Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,202,871 A→G E131E (GAA→GAG ymfL → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,202,8710AG99.2% 868.9 / NA 253E131E (GAA→GAGymfLhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base G (122/128);  minor base T (1/1);  total (123/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 263 total aligned reads displayed.

CGATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTT  >  NC_000913/1202781‑1202959
                                                                                          |                                                                                        
 gATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCg                                                                                       >  2:6042094/1‑93 (MQ=255)
   tatTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCa                                                                                     >  2:8504046/1‑93 (MQ=255)
        aCCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATgaga                                                                                >  2:8756009/1‑93 (MQ=255)
        aCCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATgaga                                                                                >  1:5801024/1‑93 (MQ=255)
        aCCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATgaga                                                                                <  2:5356441/93‑1 (MQ=255)
           aGCGTCTGCTGGAAGTCATTGAACCGATCTGCAGTTATTCAAACCCGATTCGTTCAGCATTCGACGCCGGTGTAGTGGGGCCACATgagagca                                                                             >  2:6066223/1‑90 (MQ=255)
           aGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaaga                                                                             <  2:7262771/93‑1 (MQ=255)
            gCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGAc                                                                            >  2:7774075/1‑93 (MQ=255)
            gCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGAc                                                                            >  1:2403591/1‑93 (MQ=255)
            gCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGAc                                                                            >  1:1267635/1‑93 (MQ=255)
             cGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACa                                                                           >  2:3996032/1‑93 (MQ=255)
                 tgctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCaa                                                                       >  2:3474040/1‑93 (MQ=255)
                 tgctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCaa                                                                       >  2:3405290/1‑93 (MQ=255)
                 tgctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCaa                                                                       <  1:7521573/93‑1 (MQ=255)
                 tgctgGAAGTCATTGAACAGATAGGCAGTTATTCAAAACAGATTCGTTCAGCACTCGAGGACGGTGTAGTGGAGCCGAATGAGAAGACAGCaa                                                                       <  2:5952175/93‑1 (MQ=255)
                  gctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAAt                                                                      <  2:5063467/93‑1 (MQ=255)
                   ctgAAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAAtt                                                                     <  2:1709670/93‑1 (MQ=255)
                     ggAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTaa                                                                   >  2:4502951/1‑93 (MQ=255)
                     ggAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTaa                                                                   >  2:4399649/1‑93 (MQ=255)
                     ggAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTaa                                                                   <  2:1079146/93‑1 (MQ=255)
                     ggAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTaa                                                                   <  1:7704042/93‑1 (MQ=255)
                      gAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAac                                                                  <  2:2406935/93‑1 (MQ=255)
                      gAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAac                                                                  <  2:1282887/93‑1 (MQ=255)
                          tCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAacgacg                                                              >  2:4293657/1‑93 (MQ=255)
                           cATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAAcgacga                                                             <  2:6420368/93‑1 (MQ=255)
                           cATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAAcgacga                                                             <  1:3175919/93‑1 (MQ=255)
                           cATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAAcgacga                                                             <  2:2932170/93‑1 (MQ=255)
                            aTTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAg                                                            >  1:7033379/1‑93 (MQ=255)
                             atGAACAGATCGACAGGTATTCAAAACAGATGCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGc                                                           <  1:4610358/92‑1 (MQ=255)
                              tGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCt                                                          <  1:4451497/93‑1 (MQ=255)
                               gAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTg                                                         >  1:5564784/1‑93 (MQ=255)
                                 aCAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTa                                                       >  2:7976388/1‑93 (MQ=255)
                                   aGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtc                                                     >  1:1665175/1‑93 (MQ=255)
                                   aGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtc                                                     <  1:8043220/93‑1 (MQ=255)
                                     aTCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtctc                                                   <  2:3717363/93‑1 (MQ=255)
                                     aTCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtctc                                                   <  2:4016442/93‑1 (MQ=255)
                                       cGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtctctc                                                 <  1:7849745/93‑1 (MQ=255)
                                        ggCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCa                                                >  1:4823338/1‑93 (MQ=255)
                                        ggCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCa                                                <  2:7602904/93‑1 (MQ=255)
                                        ggCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCa                                                >  1:527304/1‑93 (MQ=255)
                                         gCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCaa                                               >  1:7492245/1‑93 (MQ=255)
                                         gCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCaa                                               <  2:843569/93‑1 (MQ=255)
                                           aGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAtt                                             <  1:1340953/93‑1 (MQ=255)
                                           aGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAtt                                             >  1:5496313/1‑93 (MQ=255)
                                              tATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCg                                          >  1:1845480/1‑93 (MQ=255)
                                                ttCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGaa                                        >  2:7219886/1‑93 (MQ=255)
                                                ttCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGaa                                        <  1:883349/93‑1 (MQ=255)
                                                 tCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAg                                       >  1:1112126/1‑93 (MQ=255)
                                                 tCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAg                                       >  2:2820140/1‑93 (MQ=255)
                                                 tCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAg                                       >  2:7896498/1‑93 (MQ=255)
                                                  cAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGc                                      <  2:6628225/93‑1 (MQ=255)
                                                   aaaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGATCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCt                                     >  1:6695656/1‑93 (MQ=255)
                                                   aaaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCt                                     >  1:2287620/1‑93 (MQ=255)
                                                   aaaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCt                                     >  1:5887340/1‑93 (MQ=255)
                                                    aaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCCATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTg                                    >  1:8738758/1‑93 (MQ=255)
                                                     aaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGc                                   <  1:2483003/93‑1 (MQ=255)
                                                      aCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCa                                  >  2:2110734/1‑93 (MQ=255)
                                                      aCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCa                                  >  2:2371579/1‑93 (MQ=255)
                                                         gATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGa                               >  2:5003141/1‑93 (MQ=255)
                                                         gATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGa                               >  2:3185525/1‑93 (MQ=255)
                                                            tCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCa                            <  1:5969472/93‑1 (MQ=255)
                                                            tCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCa                            <  1:4745323/93‑1 (MQ=255)
                                                              gTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATg                          >  2:1837942/1‑93 (MQ=255)
                                                               ttCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgc                         >  2:3538385/1‑93 (MQ=255)
                                                                tCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgca                        <  2:5507994/93‑1 (MQ=255)
                                                                tCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgca                        <  1:1604288/93‑1 (MQ=255)
                                                                tCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgca                        <  2:4118285/93‑1 (MQ=255)
                                                                tCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgca                        >  1:7981609/1‑93 (MQ=255)
                                                                 cAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcag                       >  2:15566/1‑93 (MQ=255)
                                                                 cAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcag                       <  1:3579164/93‑1 (MQ=255)
                                                                 cAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcag                       <  2:5397431/93‑1 (MQ=255)
                                                                  aGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcagc                      >  2:6773067/1‑93 (MQ=255)
                                                                  aGCAATCGAAGACGGTGGAGTGGAGCCGCATGAGAAGACAGGAATTAACGACGAGCTGTAGCTCTCAATTTCGAAGCGGCAGGAGCAGgcagc                      <  2:5663558/93‑1 (MQ=255)
                                                                   gCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcagca                     <  2:3611518/93‑1 (MQ=255)
                                                                     aaTCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACt                   >  2:8386941/1‑93 (MQ=255)
                                                                     aaTCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACt                   <  2:4650691/93‑1 (MQ=255)
                                                                      aTCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACtt                  <  1:4611043/93‑1 (MQ=255)
                                                                       tCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTg                 >  2:5214307/1‑93 (MQ=255)
                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc               <  1:3010818/93‑1 (MQ=255)
                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc               <  2:8106013/93‑1 (MQ=255)
                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc               >  1:6975343/1‑93 (MQ=255)
                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc               >  2:1633214/1‑93 (MQ=255)
                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc               <  2:5158230/93‑1 (MQ=255)
                                                                         gAAGACGGTGTAGAGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGAATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc               <  1:5218954/93‑1 (MQ=255)
                                                                          aaGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCt              >  1:4491268/1‑93 (MQ=255)
                                                                          aaGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCt              <  1:7620696/93‑1 (MQ=255)
                                                                          aaGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCt              <  2:8175757/93‑1 (MQ=255)
                                                                            gACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCGCTTGTCTAc            <  2:3277426/93‑1 (MQ=255)
                                                                            gACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTAc            <  2:2634779/93‑1 (MQ=255)
                                                                            gACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTAc            <  1:4021482/93‑1 (MQ=255)
                                                                             aCGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACa           >  1:1037675/1‑93 (MQ=255)
                                                                             aCGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACa           <  1:8577896/93‑1 (MQ=255)
                                                                              cGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACaa          <  1:4377508/93‑1 (MQ=255)
                                                                               ggTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACaaa         <  1:5368969/93‑1 (MQ=255)
                                                                                gtgtAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACaaaa        >  1:3839582/1‑93 (MQ=255)
                                                                                gtgtAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACaaaa        >  2:3924745/1‑93 (MQ=255)
                                                                                 tgtAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAt       >  1:6078388/1‑93 (MQ=255)
                                                                                  gtAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAtt      >  2:1779107/1‑93 (MQ=255)
                                                                                    aGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAtttt    >  1:8206148/1‑93 (MQ=255)
                                                                                      tGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAtttttt  <  1:6892472/93‑1 (MQ=255)
                                                                                          |                                                                                        
CGATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTT  >  NC_000913/1202781‑1202959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: