Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,941,734 Δ1 bp noncoding (409/2906 nt) rrlC → 23S ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,941,7340A.96.5% 325.3 / 16.1 197noncoding (409/2906 nt)rrlC23S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base . (107/83);  minor base G (3/4);  total (110/87)
Fisher's exact test for biased strand distribution p-value = 7.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01

Only 100 of 218 total aligned reads displayed.

GATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG  >  NC_000913/3941644‑3941799
                                                                                          |                                                                 
gATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgggggg                                                                 >  2:5685899/1‑93 (MQ=25)
gATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgggggg                                                                 >  2:4909783/1‑93 (MQ=18)
gATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgggggg                                                                 <  2:4669393/93‑1 (MQ=18)
 aTACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATggggggc                                                                >  2:8480651/1‑92 (MQ=25)
  tACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATggggggcc                                                               >  2:1916439/1‑91 (MQ=255)
  tACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGAc                                                              >  1:1286127/1‑93 (MQ=12)
  tACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGAc                                                              >  2:7250552/1‑93 (MQ=12)
  tACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGAc                                                              >  2:1876765/1‑93 (MQ=16)
   aCAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGAcc                                                             >  2:7752725/1‑93 (MQ=16)
    cAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa                                                            >  1:4011161/1‑93 (MQ=16)
    cAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa                                                            >  1:255043/1‑93 (MQ=16)
    cAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa                                                            <  2:2682814/93‑1 (MQ=9)
     aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAt                                                           >  2:4246472/1‑93 (MQ=9)
     aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAt                                                           >  2:182137/1‑93 (MQ=16)
      gggTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtc                                                          >  2:2094781/1‑93 (MQ=16)
      gggTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtc                                                          >  2:5652090/1‑93 (MQ=16)
      gggTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtc                                                          >  1:8231915/1‑93 (MQ=16)
       ggTGACAGCCCCGTACACAAAAATGCACGTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAGGGGGGGACCAtcc                                                         >  1:1153214/1‑93 (MQ=11)
       ggTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcc                                                         <  1:3278435/93‑1 (MQ=9)
        gTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGTCCAtcct                                                        >  1:6679362/1‑93 (MQ=9)
         tGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctc                                                       <  2:8775958/93‑1 (MQ=9)
         tGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctc                                                       <  2:6505511/93‑1 (MQ=9)
         tGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctc                                                       >  2:5569674/1‑93 (MQ=12)
         tGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctc                                                       >  2:4361832/1‑93 (MQ=16)
         tGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctc                                                       <  2:3683498/93‑1 (MQ=9)
          gACATCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCAtcctc                                                       >  2:7896866/1‑93 (MQ=255)
          gACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctcc                                                      >  1:6779460/1‑93 (MQ=12)
           aCAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCa                                                     >  2:1443075/1‑93 (MQ=9)
            cAGCCCCTTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCaa                                                    <  1:684631/93‑1 (MQ=9)
            cAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCaa                                                    <  2:2858604/93‑1 (MQ=9)
            cAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCaa                                                    <  2:3609804/93‑1 (MQ=9)
            cAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCaa                                                    <  1:6206379/93‑1 (MQ=9)
            cAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCaa                                                    <  1:3998171/93‑1 (MQ=9)
            cAGCCCCGCACACAAAAATGCACATATTGGGCGCTCGATGCGTAGGGCGGGACACGTGGTATCATGTCTTGATATGGGGGGACCATCCTTCaa                                                    >  2:8519357/1‑93 (MQ=11)
             aGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAg                                                   >  1:600162/1‑93 (MQ=12)
             aGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAg                                                   >  1:1796210/1‑93 (MQ=16)
             aGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAg                                                   <  1:747067/93‑1 (MQ=9)
             aGCCCCGTACAAAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAg                                                   <  2:7198377/93‑1 (MQ=9)
              gCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAgg                                                  >  1:5322182/1‑93 (MQ=16)
              gCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAgg                                                  >  2:7328084/1‑93 (MQ=12)
               ccccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGc                                                 <  1:4597470/93‑1 (MQ=9)
               ccccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGc                                                 >  2:4678507/1‑93 (MQ=12)
               ccccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGc                                                 <  2:8348785/93‑1 (MQ=9)
                cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCt                                                >  1:879958/1‑93 (MQ=16)
                cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCt                                                >  2:1181070/1‑93 (MQ=16)
                cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCt                                                <  1:5819241/93‑1 (MQ=9)
                  cGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTaa                                              <  1:5561760/93‑1 (MQ=9)
                   gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTaaa                                             >  1:1014486/1‑93 (MQ=12)
                   gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTaaa                                             <  2:8593525/93‑1 (MQ=9)
                   gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTaaa                                             <  2:1424392/93‑1 (MQ=9)
                    tACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAAt                                            <  1:3823787/93‑1 (MQ=9)
                    tACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAAt                                            >  2:1248645/1‑93 (MQ=16)
                    tACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCAGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAAt                                            >  2:586850/1‑93 (MQ=255)
                     acacAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATa                                           <  1:922408/93‑1 (MQ=9)
                     acacAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATa                                           <  1:4433204/93‑1 (MQ=9)
                     acacAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATa                                           <  1:3260585/93‑1 (MQ=9)
                     acaaAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATa                                           <  2:675730/93‑1 (MQ=9)
                      cacaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATAc                                          >  1:244830/1‑93 (MQ=16)
                       acaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACt                                         >  2:5843564/1‑93 (MQ=12)
                       acaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGAGGGGACCATCCTCCAAGGCTAAATACt                                         >  2:2183293/1‑93 (MQ=255)
                        caAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTc                                        >  2:677125/1‑93 (MQ=16)
                         aaaaaTGCACATATTGTGAGCTCGATGAGTAGGGCTGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTcc                                       >  2:5927281/1‑93 (MQ=255)
                         aaaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTcc                                       <  1:1609610/93‑1 (MQ=9)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      <  2:8059390/93‑1 (MQ=9)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      <  2:7909122/93‑1 (MQ=9)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      <  1:2794073/93‑1 (MQ=9)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      >  2:6960403/1‑93 (MQ=12)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      <  2:2472988/93‑1 (MQ=9)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      >  1:6382044/1‑93 (MQ=16)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      <  1:2174668/93‑1 (MQ=9)
                          aaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCct                                      >  1:2320803/1‑93 (MQ=9)
                           aaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctg                                     >  1:7100162/1‑93 (MQ=16)
                           aaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctg                                     >  2:2129577/1‑93 (MQ=16)
                           aaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctg                                     <  2:3916569/93‑1 (MQ=9)
                           aaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATAATCctg                                     >  1:493358/1‑93 (MQ=255)
                            aaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCctg                                     >  1:7708888/1‑93 (MQ=255)
                            aaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctga                                    >  1:4496526/1‑93 (MQ=9)
                            aaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctga                                    <  2:3267866/93‑1 (MQ=9)
                            aaTGCACATATCGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgc                                    >  2:2899435/1‑92 (MQ=255)
                             aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgac                                   <  2:7398366/93‑1 (MQ=9)
                             aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgac                                   <  2:8727739/93‑1 (MQ=9)
                             aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgac                                   >  1:4980297/1‑93 (MQ=16)
                             aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgac                                   <  2:4961886/93‑1 (MQ=9)
                             aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgac                                   >  1:5173047/1‑93 (MQ=9)
                             aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgac                                   <  2:2289331/93‑1 (MQ=9)
                              tGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgact                                  >  1:3510160/1‑93 (MQ=12)
                              tGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgact                                  >  1:7796859/1‑93 (MQ=9)
                               gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgactg                                 >  2:6006/1‑93 (MQ=12)
                               gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgactg                                 <  1:4142450/93‑1 (MQ=9)
                               gCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgactg                                 <  1:2423724/93‑1 (MQ=9)
                                cacaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgactga                                <  1:5953391/93‑1 (MQ=9)
                                cacaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCctgactga                                >  2:393234/1‑93 (MQ=12)
                                 acaTATTGTGATCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCtgactgac                               >  1:3717270/1‑93 (MQ=255)
                                 acaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCtgactgac                               <  1:1515209/93‑1 (MQ=9)
                                 acaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCtgactgac                               >  1:2865207/1‑93 (MQ=9)
                                 acaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCtgactgac                               <  1:3023347/93‑1 (MQ=9)
                                  caTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAcc                              <  2:7693898/93‑1 (MQ=0)
                                  caTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAcc                              <  2:7078244/93‑1 (MQ=0)
                                  caTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGAcc                              <  2:6602046/93‑1 (MQ=0)
                                                               acacGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAg  <  1:2057965/93‑1 (MQ=18)
                                                                                          |                                                                 
GATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG  >  NC_000913/3941644‑3941799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: