Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,141,015 T→C Q859R (CAG→CGG)  rne ← RNase E

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,141,0150TC99.6% 918.7 / ‑5.1 268Q859R (CAG→CGG) rneRNase E
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (130/137);  total (131/137)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.42e-01

Only 100 of 290 total aligned reads displayed.

ACAACTGGCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACG  >  NC_000913/1140925‑1141104
                                                                                          |                                                                                         
acaacTGGCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGcgccgc                                                                                         >  1:4338485/1‑93 (MQ=255)
    cTGGCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCtt                                                                                     >  2:6451961/1‑93 (MQ=255)
     tGGCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTc                                                                                    <  2:8032336/93‑1 (MQ=255)
     cggCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTc                                                                                    <  1:5688221/92‑1 (MQ=255)
      ggCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTTCTGTTCGCGCCCCTCTTCa                                                                                   >  1:3113113/1‑93 (MQ=255)
      ggCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCa                                                                                   <  1:5913388/93‑1 (MQ=255)
      ggCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCa                                                                                   >  2:6979482/1‑93 (MQ=255)
        cgcgcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAAc                                                                                 <  2:5226013/93‑1 (MQ=255)
        cgcgcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAAc                                                                                 <  1:7288796/93‑1 (MQ=255)
         gcgcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAAcc                                                                                >  2:6020962/1‑93 (MQ=255)
         gcgcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAAcc                                                                                >  2:6331892/1‑93 (MQ=255)
         gcgcTAACAACCGGTTCGAGAGCGGCGGCGACTGGGACCTCAGTCACCATCGGCTGCACATGTACTTCCTTCTGTTCGCGCCGCTCTTCAAcc                                                                                >  1:7802196/1‑93 (MQ=255)
          cgcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCt                                                                               <  1:3826685/93‑1 (MQ=255)
          cgcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCt                                                                               <  2:6164035/93‑1 (MQ=255)
           gcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTg                                                                              <  2:7996150/93‑1 (MQ=255)
           gcTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTg                                                                              >  1:1649496/1‑93 (MQ=255)
            cTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGt                                                                             >  1:6959966/1‑93 (MQ=255)
            cTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGt                                                                             <  1:3235638/93‑1 (MQ=255)
             tAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTa                                                                            <  1:933027/93‑1 (MQ=255)
               acaacCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACa                                                                          >  2:4374386/1‑93 (MQ=255)
               acaacCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACa                                                                          <  2:2048419/93‑1 (MQ=255)
               acaacCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACa                                                                          <  2:1961237/93‑1 (MQ=255)
                caacCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACAt                                                                         <  1:5383813/93‑1 (MQ=255)
                 aacCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATc                                                                        >  1:4759653/1‑93 (MQ=255)
                  acCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCt                                                                       <  1:106330/93‑1 (MQ=255)
                  acCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCt                                                                       <  2:1718301/93‑1 (MQ=255)
                  acCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCt                                                                       <  2:8106072/93‑1 (MQ=255)
                   ccGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCtt                                                                      <  1:6933975/93‑1 (MQ=255)
                     ggTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGc                                                                    >  2:2874844/1‑93 (MQ=255)
                     ggTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGc                                                                    <  1:4892051/93‑1 (MQ=255)
                      gTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCg                                                                   <  2:6226685/93‑1 (MQ=255)
                      gTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCg                                                                   >  1:2181073/1‑93 (MQ=255)
                      gTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACACGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCg                                                                   <  1:6613889/93‑1 (MQ=255)
                       ttCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCgg                                                                  <  2:7449693/93‑1 (MQ=255)
                        tCGATAGCGGCGGCTACAGGGCCCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGAGCCGCTCGTAAACCTGTACATATTGCGGa                                                                 <  2:5425801/93‑1 (MQ=255)
                        tCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGa                                                                 <  1:808673/93‑1 (MQ=255)
                        tCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGa                                                                 <  2:1061884/93‑1 (MQ=255)
                        tCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGa                                                                 <  2:14893/93‑1 (MQ=255)
                        tCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGa                                                                 <  2:8380335/93‑1 (MQ=255)
                           aTAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGt                                                              >  1:1360569/1‑93 (MQ=255)
                            tAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTa                                                             <  1:3866931/93‑1 (MQ=255)
                               cggcggcgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACaa                                                          <  1:2941892/93‑1 (MQ=255)
                                ggcggcgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAAt                                                         <  2:5654605/93‑1 (MQ=255)
                                ggcggcgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGGACAAt                                                         >  2:4676593/1‑93 (MQ=255)
                                 gcggcgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAAtt                                                        <  2:212090/93‑1 (MQ=255)
                                 gcggcgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAAtt                                                        >  1:3403926/1‑93 (MQ=255)
                                    gcgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGa                                                     <  1:3646222/93‑1 (MQ=255)
                                     cgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGAt                                                    >  1:7163802/1‑93 (MQ=255)
                                     cgACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGAt                                                    <  1:6303033/93‑1 (MQ=255)
                                      gACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATa                                                   <  2:8611143/93‑1 (MQ=255)
                                      gACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATa                                                   <  1:7622386/93‑1 (MQ=255)
                                       aCAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAg                                                  >  1:3751756/1‑93 (MQ=255)
                                        cAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAga                                                 >  2:2611057/1‑92 (MQ=255)
                                        cAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGc                                                 <  2:8547668/93‑1 (MQ=255)
                                        cAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGc                                                 >  2:6864251/1‑93 (MQ=255)
                                          gggACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCgg                                               <  2:648651/93‑1 (MQ=255)
                                            gACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGAt                                             >  1:8022536/1‑93 (MQ=255)
                                            gACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGAt                                             >  2:5361966/1‑93 (MQ=255)
                                               cTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCa                                          <  1:6874288/93‑1 (MQ=255)
                                               cTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCa                                          <  2:4873406/93‑1 (MQ=255)
                                                tCAGTCACCATCGGCTGCACCTGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTCACTCTCGCGGCCGTACAATTGGATAGCGGATCCAg                                         >  1:8494989/1‑93 (MQ=255)
                                                   gTCCCCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACt                                      <  1:6798784/93‑1 (MQ=255)
                                                    tCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACtt                                     <  2:7223888/93‑1 (MQ=255)
                                                     cACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACttt                                    >  1:2436489/1‑93 (MQ=255)
                                                        cATCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGcc                                 <  2:3545039/93‑1 (MQ=255)
                                                         aTCGGCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCa                                <  1:6700240/93‑1 (MQ=255)
                                                            ggCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCagag                             >  1:1934880/1‑93 (MQ=255)
                                                             gCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAgg                            >  1:2100168/1‑93 (MQ=255)
                                                             gCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAgg                            >  1:5541233/1‑93 (MQ=255)
                                                             gCTGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAgg                            >  2:1308845/1‑93 (MQ=255)
                                                               tGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGGCTTTGCCAGAGGcc                          >  1:1304908/1‑93 (MQ=255)
                                                               tGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGcc                          >  2:3928484/1‑93 (MQ=255)
                                                               tGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGcc                          <  2:4493555/93‑1 (MQ=255)
                                                               tGCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGcc                          >  1:5226184/1‑93 (MQ=255)
                                                                gCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGTATCCACACTTTGCCAGAGGCCa                         >  1:5008636/1‑93 (MQ=255)
                                                                gCACATGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCa                         >  1:332099/1‑93 (MQ=255)
                                                                    aTGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTc                     <  2:3837064/93‑1 (MQ=255)
                                                                    aTGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTc                     <  2:7069971/93‑1 (MQ=255)
                                                                    aTGTACTTCTTCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTc                     >  1:8820265/1‑93 (MQ=255)
                                                                       tACTTCTCCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCgg                  <  2:2324848/93‑1 (MQ=255)
                                                                        tcttcttCCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGga                 <  2:7278394/92‑1 (MQ=255)
                                                                          ttcttcCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGgaga               <  1:8506794/93‑1 (MQ=255)
                                                                          ttcttcCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAAGTCCTgaga               >  1:6407953/1‑93 (MQ=255)
                                                                           tcttcCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGTACGTACAATTGGATAGCGAATCCAGACTTTGCCAGAGGCCACTTCCTGAAAc              >  1:3774756/1‑93 (MQ=255)
                                                                            cttcCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGAcg             <  2:5556872/93‑1 (MQ=255)
                                                                              tcCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGAcgcg           <  2:6717859/93‑1 (MQ=255)
                                                                              tcCTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGAcgcg           >  2:3069430/1‑93 (MQ=255)
                                                                               ccTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACgcgc          >  1:1024789/1‑93 (MQ=255)
                                                                                cTGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCa         >  1:2840292/1‑93 (MQ=255)
                                                                                 tGTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCAc        <  1:5571773/93‑1 (MQ=255)
                                                                                  gTTCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACg       >  2:5792191/1‑93 (MQ=255)
                                                                                   tccgctCTTCTCTTCAACCTGTACATCTTGCGGACGTACAAGTGGATAGCGGTTCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGc      <  2:3209078/91‑1 (MQ=255)
                                                                                    tCGCGCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTGTGCCAGAGGCCAGTTCCGGAGACGCGCACGCt     <  1:8310966/93‑1 (MQ=255)
                                                                                     cgcgCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTa    >  2:7734401/1‑93 (MQ=255)
                                                                                     cgcgCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTa    >  2:2094347/1‑93 (MQ=255)
                                                                                     cgcgCCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTa    <  1:1518237/93‑1 (MQ=255)
                                                                                      gcgcCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTAc   <  1:2572710/93‑1 (MQ=255)
                                                                                      gcgcCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTAc   >  1:4416072/1‑93 (MQ=255)
                                                                                      gcgcCGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGAGGATCCAGACTTTGCCAGAGGCCAGTACCGGAGCCGAGCCCGCTAc   >  1:7484152/1‑93 (MQ=255)
                                                                                       cgccgcTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACg  <  1:4223346/93‑1 (MQ=255)
                                                                                          |                                                                                         
ACAACTGGCGCGCTAACAACCGGTTCGATAGCGGCGGCGACAGGGACCTCAGTCACCATCGGCTGCACATGTACTTCTTCCTGTTCGCGCTGCTCTTCAACCTGTACATCTTGCGGACGTACAATTGGATAGCGGATCCAGACTTTGCCAGAGGCCAGTTCCGGAGACGCGCACGCTACG  >  NC_000913/1140925‑1141104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: