Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,945,351 +C coding (1/600 nt)
coding (240/240 nt)
yifDA ←
yifDA ←
transcription regulator
transcription regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,945,3501.C99.8% 2059.3 / NA 588E81G (GAG→GGG) yifDAtranscription regulator
Reads supporting (aligned to +/- strand):  ref base . (0/0);  major base C (296/291);  minor base A (0/1);  total (296/292)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 639 total aligned reads displayed.

ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCT  >  NC_000913/3945258‑3945437
                                                                                             |                                                                                       
 cAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCctcctc                                                                                        <  2:2958799/93‑1 (MQ=255)
 cAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACctc                                                                                        <  2:5906874/93‑1 (MQ=255)
  aaGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAACCTCGTTATGTCGTGAGGTATGCGCCACctcc                                                                                       <  2:726092/93‑2 (MQ=255)
  aaGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCCCctcc                                                                                       >  1:7368209/1‑92 (MQ=255)
  aaGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACctcc                                                                                       <  1:1098190/93‑2 (MQ=255)
  aaGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACctcc                                                                                       >  1:2835831/1‑92 (MQ=255)
   aGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACctcct                                                                                      <  1:1287069/93‑3 (MQ=255)
   aGCCTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACctcct                                                                                      <  1:7975133/93‑3 (MQ=255)
    gCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACctcctt                                                                                     <  1:6387456/93‑4 (MQ=255)
     cGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACctcctta                                                                                    >  2:575817/1‑89 (MQ=255)
       tCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACg                                                                                   >  1:6051383/1‑93 (MQ=255)
       tCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACg                                                                                   <  1:8799660/93‑1 (MQ=255)
        cccAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACgg                                                                                  <  1:2247246/93‑1 (MQ=255)
         ccAGCCACTGATTAAGCATACATTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACggg                                                                                 >  2:3380495/1‑93 (MQ=255)
          cAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGggc                                                                                <  2:6058714/93‑1 (MQ=255)
             ccACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGggcggc                                                                             >  1:3095581/1‑93 (MQ=255)
              cACTGATTAAGCATACATTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGcc                                                                            <  2:209704/93‑1 (MQ=255)
              cACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGcc                                                                            <  2:561722/93‑1 (MQ=255)
               aCTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCt                                                                           <  1:3487367/93‑1 (MQ=255)
               aCTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCt                                                                           <  1:3979504/93‑1 (MQ=255)
               aCTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCt                                                                           >  2:1165936/1‑93 (MQ=255)
                  gATTAAGCATACATTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGcc                                                                        >  1:5710191/1‑93 (MQ=255)
                  gATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGcc                                                                        >  1:5343839/1‑93 (MQ=255)
                   aTTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCGACCTCCTTACGGGCGGCCTGCCa                                                                       >  2:6286366/1‑93 (MQ=255)
                   aTTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCa                                                                       <  2:8501447/93‑1 (MQ=255)
                    ttAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAg                                                                      >  1:5019371/1‑93 (MQ=255)
                     tAAGCATACATTCCCACAACGATGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAgg                                                                     >  1:1495408/1‑93 (MQ=255)
                       aGCATACATTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTg                                                                   >  1:6618381/1‑93 (MQ=255)
                         cATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCt                                                                 >  2:5281736/1‑93 (MQ=255)
                          aTACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTc                                                                <  2:3154490/93‑1 (MQ=255)
                          aTACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTc                                                                <  1:2379296/93‑1 (MQ=255)
                           tACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCa                                                               <  1:7571249/93‑1 (MQ=255)
                              aTTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGa                                                            <  1:4924959/93‑1 (MQ=255)
                              aTTCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGa                                                            <  2:4915570/93‑1 (MQ=255)
                              aTTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGa                                                            <  1:5192622/93‑1 (MQ=255)
                              aTTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGa                                                            >  2:8582136/1‑93 (MQ=255)
                               ttCCCACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAg                                                           >  1:7864711/1‑93 (MQ=255)
                                 cccACAACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCg                                                         >  1:7277776/1‑93 (MQ=255)
                                   cacaACGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCTGCCTGCCAGGTGCTCATGAGCGtt                                                       >  2:6447022/1‑93 (MQ=255)
                                      aaCGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCt                                                    >  1:4238824/1‑93 (MQ=255)
                                      aaCGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCt                                                    >  1:3910975/1‑93 (MQ=255)
                                       aCGAGGTGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTg                                                   <  1:7504104/93‑1 (MQ=255)
                                          aGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCAt                                                >  2:2327080/1‑93 (MQ=255)
                                          aGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCAt                                                >  2:7991067/1‑93 (MQ=255)
                                           ggCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATa                                               >  1:3288069/1‑93 (MQ=255)
                                           ggCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATa                                               >  2:3598335/1‑93 (MQ=255)
                                            gtgcTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATaa                                              <  1:2546419/91‑1 (MQ=255)
                                            gcgcTGGCACCGATAGAAACCTCGTTATGACGTGAGGTATGCGCCGCCTCCTTACGGGCGGTCTGCCAGGTGCTCATGAGCGTTTCTGCATaa                                              <  2:1420065/93‑1 (MQ=255)
                                             tgcTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCGCCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAg                                             <  1:6790181/92‑1 (MQ=255)
                                                tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa                                          >  1:1151427/1‑93 (MQ=255)
                                                tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa                                          >  1:213277/1‑93 (MQ=255)
                                                tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa                                          <  2:7922357/93‑1 (MQ=255)
                                                tGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCa                                          >  1:4348319/1‑93 (MQ=255)
                                                 ggCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCag                                         >  1:2416549/1‑93 (MQ=255)
                                                  gCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagt                                        >  1:7026525/1‑93 (MQ=255)
                                                   cACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCCCCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagta                                       <  2:619788/93‑1 (MQ=255)
                                                   cACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagta                                       <  2:6751102/93‑1 (MQ=255)
                                                   cACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagta                                       >  2:8803421/1‑93 (MQ=255)
                                                    aCCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagtag                                      >  1:8095168/1‑93 (MQ=255)
                                                     ccGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagtagt                                     >  2:7096525/1‑93 (MQ=255)
                                                     ccGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCagtagt                                     <  2:4168942/93‑1 (MQ=255)
                                                      cGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGtt                                    <  1:8270008/93‑1 (MQ=255)
                                                       gATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGttt                                   >  2:7410487/1‑93 (MQ=255)
                                                       gATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGttt                                   >  1:3687908/1‑93 (MQ=255)
                                                       gATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGttt                                   >  1:7169894/1‑93 (MQ=255)
                                                        aTAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGtttt                                  <  2:1923668/93‑1 (MQ=255)
                                                         tAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGttttt                                 <  2:3448571/93‑1 (MQ=255)
                                                          aGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTc                                <  1:1684128/93‑1 (MQ=255)
                                                            aaaaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAc                              >  2:2752635/1‑93 (MQ=255)
                                                            aaaaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAc                              >  1:4061851/1‑93 (MQ=255)
                                                             aaaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAcc                             <  1:1582040/93‑1 (MQ=255)
                                                             aaaCTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCAcc                             >  1:2716815/1‑93 (MQ=255)
                                                                cTCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGc                          >  1:1874699/1‑93 (MQ=255)
                                                                 tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCa                         <  2:7765014/93‑1 (MQ=255)
                                                                 tCGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCa                         >  1:6921375/1‑93 (MQ=255)
                                                                  cGTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAg                        <  1:6307302/93‑1 (MQ=255)
                                                                   gTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGc                       >  2:1710881/1‑93 (MQ=255)
                                                                   gTTATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGc                       >  2:2523476/1‑93 (MQ=255)
                                                                    ttATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATTAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCg                      >  1:8499372/1‑93 (MQ=255)
                                                                    ttATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCg                      <  2:3734733/93‑1 (MQ=255)
                                                                    ttATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCg                      >  1:7734513/1‑93 (MQ=255)
                                                                     tATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCgg                     <  2:8706833/93‑1 (MQ=255)
                                                                     tATGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGGGCTCATGAGCGTTTCTGCATAAGGCAGGAGTTTTTCACCGGCAGCgg                     >  1:4684040/1‑93 (MQ=255)
                                                                      aTGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGACAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGt                    >  2:8177214/1‑93 (MQ=255)
                                                                       tGTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGtt                   <  1:2976457/93‑1 (MQ=255)
                                                                        gTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTa                  <  1:5869364/93‑1 (MQ=255)
                                                                        gTCGTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTa                  >  2:4403805/1‑93 (MQ=255)
                                                                           gTGAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAAc               <  2:3037139/93‑1 (MQ=255)
                                                                             gAGGTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACgg             >  2:8389746/1‑93 (MQ=255)
                                                                               ggTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGat           <  1:6173280/93‑1 (MQ=255)
                                                                                gTATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGata          >  1:4413465/1‑93 (MQ=255)
                                                                                 tATGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGatat         >  2:4626118/1‑93 (MQ=255)
                                                                                  aTGCGCCCCCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATAtt        <  2:7633036/93‑1 (MQ=255)
                                                                                   tGCGCCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTg       <  2:5105233/93‑1 (MQ=255)
                                                                                    gcgcCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGt      <  2:1310101/93‑1 (MQ=255)
                                                                                      gcCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGttt    >  2:1568900/1‑93 (MQ=255)
                                                                                      gcCACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGttt    <  1:5558213/93‑1 (MQ=255)
                                                                                       ccACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTc   >  2:2843244/1‑93 (MQ=255)
                                                                                       ccACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTc   >  2:3935587/1‑93 (MQ=255)
                                                                                        cACCTCCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCt  <  1:375078/93‑1 (MQ=255)
                                                                                             |                                                                                       
ACAAGCGTCCCAGCCACTGATTAAGCATACATTCCCACAACGAGGCGCTGGCACCGATAGAAAACTCGTTATGTCGTGAGGTATGCGCCACCTCTTACGGGCGGCCTGCCAGGTGCTCATGAGCGTTTCTGCATAAGGCAGTAGTTTTTCACCGGCAGCGGTTAAACGGATATTGTTTCT  >  NC_000913/3945258‑3945437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: