Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,253,742 Δ1 bp coding (551/552 nt) yhaNM ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,253,7410G.99.7% 1465.8 / ‑3.6 318coding (552/552 nt)yhaNMhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base . (171/146);  minor base C (1/0);  total (172/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 346 total aligned reads displayed.

ATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGA  >  NC_000913/3253649‑3253829
                                                                                            |                                                                                        
 tAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgt                                                                                         <  2:1545247/93‑2 (MQ=255)
   aCGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgttc                                                                                       <  1:5303087/93‑4 (MQ=255)
    cGCACAATTTAGCTTCGCGGAATGGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgttct                                                                                      <  2:4793452/93‑5 (MQ=255)
    cGCACAATTTAGCTGCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCgttct                                                                                      <  2:511703/93‑5 (MQ=255)
     gCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAACCGGGACTTCATTTACGAACATTAGGCTCTCAGCCAGCGTCGTTCTg                                                                                    >  1:1223573/1‑93 (MQ=255)
       acaATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGa                                                                                  <  1:1162759/93‑1 (MQ=255)
        caATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGTGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGaa                                                                                 <  1:5440636/93‑1 (MQ=255)
         aaTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCACCCAGCGTCGTTCTGGaaa                                                                                >  1:3858775/1‑93 (MQ=255)
          aTTTAGGTTCGCGTAATCGAGAATAATGCGGATCGCCGCAAACGGGCCTTCATTGACGCGCTTCCGGATCTCAGCCAGCGTCGTTCTGGAAAg                                                                               <  2:2790433/93‑1 (MQ=255)
          aTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCACACGGGACTTCATTGTCGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAg                                                                               >  2:5397805/1‑93 (MQ=255)
            ttAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCa                                                                             >  1:2442486/1‑93 (MQ=255)
               gcgtCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCg                                                                          <  2:5355241/90‑1 (MQ=255)
                cTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGt                                                                         <  2:4895361/93‑1 (MQ=255)
                 ttCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTc                                                                        <  1:2274118/93‑1 (MQ=255)
                    gcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGc                                                                     <  1:6942665/93‑1 (MQ=255)
                    gcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGc                                                                     <  2:7429669/93‑1 (MQ=255)
                     cgGAATCGAGAATAAAGCGGATCGCCGCAAACGCGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCg                                                                    <  2:81626/93‑1 (MQ=255)
                        aaTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGgag                                                                 >  1:6208660/1‑93 (MQ=255)
                         aTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGgaga                                                                >  2:1789228/1‑93 (MQ=255)
                         aTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGgaga                                                                >  1:1565836/1‑93 (MQ=255)
                          tCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGAc                                                               >  2:4079831/1‑93 (MQ=255)
                          tCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGAc                                                               >  2:3501428/1‑93 (MQ=255)
                            gagaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGActc                                                             >  1:4760350/1‑93 (MQ=255)
                             agaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGActct                                                            <  2:4554170/93‑1 (MQ=255)
                             agaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGActct                                                            >  1:5531510/1‑93 (MQ=255)
                              gaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCtt                                                           >  1:2025261/1‑93 (MQ=255)
                              gaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCtt                                                           >  1:7721341/1‑93 (MQ=255)
                              gaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCtt                                                           <  2:2395658/93‑1 (MQ=255)
                              gaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCtt                                                           <  2:2213751/93‑1 (MQ=255)
                               aaTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTg                                                          >  1:5712166/1‑93 (MQ=255)
                                aTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGc                                                         >  2:2366676/1‑93 (MQ=255)
                                aTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGc                                                         <  1:6271767/93‑1 (MQ=255)
                                     gCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGcc                                                    <  1:2324772/93‑1 (MQ=255)
                                       ggATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCct                                                  >  1:7215310/1‑93 (MQ=255)
                                        gagcgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGCCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCctc                                                 >  2:7829695/4‑93 (MQ=255)
                                        gATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCctc                                                 <  1:2632541/93‑1 (MQ=255)
                                        gATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCctc                                                 >  1:4269515/1‑93 (MQ=255)
                                          tCGCCGCAAACGGGACTTAATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTg                                               >  2:7710734/1‑93 (MQ=255)
                                           cgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGc                                              <  1:1070850/93‑1 (MQ=255)
                                            gccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGcc                                             >  1:951906/1‑93 (MQ=255)
                                             ccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCca                                            >  1:3144570/1‑93 (MQ=255)
                                              cgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGTTCGCCCTCTGCcac                                           >  1:6736470/1‑93 (MQ=255)
                                               gcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCcaca                                          >  1:6563898/1‑93 (MQ=255)
                                               gcAAACGGGACTTCATTGACGAAATTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCACTCTGCcacc                                          >  2:3169730/1‑92 (MQ=255)
                                                cAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGAACCGTCAGCGGAGACTCTTCCTCGCCCTCTGCcaccc                                         >  1:2842430/1‑91 (MQ=255)
                                                 aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCcacaca                                        >  1:8104317/1‑93 (MQ=255)
                                                 aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCcacaca                                        >  1:8692340/1‑93 (MQ=255)
                                                 aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCcacaca                                        >  1:5786921/1‑93 (MQ=255)
                                                   aCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACg                                      >  1:3202678/1‑93 (MQ=255)
                                                    cGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGc                                     <  1:7544446/93‑1 (MQ=255)
                                                     gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACAcccc                                    >  2:7264405/1‑93 (MQ=255)
                                                     gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGcc                                    >  2:761542/1‑93 (MQ=255)
                                                     gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGcc                                    <  1:2984532/93‑1 (MQ=255)
                                                     gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGcc                                    >  1:6016984/1‑93 (MQ=255)
                                                      ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCct                                   >  2:5609477/1‑93 (MQ=255)
                                                      ggACTTCATTAACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGCAAGCACCGTCAGCGGAGCCTCTTGCTCGCCCTCTGACACACACGCct                                   >  1:7332659/1‑93 (MQ=255)
                                                       gACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctg                                  >  1:8470812/1‑93 (MQ=255)
                                                        aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCGCCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgc                                 <  1:6055807/93‑1 (MQ=255)
                                                        aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgc                                 >  1:63087/1‑93 (MQ=255)
                                                        aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgc                                 <  2:4433057/93‑1 (MQ=255)
                                                        aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgc                                 >  2:6750553/1‑93 (MQ=255)
                                                        aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgc                                 >  2:6988225/1‑93 (MQ=255)
                                                        aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgc                                 >  2:8305783/1‑93 (MQ=255)
                                                          ttCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgctg                               <  2:5174286/93‑1 (MQ=255)
                                                          ttCATGGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCctgctg                               <  1:2737991/93‑1 (MQ=255)
                                                           tCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTgg                              <  2:908542/93‑1 (MQ=255)
                                                           tCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTgg                              >  1:654018/1‑93 (MQ=255)
                                                            cATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTggg                             >  2:1265685/1‑93 (MQ=255)
                                                            cATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTCCCACACACGCCTGCTggg                             >  2:403011/1‑93 (MQ=255)
                                                              ttGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTa                           >  2:3935789/1‑93 (MQ=255)
                                                               tGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTaa                          <  1:2070496/93‑1 (MQ=255)
                                                                    aaCTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACAAAGGCCTGCTGGGTAaccacc                     >  1:4408168/1‑93 (MQ=255)
                                                                       ttCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCATCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAacaccaca                  >  1:1361181/1‑93 (MQ=255)
                                                                        tCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAacaccacac                 <  1:8776263/93‑1 (MQ=255)
                                                                         cAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAacancacacc                <  1:5119883/93‑1 (MQ=255)
                                                                          aGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGATCGCCCTCTGCCACACACGCCTGCTGGGTAAAcaccacacca               >  2:4248961/1‑93 (MQ=255)
                                                                          aGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTGCTCGCCCTCTGCCACACACGCCCTCGGGGGTAACACCACACCAt              >  2:3624193/1‑93 (MQ=255)
                                                                           ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCAt              >  2:2921791/1‑93 (MQ=255)
                                                                           ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCAt              <  1:642615/93‑1 (MQ=255)
                                                                           ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACAAt              >  1:8528513/1‑93 (MQ=255)
                                                                            gATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATc             <  1:3464019/93‑1 (MQ=255)
                                                                             aTCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCg            >  2:4281908/1‑93 (MQ=255)
                                                                               ctcAGCCAGCGTCGTTCTGGAAATCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTg          <  2:5994713/93‑1 (MQ=255)
                                                                               ctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTg          >  1:4538457/1‑93 (MQ=255)
                                                                               ctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGACTGCTGGGTAAACACCACACCATCGTg          >  2:1932616/1‑93 (MQ=255)
                                                                                tcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc         >  2:5747345/1‑93 (MQ=255)
                                                                                tcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc         <  1:3795319/93‑1 (MQ=255)
                                                                                tcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc         <  2:692179/93‑1 (MQ=255)
                                                                                tcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc         <  2:3709143/93‑1 (MQ=255)
                                                                                tcAGCCAGCGTCGTGCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc         <  2:2058412/93‑1 (MQ=255)
                                                                                    ccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtct     <  2:106252/93‑1 (MQ=255)
                                                                                    ccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCAACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtct     <  2:2696485/93‑1 (MQ=255)
                                                                                     cagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtctc    >  2:6405472/1‑93 (MQ=255)
                                                                                     cagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtctc    <  2:7050771/93‑1 (MQ=255)
                                                                                     cagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtctc    <  1:1625173/93‑1 (MQ=255)
                                                                                      agcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCg   >  2:3087134/1‑93 (MQ=255)
                                                                                       gcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtc      <  2:1013322/89‑1 (MQ=255)
                                                                                       gcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtc      >  1:1013322/1‑89 (MQ=255)
                                                                                       gcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGa  <  2:7967357/93‑1 (MQ=255)
                                                                                       gcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGa  >  2:8734108/1‑93 (MQ=255)
                                                                                            |                                                                                        
ATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGA  >  NC_000913/3253649‑3253829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: