Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,175,607 A→G S320G (AGC→GGC)  ycfU → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,175,6070AG98.9% 892.6 / ‑0.8 268S320G (AGC→GGC) ycfUhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/3);  new base G (133/132);  total (133/135)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.16e-01

Only 100 of 278 total aligned reads displayed.

GTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTC  >  NC_000913/1175517‑1175696
                                                                                          |                                                                                         
gTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGgc                                                                                         <  2:2976402/93‑1 (MQ=255)
gTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGgc                                                                                         >  1:3536941/1‑93 (MQ=255)
  aaTGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGgcgc                                                                                       <  1:1766474/93‑1 (MQ=255)
   agggAGTATCATGGCGAAGTATCGATCCTGCAAACGCAAGGCTTAACTCCGCGACATATCATGATGTTCTTTATGGTGCAAGGTTCCGGCGcc                                                                                      >  2:7800593/3‑93 (MQ=255)
   aTGGAGAAGCAGGGCGAAGTAGCGATCCTGCACACGCAAGGCTTAACTCCGCGACCAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGcc                                                                                      >  1:5226346/1‑93 (MQ=255)
   aTGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGcc                                                                                      <  2:2331232/93‑1 (MQ=255)
   aTGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGcc                                                                                      >  1:2725642/1‑93 (MQ=255)
    tGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACGCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCg                                                                                     >  2:5182320/1‑93 (MQ=255)
     ggAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCggg                                                                                    <  2:6862706/93‑1 (MQ=255)
        gaAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGAt                                                                                 >  1:1381819/1‑93 (MQ=255)
          aGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTa                                                                               >  1:5609285/1‑93 (MQ=255)
          aGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTa                                                                               >  1:8148722/1‑93 (MQ=255)
          aGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTa                                                                               >  1:3087072/1‑93 (MQ=255)
           gCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTAt                                                                              >  2:6619232/1‑93 (MQ=255)
           gCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTAt                                                                              <  1:7057541/93‑1 (MQ=255)
              gtgagAAGTAGCGATCCTTCAAACGCAAGGCTTAACTCCGCTACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCgg                                                                           <  2:6403012/89‑1 (MQ=255)
                 cGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGGATTATCGGTGc                                                                        <  1:3335564/93‑1 (MQ=255)
                     gTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATc                                                                    <  2:4045331/93‑1 (MQ=255)
                     gTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATc                                                                    >  1:7314024/1‑93 (MQ=255)
                      tAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATcc                                                                   <  2:4762688/93‑1 (MQ=255)
                      tAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATcc                                                                   <  1:4305030/93‑1 (MQ=255)
                      tAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATcc                                                                   >  2:903876/1‑93 (MQ=255)
                       aGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCt                                                                  <  1:1722086/93‑1 (MQ=255)
                        gCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTc                                                                 <  1:1592911/93‑1 (MQ=255)
                          gATCCTGCAAACGCAAGGCTTACCTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCgg                                                               <  1:8753776/93‑1 (MQ=255)
                           aTCCTGCAAACGCAAGGCTTAACTGCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGa                                                              >  2:8450240/1‑93 (MQ=255)
                           aTCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGa                                                              >  1:2130840/1‑93 (MQ=255)
                             ccTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAgc                                                            >  2:1485627/1‑93 (MQ=255)
                             ccTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAgc                                                            <  2:105411/93‑1 (MQ=255)
                               tGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAgcgg                                                          >  2:2058617/1‑93 (MQ=255)
                               tGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAgcgg                                                          >  1:892250/1‑93 (MQ=255)
                                gCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAgcggc                                                         <  2:8765867/93‑1 (MQ=255)
                                  aaaCGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGgcgc                                                       >  2:3457087/1‑93 (MQ=255)
                                  aaaCGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGgcgc                                                       <  2:5901372/93‑1 (MQ=255)
                                   aaCGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCt                                                      <  1:6409706/93‑1 (MQ=255)
                                   aaCGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCt                                                      <  2:4872065/93‑1 (MQ=255)
                                    aCGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCtt                                                     >  1:1095781/1‑93 (MQ=255)
                                    aCGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCtt                                                     >  1:7342509/1‑93 (MQ=255)
                                    aCGCAAGGCTTAACTCCGCGACAAATCATGATGATCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCtt                                                     <  2:3747051/93‑1 (MQ=255)
                                       cAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGgc                                                  <  1:4505225/93‑1 (MQ=255)
                                         aGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGgcgc                                                >  2:7538979/1‑93 (MQ=255)
                                          ggCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGcc                                               >  1:6928190/1‑93 (MQ=255)
                                          ggCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGcc                                               <  2:1573829/93‑1 (MQ=255)
                                             ttAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTTGGAGCGGCGCTTGGCGCCCTg                                            >  2:8320410/1‑93 (MQ=255)
                                             ttAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTg                                            >  2:2411764/1‑93 (MQ=255)
                                             ttAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTg                                            >  1:1189314/1‑93 (MQ=255)
                                               aaCTCCGGTACAACTTATGATGGTCTTTAGGGTGCAAGGGGCTGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGGGCTTGGCGCCCTGCt                                          <  2:3056761/93‑1 (MQ=255)
                                                aCTCCGCGACAAATCATGATGGTCTTTCTGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGAAGCGGCGCTTGGCGCCCTGCtg                                         >  2:1208422/1‑92 (MQ=255)
                                                aCTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCtt                                         >  1:8042889/1‑93 (MQ=255)
                                                aCTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCtt                                         <  1:4982201/93‑1 (MQ=255)
                                                 cTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTg                                        <  2:4442469/93‑1 (MQ=255)
                                                  tCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgc                                       >  2:2932259/1‑93 (MQ=255)
                                                  tCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgc                                       <  2:165896/93‑1 (MQ=255)
                                                  tCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTCGGCGCCCTGCTTgc                                       >  1:5743797/1‑93 (MQ=255)
                                                   ccGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgcc                                      <  2:8122442/93‑1 (MQ=255)
                                                   ccGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgcc                                      >  2:1907083/1‑93 (MQ=255)
                                                    cgcgACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgcca                                     <  1:1272743/93‑1 (MQ=255)
                                                     gcgACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgccag                                    >  2:6690961/1‑93 (MQ=255)
                                                     gcgACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgccac                                    >  1:5300195/1‑92 (MQ=255)
                                                      cgACAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgccagc                                   >  2:6209559/1‑93 (MQ=255)
                                                       gACAAATCATGGTGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgccagcc                                  >  2:8689217/1‑93 (MQ=255)
                                                        aCAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTgccagcca                                 >  1:5446181/1‑93 (MQ=255)
                                                         cAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGccagccag                                >  1:7614094/1‑93 (MQ=255)
                                                         cAAATCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGccagccag                                <  2:4643267/93‑1 (MQ=255)
                                                           aaTCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGtt                              <  2:3552985/93‑1 (MQ=255)
                                                            aTCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTa                             <  1:8384606/93‑1 (MQ=255)
                                                             tCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTaa                            >  2:1095865/1‑93 (MQ=255)
                                                             tCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTaa                            >  1:6005475/1‑93 (MQ=255)
                                                             tCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTaa                            >  1:2281221/1‑93 (MQ=255)
                                                             tCATGATGGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTaa                            >  2:3973801/1‑93 (MQ=255)
                                                               atgatgGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAaat                          <  2:2271863/93‑1 (MQ=255)
                                                                tgatgGTTTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGTCGCCCTGCTTGCCAGCCAGTTAaata                         <  1:6258778/93‑1 (MQ=255)
                                                                 gatgGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAaataa                        >  1:3882405/1‑93 (MQ=255)
                                                                 gatgGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAaataa                        <  2:7400878/93‑1 (MQ=255)
                                                                  atgGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAaataat                       <  1:1828654/93‑1 (MQ=255)
                                                                   tgGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATc                      >  1:1024173/1‑93 (MQ=255)
                                                                   tgGTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATc                      <  2:7382145/93‑1 (MQ=255)
                                                                     gTCTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCta                    >  1:6749886/1‑92 (MQ=255)
                                                                       cTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGAt                  <  1:6512489/93‑1 (MQ=255)
                                                                       cTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGAt                  <  1:7750407/93‑1 (MQ=255)
                                                                       cTTTATGGTGCAAGGGGCCGGCGCCGGGATTATCGATGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGAt                  <  2:5602099/93‑1 (MQ=255)
                                                                        tttATGGGGCAAGGGGCCGGCGCCGGGATTCTCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATg                 <  1:661578/93‑1 (MQ=255)
                                                                         ttATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGc                <  1:404751/93‑1 (MQ=255)
                                                                         ttATGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGc                <  2:3897365/93‑1 (MQ=255)
                                                                           aTGGTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCg              <  1:4112411/93‑1 (MQ=255)
                                                                             ggTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGAt            >  2:4673406/1‑93 (MQ=255)
                                                                              gTGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATa           <  2:5358128/93‑1 (MQ=255)
                                                                              gTGCAAGGGGCCGCCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATa           <  2:327709/93‑1 (MQ=255)
                                                                               tGCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATaa          <  2:4545526/93‑1 (MQ=255)
                                                                                gCAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAAt         <  1:5958318/93‑1 (MQ=255)
                                                                                 cAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATc        <  1:3170425/93‑1 (MQ=255)
                                                                                 cAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATc        <  2:4995054/93‑1 (MQ=255)
                                                                                 cAAGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATc        <  1:7206205/93‑1 (MQ=255)
                                                                                  aaGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGTGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCg       >  2:4361087/1‑93 (MQ=255)
                                                                                   aGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCgg      >  1:4421084/1‑93 (MQ=255)
                                                                                   aGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCgg      <  1:549623/93‑1 (MQ=255)
                                                                                   aGGGGCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCgg      >  1:2549666/1‑93 (MQ=255)
                                                                                    ggggCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCGGc     >  2:6970275/1‑93 (MQ=255)
                                                                                    ggggCCGGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCGGc     >  1:3745003/1‑93 (MQ=255)
                                                                                       gccggcgccggcATTATCGGTGCGATCCTCGGAGCGGAGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTc  <  2:378729/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTC  >  NC_000913/1175517‑1175696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: