Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,016,180 A→G I448T (ATA→ACA)  b0955 ← putative ATP‑dependent protease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,016,1800AG99.7% 1060.7 / NA 305I448T (ATA→ACA) b0955putative ATP‑dependent protease
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (147/157);  minor base T (0/1);  total (147/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 318 total aligned reads displayed.

AAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTATCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATC  >  NC_000913/1016090‑1016269
                                                                                          |                                                                                         
 aacaacCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCa                                                                                        <  1:4809798/93‑1 (MQ=255)
  accaccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAg                                                                                       <  1:6412402/93‑1 (MQ=255)
   ccaccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAgg                                                                                      <  2:3772606/93‑1 (MQ=255)
    caccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAggg                                                                                     >  2:4791699/1‑93 (MQ=255)
    caccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAggg                                                                                     >  2:2634274/1‑93 (MQ=255)
    caccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAggg                                                                                     <  1:3864941/93‑1 (MQ=255)
     cccgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgc                                                                                    <  1:5197462/92‑1 (MQ=255)
     accgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgc                                                                                    >  1:7107999/1‑93 (MQ=255)
     accgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgc                                                                                    >  2:741558/1‑93 (MQ=255)
      ccgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgcg                                                                                   >  1:830475/1‑93 (MQ=255)
       cgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgcgc                                                                                  <  1:2177793/93‑1 (MQ=255)
        gaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCa                                                                                 >  1:4741548/1‑93 (MQ=255)
        gaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCa                                                                                 >  1:1766848/1‑93 (MQ=255)
        gaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCa                                                                                 >  1:5841033/1‑93 (MQ=255)
          ccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCaga                                                                               >  1:2584569/1‑93 (MQ=255)
            ggCTTGGCGCGACCGAACTGAGCGACTGAACCTGTGATAGCGATTCTCTGATTCACCGGCCCATCGGCGAGGGCGCTTGTCAGGGCGCAGAGt                                                                             <  2:7554928/93‑1 (MQ=255)
             gCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGtt                                                                            <  2:5215418/93‑1 (MQ=255)
              cTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCTCTTGTCAGGGCGCAGAGTTc                                                                           <  2:4230184/93‑1 (MQ=255)
               tGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCa                                                                          <  2:8023938/93‑1 (MQ=255)
                gggCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAg                                                                         >  1:95322/1‑93 (MQ=255)
                  gcgcGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGcc                                                                       >  1:5479478/1‑93 (MQ=255)
                    gcgACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCAt                                                                     >  2:7640237/1‑93 (MQ=255)
                      gACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCg                                                                   >  1:7768677/1‑93 (MQ=255)
                       gccGAACTGATCGGCTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGa                                                                  <  1:6159139/92‑1 (MQ=255)
                        ccGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAg                                                                 <  1:5718363/93‑1 (MQ=255)
                        ccGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAg                                                                 <  1:5352865/93‑1 (MQ=255)
                        ccGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAg                                                                 <  1:4342122/93‑1 (MQ=255)
                           aaCTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCa                                                              >  1:2259238/1‑93 (MQ=255)
                             cTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACt                                                            <  1:5058209/93‑1 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGGTTCTCCGGCACATCCGCGAAGGCGGTTGGCAGGGCGCAGCGTTCAGCGATCGGGGCACtt                                                           >  2:3483299/1‑92 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCCCTa                                                           >  2:4102268/1‑93 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTa                                                           >  2:3699963/1‑93 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTa                                                           <  1:2055098/93‑1 (MQ=255)
                               gATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAt                                                          >  2:6946214/1‑93 (MQ=255)
                               gATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAt                                                          <  1:6964609/93‑1 (MQ=255)
                                aTCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAtc                                                         <  1:1415102/93‑1 (MQ=255)
                                     cTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCAt                                                    >  2:2339236/1‑93 (MQ=255)
                                     cTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCAt                                                    >  2:5395455/1‑93 (MQ=255)
                                     cTGAACCTGAGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGTTGAAGAGTTCAGCCATCGAGCCAATATCTcctt                                                    >  2:7162979/1‑91 (MQ=255)
                                      tGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATc                                                   >  1:4011835/1‑93 (MQ=255)
                                      tGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATc                                                   <  2:5626944/93‑1 (MQ=255)
                                       gAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCa                                                  >  1:7583856/1‑93 (MQ=255)
                                        aaCCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCaa                                                 >  1:3425840/1‑93 (MQ=255)
                                         aCCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAAc                                                >  1:352689/1‑93 (MQ=255)
                                         aCCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAAc                                                <  2:7647385/93‑1 (MQ=255)
                                          ccTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACt                                               <  1:7896375/93‑1 (MQ=255)
                                           cTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTAAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACtt                                              <  1:1676697/93‑1 (MQ=255)
                                             gtgATAGCGATACTCTGATTCGCCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCCCTATCTCCATCAACTTcc                                            <  2:5903747/93‑2 (MQ=255)
                                              tgATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCAc                                           >  1:5110058/1‑93 (MQ=255)
                                               gATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACt                                          <  1:1005850/93‑1 (MQ=255)
                                                aTAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTg                                         <  1:6287692/93‑1 (MQ=255)
                                                 tAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGt                                        >  1:3400873/1‑93 (MQ=255)
                                                 tAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGt                                        >  1:4176524/1‑93 (MQ=255)
                                                  aGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTa                                       <  1:8481568/93‑1 (MQ=255)
                                                  aGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTa                                       <  2:702641/93‑1 (MQ=255)
                                                   gCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTAt                                      >  1:3596725/1‑93 (MQ=255)
                                                     gATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGa                                    <  2:3944202/93‑1 (MQ=255)
                                                     gATACTCTGATTCACCGGCAAATCGGCGAGGGCCCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGa                                    <  2:300634/93‑1 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  >  1:8740341/1‑93 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  >  2:6130513/1‑93 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  >  2:1678995/1‑93 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  <  1:279399/93‑1 (MQ=255)
                                                         ctctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGc                                <  1:3182716/93‑1 (MQ=255)
                                                          tctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCt                               >  1:2410870/1‑93 (MQ=255)
                                                          tctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCt                               >  2:6403879/1‑93 (MQ=255)
                                                           ctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTc                              <  1:2659574/93‑1 (MQ=255)
                                                            tGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCa                             >  2:7753319/1‑93 (MQ=255)
                                                            tGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCa                             >  2:6685255/1‑93 (MQ=255)
                                                                tCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATg                         <  1:1481674/93‑1 (MQ=255)
                                                                 cACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGt                        >  1:8068682/1‑93 (MQ=255)
                                                                  aCCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGTACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTc                       <  1:560597/93‑1 (MQ=255)
                                                                  aCCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTc                       >  2:8182931/1‑93 (MQ=255)
                                                                   ccGGCCCATCGGCGAGGGCACTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCa                      <  1:1082214/93‑1 (MQ=255)
                                                                   ccGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCa                      <  1:4648686/93‑1 (MQ=255)
                                                                    cGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAg                     <  1:3570329/93‑1 (MQ=255)
                                                                    cGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAg                     >  1:3813284/1‑93 (MQ=255)
                                                                     ggCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGc                    >  1:236409/1‑93 (MQ=255)
                                                                     ggCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGc                    <  2:1229023/93‑1 (MQ=255)
                                                                      gCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCg                   >  2:1443116/1‑93 (MQ=255)
                                                                       cacaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGa                  <  2:4880700/93‑1 (MQ=255)
                                                                       cacaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGa                  <  1:4455592/93‑1 (MQ=255)
                                                                        acaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGAt                 <  2:1374919/93‑1 (MQ=255)
                                                                        acaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGAt                 <  2:6969487/93‑1 (MQ=255)
                                                                            cGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTg             <  2:8170493/93‑1 (MQ=255)
                                                                             ggCGAGGGCGCTTGTCGGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAACGTCAGCGATGCTga            <  2:6228713/93‑1 (MQ=255)
                                                                             ggCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTga            <  1:4896444/93‑1 (MQ=255)
                                                                               cGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTgaga          >  1:6618773/1‑93 (MQ=255)
                                                                                 aGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCCCTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAg        <  1:2524319/93‑1 (MQ=255)
                                                                                 aGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAg        <  2:2691890/93‑1 (MQ=255)
                                                                                 aGGGCGCGTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAg        <  1:5973712/93‑1 (MQ=255)
                                                                                  gggCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAgg       <  2:4616522/93‑1 (MQ=255)
                                                                                   ggCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAggg      <  1:1633606/93‑1 (MQ=255)
                                                                                   ggCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAggg      <  2:8610621/93‑1 (MQ=255)
                                                                                    gcgcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAgggg     <  2:2433032/93‑1 (MQ=255)
                                                                                     ggcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGa    <  1:2721219/92‑1 (MQ=255)
                                                                                     ctcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGa    <  2:3640684/91‑1 (MQ=255)
                                                                                     cgcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGa    <  1:3699209/93‑1 (MQ=255)
                                                                                      gcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGAt   <  2:829670/93‑1 (MQ=255)
                                                                                       cTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATc  >  2:1023013/1‑93 (MQ=255)
                                                                                       cTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATc  >  2:5777159/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTATCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATC  >  NC_000913/1016090‑1016269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: