Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,358,270 G→A G221G (GGC→GGT b1297 ← putative glutamine synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,358,2700GA99.7% 1006.9 / NA 291G221G (GGC→GGTb1297putative glutamine synthetase
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base A (114/174);  minor base C (0/1);  total (115/176)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 303 total aligned reads displayed.

TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC  >  NC_000913/1358180‑1358359
                                                                                          |                                                                                         
tAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAcc                                                                                         >  1:7554473/1‑93 (MQ=255)
tAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAcc                                                                                         <  1:3988501/93‑1 (MQ=255)
tAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAcc                                                                                         >  2:5774156/1‑93 (MQ=255)
 aGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCa                                                                                        <  1:5436255/93‑1 (MQ=255)
  gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAt                                                                                       <  1:6152690/93‑1 (MQ=255)
   tGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATc                                                                                      <  2:6450857/93‑1 (MQ=255)
    gCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCt                                                                                     >  1:8708973/1‑93 (MQ=255)
     ccAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTg                                                                                    <  1:730789/93‑1 (MQ=255)
       aGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGcc                                                                                  >  2:1395696/1‑93 (MQ=255)
         cgcATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCgg                                                                                <  1:8079017/93‑1 (MQ=255)
          gcATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGa                                                                               <  2:236205/93‑1 (MQ=255)
             tcatcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATc                                                                            >  2:4726356/1‑93 (MQ=255)
              catcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCa                                                                           <  1:3192365/93‑1 (MQ=255)
              catcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCa                                                                           >  1:1044385/1‑93 (MQ=255)
               atcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAg                                                                          <  1:5516287/93‑1 (MQ=255)
                tcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGc                                                                         <  2:7745227/93‑1 (MQ=255)
                tcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGc                                                                         <  1:5863746/93‑1 (MQ=255)
                tcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGc                                                                         <  2:6982461/93‑1 (MQ=255)
                 cGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCt                                                                        <  2:6946884/93‑1 (MQ=255)
                   cAGGCTTCCAGCACGTTATTAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGt                                                                      <  1:2655616/93‑1 (MQ=255)
                   cAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGt                                                                      >  1:623429/1‑93 (MQ=255)
                   cAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGt                                                                      >  2:1697338/1‑93 (MQ=255)
                    aGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTa                                                                     <  1:2835007/93‑1 (MQ=255)
                      gCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAAc                                                                   >  2:7954601/1‑93 (MQ=255)
                         tCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgc                                                                <  2:6641805/93‑1 (MQ=255)
                          ccAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgcg                                                               >  2:7665673/1‑93 (MQ=255)
                            aGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGcc                                                             >  1:4101249/1‑93 (MQ=255)
                            aGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGcc                                                             <  2:2480609/93‑1 (MQ=255)
                             gCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCa                                                            <  2:5988181/93‑1 (MQ=255)
                             gCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAACATCTGCCGGCATCAGCTGTAACTGCGCCa                                                            >  2:3149857/1‑93 (MQ=255)
                              cACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAg                                                           <  2:8803674/93‑1 (MQ=255)
                                cGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGtt                                                         >  2:8330933/1‑93 (MQ=255)
                                 gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc                                                        <  1:4781982/93‑1 (MQ=255)
                                 gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc                                                        >  2:2777419/1‑93 (MQ=255)
                                 gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc                                                        <  1:8298392/93‑1 (MQ=255)
                                 gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc                                                        >  2:630124/1‑93 (MQ=255)
                                  ttATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGttaa                                                       >  2:1073207/1‑91 (MQ=255)
                                  ttATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtca                                                       >  1:6892416/1‑93 (MQ=255)
                                    aTCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcatc                                                     <  2:3296419/93‑1 (MQ=255)
                                    aTCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcatc                                                     <  1:3500975/93‑1 (MQ=255)
                                     tCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcatca                                                    >  1:4652660/1‑93 (MQ=255)
                                      cAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCaa                                                   <  1:8446947/93‑1 (MQ=255)
                                       aGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAat                                                  <  1:1679936/93‑1 (MQ=255)
                                       aGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAat                                                  >  2:3703714/1‑93 (MQ=255)
                                        gTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAata                                                 <  1:7130047/93‑1 (MQ=255)
                                        gTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAata                                                 <  1:2071087/93‑1 (MQ=255)
                                        gTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAata                                                 <  2:214296/93‑1 (MQ=255)
                                         tATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAatat                                                <  2:6862686/93‑1 (MQ=255)
                                          aTGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATc                                               <  1:6354660/93‑1 (MQ=255)
                                           tGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCa                                              <  1:1337839/93‑1 (MQ=255)
                                             gTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAtt                                            >  2:6181512/1‑93 (MQ=255)
                                               aaaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGa                                          >  1:7302412/1‑93 (MQ=255)
                                               aaaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGa                                          <  1:915901/93‑1 (MQ=255)
                                               aaaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGa                                          <  2:7415490/93‑1 (MQ=255)
                                                aaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTATAACTGCGCCAGTTCATCAATATCATTGAg                                         >  2:5405723/1‑93 (MQ=255)
                                                 aGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAga                                        >  2:3488002/1‑92 (MQ=255)
                                                 aGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGc                                        >  2:867170/1‑93 (MQ=255)
                                                 aGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGc                                        <  2:5828905/93‑1 (MQ=255)
                                                  ggTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCa                                       <  2:4577506/93‑1 (MQ=255)
                                                  agTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCa                                       <  1:1986739/92‑1 (MQ=255)
                                                   gTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAc                                      <  1:3735297/93‑1 (MQ=255)
                                                   gTTGACTTCAAACTGACCCGGCTAGGCCTCCGAGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAc                                      <  1:4889531/93‑1 (MQ=255)
                                                    ttGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACg                                     >  1:7971300/1‑93 (MQ=255)
                                                     tGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGt                                    <  2:3060657/93‑1 (MQ=255)
                                                        tttCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCgg                                 <  2:1910569/93‑1 (MQ=255)
                                                         ttCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGc                                <  1:6707287/93‑1 (MQ=255)
                                                            aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa                             <  1:4255940/93‑1 (MQ=255)
                                                            aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa                             >  1:5944603/1‑93 (MQ=255)
                                                            aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa                             >  2:1972030/1‑93 (MQ=255)
                                                            aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa                             >  1:3372969/1‑93 (MQ=255)
                                                             aaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAg                            <  1:3022932/93‑1 (MQ=255)
                                                              aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAgg                           >  2:5052173/1‑92 (MQ=255)
                                                              aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGt                           <  2:4383060/93‑1 (MQ=255)
                                                              aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGt                           >  2:4974722/1‑93 (MQ=255)
                                                              aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGt                           <  1:3312280/93‑1 (MQ=255)
                                                               cggACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTg                          <  2:820550/91‑1 (MQ=255)
                                                               cTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTg                          <  2:7709496/93‑1 (MQ=255)
                                                                  aCCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGtt                       >  2:5147328/1‑93 (MQ=255)
                                                                  aCCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGtt                       <  2:7072975/93‑1 (MQ=255)
                                                                   cccGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTg                      >  1:2480587/1‑93 (MQ=255)
                                                                    ccGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGa                     <  1:1483320/93‑1 (MQ=255)
                                                                     cGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAg                    <  1:186891/93‑1 (MQ=255)
                                                                     cGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAg                    >  2:227709/1‑93 (MQ=255)
                                                                      ggCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAgg                   <  2:3747078/93‑1 (MQ=255)
                                                                      ggCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAgg                   <  1:7049059/93‑1 (MQ=255)
                                                                       gCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGt                  >  2:8081871/1‑93 (MQ=255)
                                                                       gCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGt                  <  1:6596658/93‑1 (MQ=255)
                                                                        cGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGtt                 <  1:692791/93‑1 (MQ=255)
                                                                         gAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTa                >  1:3270726/1‑93 (MQ=255)
                                                                         gAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTa                <  1:747390/93‑1 (MQ=255)
                                                                          aGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGCTAt               >  1:5780380/1‑93 (MQ=255)
                                                                             ccTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCaa            <  1:2234862/93‑1 (MQ=255)
                                                                             ccTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCaa            >  1:5283205/1‑93 (MQ=255)
                                                                               tCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACg          >  1:5645993/1‑93 (MQ=255)
                                                                                 aGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGa        <  2:3618974/93‑1 (MQ=255)
                                                                                 aGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGa        <  1:3944007/93‑1 (MQ=255)
                                                                                 aGCAACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGa        <  2:5667460/93‑1 (MQ=255)
                                                                                  gCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAg       <  2:177148/93‑1 (MQ=255)
                                                                                   cGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGt      >  1:3455794/1‑93 (MQ=255)
                                                                                      ccGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTaaa   <  1:7779685/93‑1 (MQ=255)
                                                                                          |                                                                                         
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC  >  NC_000913/1358180‑1358359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: