Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,873,627 Δ1 bp coding (506/672 nt) yidX → putative replicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,873,6250G.100.0% 1702.6 / NA 364coding (504/672 nt)yidXputative replicase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (188/176);  total (188/176)

Only 100 of 396 total aligned reads displayed.

AAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTA  >  NC_000913/3873533‑3873713
                                                                                            |                                                                                        
  aaaTAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCgga                                                                                        <  1:828533/93‑2 (MQ=255)
  aaaTAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCgga                                                                                        <  2:3221510/93‑2 (MQ=255)
  aaaTAAAAACATGGATTACGCAAAGATGATGTCTTCCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCgga                                                                                        <  2:6272025/93‑2 (MQ=255)
   aaTAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCggat                                                                                       <  1:7042962/93‑3 (MQ=255)
    aTAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCggatg                                                                                      <  1:4606599/93‑4 (MQ=255)
     tAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCggatgg                                                                                     <  2:2178599/93‑5 (MQ=255)
     tAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCggatgg                                                                                     <  1:7159243/93‑5 (MQ=255)
       aaaaCATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGgtg                                                                                  >  2:101370/1‑93 (MQ=255)
         aaCATGGATTACTCAAAGGTGATGGCGTTCTATCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGtt                                                                                >  2:234265/1‑93 (MQ=255)
         aaCATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGtt                                                                                >  1:5907652/1‑93 (MQ=255)
         aaCATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGtt                                                                                >  1:5219812/1‑93 (MQ=255)
         aaCATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGtt                                                                                <  1:8449353/93‑1 (MQ=255)
         aaCATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGtt                                                                                >  1:7476611/1‑93 (MQ=255)
          aCATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGttt                                                                               >  1:3411884/1‑93 (MQ=255)
          aCATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGttt                                                                               <  2:4367492/93‑1 (MQ=255)
           cATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGGATACTATTCACCCAGAGGCATTCCGGATGGTGTTTc                                                                              >  2:4270787/1‑93 (MQ=255)
           cATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTc                                                                              <  1:5034213/93‑1 (MQ=255)
           cATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTc                                                                              >  2:830961/1‑93 (MQ=255)
            aTGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTcc                                                                             >  1:6488115/1‑93 (MQ=255)
            aTGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTcc                                                                             >  2:685955/1‑93 (MQ=255)
             tGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCg                                                                            >  1:1984994/1‑93 (MQ=255)
               gATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCgca                                                                          >  2:1271428/1‑93 (MQ=255)
                 ttACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCgcagc                                                                        <  1:2615963/93‑1 (MQ=255)
                  tACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCgcagca                                                                       <  1:1150578/93‑1 (MQ=255)
                  tACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCgcagca                                                                       <  2:1846908/93‑1 (MQ=255)
                   aCTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGATTACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCAt                                                                      <  2:5511451/93‑1 (MQ=255)
                   aCTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCAt                                                                      <  2:6545084/93‑1 (MQ=255)
                    cTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCAtt                                                                     <  1:7681244/93‑1 (MQ=255)
                    cTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCAtt                                                                     <  2:4411315/93‑1 (MQ=255)
                    cTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCAtt                                                                     >  1:8175711/1‑93 (MQ=255)
                      cAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTAc                                                                   >  2:4650896/1‑93 (MQ=255)
                       aaaGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACt                                                                  >  1:2923921/1‑93 (MQ=255)
                        aaGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTg                                                                 >  1:6964903/1‑93 (MQ=255)
                        aaGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTg                                                                 >  1:6718448/1‑93 (MQ=255)
                          ggTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGcc                                                               >  1:2734458/1‑93 (MQ=255)
                           gTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCa                                                              <  2:7096559/93‑1 (MQ=255)
                           gTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCa                                                              <  2:1718722/93‑1 (MQ=255)
                             gATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGt                                                            <  2:8010496/93‑1 (MQ=255)
                              aTGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTg                                                           >  2:4019108/1‑93 (MQ=255)
                                  cGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTg                                                       <  1:1035574/93‑1 (MQ=255)
                                  cGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTg                                                       <  1:949077/93‑1 (MQ=255)
                                   gTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGt                                                      <  2:4190325/93‑1 (MQ=255)
                                    ttCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGtt                                                     >  2:5364340/1‑93 (MQ=255)
                                     tCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTa                                                    <  1:8793097/93‑1 (MQ=255)
                                        aCCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGc                                                 <  1:5416813/93‑1 (MQ=255)
                                         ccatccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCt                                                <  1:7947532/93‑1 (MQ=255)
                                         ccatccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCt                                                <  2:8074447/93‑1 (MQ=255)
                                         ccatccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCt                                                <  1:3471745/93‑1 (MQ=255)
                                         ccatccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCt                                                <  2:1549994/93‑1 (MQ=255)
                                          catccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTg                                               <  2:789731/93‑1 (MQ=255)
                                          catccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTg                                               >  2:7174322/1‑93 (MQ=255)
                                          catccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTg                                               >  2:6956443/1‑93 (MQ=255)
                                           atccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCATCATTACTGCCAGTGACTGTTACGCTgg                                              <  1:1179014/93‑1 (MQ=255)
                                           atccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATACCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTgg                                              >  1:2333220/1‑93 (MQ=255)
                                            tccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGa                                             >  2:2484502/1‑93 (MQ=255)
                                             ccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAc                                            >  1:6886862/1‑93 (MQ=255)
                                             ccatTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAc                                            <  2:5465077/93‑1 (MQ=255)
                                              catTTAAAGTGCGATTTTATGAATACTAGTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAca                                           <  2:6717378/93‑1 (MQ=255)
                                                 ttAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAcatca                                        <  2:603859/93‑1 (MQ=255)
                                                 ttAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGAcatca                                        <  1:5816695/93‑1 (MQ=255)
                                                    aaGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTa                                     >  2:5619843/1‑93 (MQ=255)
                                                    aaGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTa                                     >  2:8823206/1‑93 (MQ=255)
                                                    aaGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTa                                     >  1:3896336/1‑93 (MQ=255)
                                                    aaGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTa                                     <  2:342032/93‑1 (MQ=255)
                                                       tGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTg                                  >  2:5810312/1‑93 (MQ=255)
                                                         ctaTTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCa                                <  2:6389370/91‑1 (MQ=255)
                                                          gATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCAc                               <  1:7556634/93‑1 (MQ=255)
                                                            ttttATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCg                             >  1:4235871/1‑93 (MQ=255)
                                                              ttATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCt                           <  2:8645288/93‑1 (MQ=255)
                                                              ttATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCt                           <  1:3031572/93‑1 (MQ=255)
                                                                aTGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGc                         <  2:6173729/93‑1 (MQ=255)
                                                                aTGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGc                         >  2:5983242/1‑93 (MQ=255)
                                                                aTGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGc                         >  1:4707170/1‑93 (MQ=255)
                                                                 tGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCa                        >  2:7824514/1‑93 (MQ=255)
                                                                     tACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAAttt                    >  1:7289618/1‑93 (MQ=255)
                                                                       cTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCt                  <  1:1527530/93‑1 (MQ=255)
                                                                        tATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTg                 >  1:1724881/1‑93 (MQ=255)
                                                                        tATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTg                 >  1:5490895/1‑93 (MQ=255)
                                                                         aTTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTgg                <  1:3111271/93‑1 (MQ=255)
                                                                         aTTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTgg                >  2:8422384/1‑93 (MQ=255)
                                                                          ttCCCCCAGAGGCATTCCGGATGGGGTGGCCGCAGCATTACTGCCAGTGACTGTTACGCGGGACATCATTACTGCACCGCTGCAATTTCTGGt               <  1:6110846/93‑1 (MQ=255)
                                                                          ttCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGt               <  2:1946597/93‑1 (MQ=255)
                                                                           tCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGtt              >  1:3287403/1‑93 (MQ=255)
                                                                           tCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGtt              >  2:2869390/1‑93 (MQ=255)
                                                                            cACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCCCCGCTGCAATTTCTGGTTg             <  1:1378565/93‑1 (MQ=255)
                                                                            cACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTg             >  2:4820027/1‑93 (MQ=255)
                                                                             aCCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGt            >  1:2529102/1‑93 (MQ=255)
                                                                             aCCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGt            >  1:4874298/1‑93 (MQ=255)
                                                                               ccAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGtat          >  1:4076818/1‑93 (MQ=255)
                                                                                cAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGtata         <  1:1584846/93‑1 (MQ=255)
                                                                                cAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGtata         <  1:4760991/93‑1 (MQ=255)
                                                                                 agagGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTatat        <  1:7845665/93‑1 (MQ=255)
                                                                                 agagGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTatat        >  1:6314188/1‑93 (MQ=255)
                                                                                 agagGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTatat        <  2:3532151/93‑1 (MQ=255)
                                                                                  gagGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATg       >  1:8648108/1‑93 (MQ=255)
                                                                                   agGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTCGTTGTATATGc      >  2:4939894/1‑93 (MQ=255)
                                                                                    ggCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCa     >  1:4428430/1‑93 (MQ=255)
                                                                                     gCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAg    <  2:7322360/93‑1 (MQ=255)
                                                                                     gCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAg    <  2:4069981/93‑1 (MQ=255)
                                                                                       aTTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTa  >  2:7629908/1‑93 (MQ=255)
                                                                                            |                                                                                        
AAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTA  >  NC_000913/3873533‑3873713

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: