BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,672,622	T→C	L229P (CTG→CCG)	b1601 →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,672,622	0	T	C	100.0%	938.5 / NA	272	L229P (CTG→CCG)	b1601	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (124/148); total (124/148)

Only 100 of 282 total aligned reads displayed.

TGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT  >  NC_000913/1672532‑1672711

tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  2:283881/1‑93 (MQ=255)

tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  2:3214880/1‑93 (MQ=255)

tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  2:5106872/1‑93 (MQ=255)

  aaaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGcc                                                                                       <  2:6117923/93‑1 (MQ=255)

  aaaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGcc                                                                                       <  1:8096162/93‑1 (MQ=255)

   aaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCTCTTCGCTTTTGTCTGGGGATTGCCGGCCt                                                                                      >  1:7675081/1‑93 (MQ=255)

   aaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCt                                                                                      >  2:6165328/1‑93 (MQ=255)

   aaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCt                                                                                      >  1:4371624/1‑93 (MQ=255)

    aaCAGCCATCAGCATCATCACCGGCGTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCtt                                                                                     <  2:3460605/93‑1 (MQ=255)

    aaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCtt                                                                                     <  2:2422987/93‑1 (MQ=255)

    aaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCtt                                                                                     >  1:3180909/1‑93 (MQ=255)

     aCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCttt                                                                                    <  1:6241087/93‑1 (MQ=255)

      cAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTg                                                                                   <  1:2854517/93‑1 (MQ=255)

         ccATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTgcgc                                                                                >  2:7001876/1‑93 (MQ=255)

          cATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCt                                                                               >  2:8389705/1‑93 (MQ=255)

          cATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCt                                                                               >  2:955930/1‑93 (MQ=255)

           aTCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCtt                                                                              <  1:6078766/93‑1 (MQ=255)

              aGCATCATCGCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAt                                                                           <  2:7638942/93‑1 (MQ=255)

              aGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAt                                                                           <  2:2649683/93‑1 (MQ=255)

                catcatCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTa                                                                         <  1:3686148/93‑1 (MQ=255)

                catcatCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTa                                                                         <  1:1570389/93‑1 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       <  2:3320173/93‑1 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       <  2:576213/93‑1 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       >  2:7871334/1‑93 (MQ=255)

                    atcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATc                                                                     >  1:4147954/1‑93 (MQ=255)

                      tcccGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATccc                                                                   <  1:1276757/91‑1 (MQ=255)

                       aCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCg                                                                  >  1:2073012/1‑93 (MQ=255)

                       aCCGGCCTGGTCGCCTGGGAGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCg                                                                  >  1:7150994/1‑93 (MQ=255)

                         cGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGaa                                                                <  2:4615967/93‑1 (MQ=255)

                          ggCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAat                                                               <  1:3425749/93‑1 (MQ=255)

                           gCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAata                                                              >  1:2914704/1‑93 (MQ=255)

                           gCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAata                                                              >  1:5229199/1‑93 (MQ=255)

                            ccTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAatat                                                             <  2:5972103/93‑1 (MQ=255)

                              tGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTg                                                           >  1:5711340/1‑93 (MQ=255)

                                gTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGt                                                         <  2:768691/93‑1 (MQ=255)

                                gTCGCCTGGGCGATGCTCGCCGCACGCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTGCATCCCGAATATTGGt                                                         <  2:5522261/93‑1 (MQ=255)

                                  cGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTc                                                       <  2:6397983/93‑1 (MQ=255)

                                     cTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGt                                                    >  2:4690918/1‑93 (MQ=255)

                                      tGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTc                                                   >  1:5624499/1‑93 (MQ=255)

                                       gggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTcc                                                  <  2:6213974/93‑1 (MQ=255)

                                       gggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTcc                                                  >  2:6927423/1‑93 (MQ=255)

                                        ggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCt                                                 >  1:1464809/1‑93 (MQ=255)

                                         gCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTCATTACATCCCGAATATTGGTTCAGTCCTc                                                >  1:5541988/1‑93 (MQ=255)

                                         gCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTc                                                <  1:892431/93‑1 (MQ=255)

                                          cGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcg                                               <  2:3844025/93‑1 (MQ=255)

                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              >  1:6790043/1‑93 (MQ=255)

                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              >  1:5761116/1‑93 (MQ=255)

                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              <  2:3412342/93‑1 (MQ=255)

                                              gCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGc                                           >  1:8232709/1‑93 (MQ=255)

                                               cTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCa                                          >  1:1617310/1‑93 (MQ=255)

                                               cTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCa                                          >  1:4594374/1‑93 (MQ=255)

                                               cTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCa                                          >  1:5426441/1‑93 (MQ=255)

                                                tCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGTCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCaa                                         <  1:8437167/93‑1 (MQ=255)

                                                tCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCaa                                         <  1:3864844/93‑1 (MQ=255)

                                                 cgccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGCATATTGGTTCAGTCCTCGCGCCAAt                                        >  1:1329227/1‑93 (MQ=255)

                                                 cgccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAAt                                        <  1:7898037/93‑1 (MQ=255)

                                                  gccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATc                                       >  1:2655808/1‑93 (MQ=255)

                                                  gccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATc                                       <  1:1253699/93‑1 (MQ=255)

                                                    cgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccc                                     <  2:6519829/93‑1 (MQ=255)

                                                     gcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccc                                    <  2:1799916/93‑1 (MQ=255)

                                                     gcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccc                                    >  2:5729070/1‑93 (MQ=255)

                                                      cACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccccc                                   <  1:4615705/93‑1 (MQ=255)

                                                       ccTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccccc                                  <  2:8084496/92‑1 (MQ=255)

                                                       aCTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccccc                                  <  2:1281696/93‑1 (MQ=255)

                                                        cTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCt                                 >  2:4455776/1‑93 (MQ=255)

                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                >  2:5538345/1‑93 (MQ=255)

                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                <  2:272287/93‑1 (MQ=255)

                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                >  1:5208263/1‑93 (MQ=255)

                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                >  2:3578438/1‑93 (MQ=255)

                                                          cGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTAt                               <  1:2209655/93‑1 (MQ=255)

                                                          cGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTAt                               <  1:338450/93‑1 (MQ=255)

                                                           gATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATc                              <  1:604026/93‑1 (MQ=255)

                                                            aTGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCg                             >  2:5426738/1‑93 (MQ=255)

                                                             tGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGc                            >  2:7112227/1‑93 (MQ=255)

                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           <  1:4799761/93‑1 (MQ=255)

                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           <  2:4926964/93‑1 (MQ=255)

                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           >  2:2106438/1‑93 (MQ=255)

                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           >  1:4106719/1‑93 (MQ=255)

                                                                tcgcttcgctTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCa                         >  1:6499284/1‑93 (MQ=255)

                                                                  gcttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAgg                       >  1:5379061/1‑93 (MQ=255)

                                                                   cttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGt                      >  1:1832768/1‑93 (MQ=255)

                                                                   cttcgattTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGt                      <  1:3053770/93‑1 (MQ=255)

                                                                    ttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGtc                     >  1:7541265/1‑92 (MQ=255)

                                                                    ttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTa                     >  1:2429434/1‑93 (MQ=255)

                                                                    ttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTa                     <  2:2302769/93‑1 (MQ=255)

                                                                    ttcgctgTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTa                     <  1:4459773/93‑1 (MQ=255)

                                                                     tcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTAc                    <  1:1498651/93‑1 (MQ=255)

                                                                      cgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCACTATCGCTCAGGTACt                   <  1:7980187/93‑1 (MQ=255)

                                                                        cttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTgg                 <  1:7102454/93‑1 (MQ=255)

                                                                         ttttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTggg                >  1:4898763/1‑92 (MQ=255)

                                                                         ttttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGgt                >  2:7238128/1‑93 (MQ=255)

                                                                         ttttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATACCCCCTATCGCTCAGGTACTGgt                >  1:3506868/1‑93 (MQ=255)

                                                                          tttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGgtg               <  2:7416838/93‑1 (MQ=255)

                                                                            tGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGtt             <  1:6818741/93‑1 (MQ=255)

                                                                                tGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAAt         >  2:428335/1‑93 (MQ=255)

                                                                                      ttGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTc   >  1:6608234/1‑93 (MQ=255)

                                                                                      ttGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTc   <  2:6747934/93‑1 (MQ=255)

                                                                                       tGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCt  <  1:7403873/93‑1 (MQ=255)

                                                                                       tGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCt  <  2:7913554/93‑1 (MQ=255)

                                                                                       tGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCt  <  1:7287016/93‑1 (MQ=255)

TGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT  >  NC_000913/1672532‑1672711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`