93‑1 (MQ=255)
                                                                              cgcTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTg           >  1:8327114/1‑93 (MQ=255)
                                                                               gcTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGa          <  1:8189285/93‑1 (MQ=255)
                                                                                cTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGAt         <  2:5409741/93‑1 (MQ=255)
                                                                                 tGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATg        >  2:1998021/1‑93 (MQ=255)
                                                                                  ggCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGc       <  2:4631484/93‑1 (MQ=255)
                                                                                   gCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCt      <  1:2832833/93‑1 (MQ=255)
                                                                                   gCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCt      >  2:7939790/1‑93 (MQ=255)
                                                                                   gCTACGCGGCCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCCGATGCt      >  1:4304384/1‑93 (MQ=255)
                                                                                     tACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTGTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTgg    <  1:3230052/93‑1 (MQ=255)
                                                                                            |                                                                                        
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTA  >  NC_000913/3236666‑3236845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: