Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,212,474 A→G intergenic (‑144/+77) ycgX ← / ← ycgE hypothetical protein/putative transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,212,4740AG99.3% 989.4 / ‑3.3 289intergenic (‑144/+77)ycgX/ycgEhypothetical protein/putative transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (127/159);  total (129/160)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.32e-01

Only 100 of 295 total aligned reads displayed.

TTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGA  >  NC_000913/1212384‑1212563
                                                                                          |                                                                                         
ttACCACTTCGATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCg                                                                                         <  1:6185757/93‑1 (MQ=255)
ttACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCg                                                                                         >  1:8315528/1‑93 (MQ=255)
   ccACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGAc                                                                                      <  1:103904/93‑1 (MQ=255)
    cACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCTGAcc                                                                                     >  2:6547138/1‑93 (MQ=255)
    cACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGAcc                                                                                     <  1:5344616/93‑1 (MQ=255)
      cTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAg                                                                                   <  2:3162995/93‑1 (MQ=255)
       ttCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGc                                                                                  >  1:2912309/1‑93 (MQ=255)
       ttCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGc                                                                                  >  1:6230189/1‑93 (MQ=255)
          aaTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTcc                                                                               <  2:4846532/93‑1 (MQ=255)
           aTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCg                                                                              >  1:7556841/1‑93 (MQ=255)
            tCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCgg                                                                             >  2:4008000/1‑93 (MQ=255)
             cTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGt                                                                            >  2:7679575/1‑93 (MQ=255)
             cTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGt                                                                            >  1:5797818/1‑93 (MQ=255)
               ggTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTAc                                                                          >  2:7464795/1‑93 (MQ=255)
               ggTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTAc                                                                          >  1:1523316/1‑93 (MQ=255)
                 tCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACaa                                                                        <  1:8536604/93‑1 (MQ=255)
                   tGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAAc                                                                      >  1:24979/1‑93 (MQ=255)
                     tCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGc                                                                    <  2:2785110/93‑1 (MQ=255)
                     tCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGc                                                                    >  1:3418152/1‑93 (MQ=255)
                     tCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCCCCGGTACAAACGc                                                                    <  1:1274481/93‑1 (MQ=255)
                       cTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCCGCTCCGGTACAAACGCtg                                                                  >  2:1896920/1‑93 (MQ=255)
                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  2:6930774/93‑1 (MQ=255)
                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  2:6601045/93‑1 (MQ=255)
                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  1:7525632/93‑1 (MQ=255)
                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 >  2:6386427/1‑93 (MQ=255)
                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATAGCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  1:6289842/93‑1 (MQ=255)
                         ttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgtt                                                                <  2:5954278/93‑1 (MQ=255)
                          tGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgttg                                                               >  2:3869204/1‑93 (MQ=255)
                          tGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgttg                                                               <  2:5546551/93‑1 (MQ=255)
                           ggCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgttgt                                                              >  1:7263060/1‑93 (MQ=255)
                           ggCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGATCCGGTACAAACGCtgttgt                                                              >  2:4121773/1‑93 (MQ=255)
                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  1:5569110/93‑1 (MQ=255)
                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  2:1940310/93‑1 (MQ=255)
                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  1:3792286/93‑1 (MQ=255)
                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  2:1270905/93‑1 (MQ=255)
                                tgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGtt                                                         <  2:5704192/93‑1 (MQ=255)
                                 gATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTc                                                        <  1:2767400/93‑1 (MQ=255)
                                 gATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTc                                                        >  2:2232838/1‑93 (MQ=255)
                                  atatGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCa                                                       >  2:2642872/1‑93 (MQ=255)
                                   tatGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAg                                                      >  1:767965/1‑93 (MQ=255)
                                    atGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGa                                                     >  2:1065641/1‑93 (MQ=255)
                                    atGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGa                                                     <  1:6756575/93‑1 (MQ=255)
                                    atGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGa                                                     <  2:6227157/93‑1 (MQ=255)
                                      gTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTAGAAACGCTGTTGTGGGTTCAGAtt                                                   >  2:4756268/1‑93 (MQ=255)
                                      gTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGAtt                                                   <  1:8747731/93‑1 (MQ=255)
                                          agagTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATaa                                               >  1:3880578/1‑93 (MQ=255)
                                          agagTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATaa                                               >  1:302438/1‑93 (MQ=255)
                                            agTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCATCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACa                                             <  2:1389878/93‑1 (MQ=255)
                                            agTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACa                                             >  2:7798326/1‑93 (MQ=255)
                                             gtgtGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAt                                            >  2:7261096/1‑93 (MQ=255)
                                             gtggGATAGAGGGAATATCTGAATTCTCCCGGAGAGCATTTTGCAGCGGACCAGCTCCGGTACCAACGCTGATGTGGGTTCAGGTTATAACAt                                            >  2:7929010/1‑93 (MQ=255)
                                              tgtgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAtt                                           <  1:1765754/93‑1 (MQ=255)
                                              tgtgATAGAGGGAATATCTGAATTCTACCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAtt                                           >  2:2857054/1‑93 (MQ=255)
                                               gtgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTc                                          >  2:2981885/1‑93 (MQ=255)
                                               gtgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTc                                          <  1:1727824/93‑1 (MQ=255)
                                                 gATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTg                                        <  1:4127323/93‑1 (MQ=255)
                                                   tAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCCGTTGTGGGTTCAGATTATAACATTCTGTc                                      >  1:5926759/1‑93 (MQ=255)
                                                     gagGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTa                                    >  2:8250331/1‑93 (MQ=255)
                                                      agGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTaa                                   <  2:8477068/93‑1 (MQ=255)
                                                       gggAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAg                                  >  2:6038837/1‑93 (MQ=255)
                                                       gggAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAg                                  >  1:6795029/1‑93 (MQ=255)
                                                        ggAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAgg                                 <  2:5553266/93‑1 (MQ=255)
                                                         gAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAggg                                <  1:7440552/93‑1 (MQ=255)
                                                           atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc                              >  1:95798/1‑93 (MQ=255)
                                                           atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc                              <  1:6020607/93‑1 (MQ=255)
                                                           atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc                              >  1:8105355/1‑93 (MQ=255)
                                                             atCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCgg                            <  1:4672889/93‑1 (MQ=255)
                                                                tGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGAt                         >  1:1329230/1‑93 (MQ=255)
                                                                tGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGAt                         >  2:393937/1‑93 (MQ=255)
                                                                 gAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATa                        >  1:2653474/1‑93 (MQ=255)
                                                                 gAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATa                        <  1:6959381/93‑1 (MQ=255)
                                                                 gAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATa                        <  1:2238068/93‑1 (MQ=255)
                                                                  aaTTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATaa                       >  1:8641034/1‑93 (MQ=255)
                                                                    ttCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAg                     <  1:850071/93‑1 (MQ=255)
                                                                    ttCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAg                     >  1:5474155/1‑93 (MQ=255)
                                                                       tcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTg                  <  2:6697386/93‑1 (MQ=255)
                                                                       tcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTg                  >  2:5002978/1‑93 (MQ=255)
                                                                       tcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTg                  >  1:5666131/1‑93 (MQ=255)
                                                                        cccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGa                 <  1:2083891/93‑1 (MQ=255)
                                                                        cccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGa                 >  2:1615054/1‑93 (MQ=255)
                                                                         ccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGGGaa                >  1:3831057/1‑93 (MQ=255)
                                                                          cGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGaaa               >  2:5233512/1‑93 (MQ=255)
                                                                            gTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAtt             <  1:4504319/93‑1 (MQ=255)
                                                                            gTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAtt             <  2:469608/93‑1 (MQ=255)
                                                                            gTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAtt             >  1:4079141/1‑93 (MQ=255)
                                                                             tGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTa            <  1:1380435/93‑1 (MQ=255)
                                                                             tGAGCATTTTCCAGCGGACCAGCTCCGGGACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTa            >  1:3641004/1‑93 (MQ=255)
                                                                              gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg           <  2:4332908/93‑1 (MQ=255)
                                                                              gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg           >  1:6921469/1‑93 (MQ=255)
                                                                              gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg           <  1:7811992/93‑1 (MQ=255)
                                                                               aGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgg          >  2:552112/1‑93 (MQ=255)
                                                                               aGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgg          <  1:5028525/93‑1 (MQ=255)
                                                                               aGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgg          <  2:3427791/93‑1 (MQ=255)
                                                                                gCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggg         <  2:92838/93‑1 (MQ=255)
                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTTTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  1:4185450/93‑1 (MQ=255)
                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  2:2537928/93‑1 (MQ=255)
                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  1:6567834/93‑1 (MQ=255)
                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        >  1:525258/1‑93 (MQ=255)
                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  1:4859847/93‑1 (MQ=255)
                                                                                  aTTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggggg       >  1:7927336/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGA  >  NC_000913/1212384‑1212563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: