Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,905,091 T→C intergenic (‑7/+159) yebH ← / ← cspC hypothetical protein/cold shock protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,905,0910TC100.0% 1110.6 / NA 328intergenic (‑7/+159)yebH/cspChypothetical protein/cold shock protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (171/157);  total (171/157)

Only 100 of 345 total aligned reads displayed.

ATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAA  >  NC_000913/1905001‑1905180
                                                                                          |                                                                                         
atCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAAcccc                                                                                         <  1:2236460/93‑1 (MQ=255)
   aaaCTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGc                                                                                      >  1:6678823/1‑93 (MQ=255)
     aCTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAg                                                                                    <  1:2708131/93‑1 (MQ=255)
       tGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGa                                                                                  >  1:8137775/1‑93 (MQ=255)
        gATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACACCCCCGGCAGGAt                                                                                 >  2:1870616/1‑93 (MQ=255)
         aTGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATa                                                                                <  1:2959551/93‑1 (MQ=255)
          tGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATAc                                                                               >  2:6128288/1‑93 (MQ=255)
          tGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATAc                                                                               >  1:8281123/1‑93 (MQ=255)
           gTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACt                                                                              >  1:3769520/1‑93 (MQ=255)
            gcGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTa                                                                             <  1:1201999/92‑1 (MQ=255)
                tGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAgg                                                                         >  1:8621025/1‑93 (MQ=255)
                tGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAgg                                                                         >  1:882488/1‑93 (MQ=255)
                tGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAgg                                                                         <  2:7041770/93‑1 (MQ=255)
                 ggggACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGc                                                                        <  1:7678/93‑1 (MQ=255)
                 ggggACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGc                                                                        >  1:5255578/1‑93 (MQ=255)
                 ggggACAGATATAGCTGTTTTTTCCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGc                                                                        <  2:6715471/93‑1 (MQ=255)
                  gggACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGcc                                                                       >  1:3202210/1‑93 (MQ=255)
                  gggACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGcc                                                                       <  1:3723706/93‑1 (MQ=255)
                   ggACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCg                                                                      >  2:5766502/1‑93 (MQ=255)
                      cAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCaa                                                                   >  2:4825189/1‑93 (MQ=255)
                       aGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAg                                                                  <  1:3490216/93‑1 (MQ=255)
                       aGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAg                                                                  <  2:5266734/93‑1 (MQ=255)
                       aGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAg                                                                  <  1:1266568/93‑1 (MQ=255)
                        gATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAgt                                                                 <  1:7169889/93‑1 (MQ=255)
                        gATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAgt                                                                 >  1:4392559/1‑93 (MQ=255)
                        gATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAgt                                                                 >  1:6431470/1‑93 (MQ=255)
                        gATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAAACCCAGCAGGATACTAAAGGCCGCAAgt                                                                 >  2:5389804/1‑93 (MQ=255)
                          tataGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAgtgt                                                               <  2:8229210/93‑1 (MQ=255)
                          tataGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGGGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAgtgc                                                               >  1:3905593/1‑92 (MQ=255)
                           ataGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTa                                                              >  1:1642011/1‑93 (MQ=255)
                            taGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTaa                                                             <  2:3416340/93‑1 (MQ=255)
                            taGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTaa                                                             >  2:1243056/1‑93 (MQ=255)
                            taGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTaa                                                             <  2:2578153/93‑1 (MQ=255)
                            taGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTaa                                                             <  2:7428289/93‑1 (MQ=255)
                              gCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAAcg                                                           <  2:4292109/93‑1 (MQ=255)
                              gCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAAcg                                                           >  2:696889/1‑93 (MQ=255)
                              gCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAAcg                                                           <  2:1605150/93‑1 (MQ=255)
                               cTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAAcgc                                                          <  1:5993600/93‑1 (MQ=255)
                                tGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAAcgcg                                                         >  2:1167467/1‑93 (MQ=255)
                                 gTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGa                                                        >  1:8489494/1‑93 (MQ=255)
                                    tttttCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATc                                                     <  2:7580111/93‑1 (MQ=255)
                                      tttCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAc                                                   >  2:1568489/1‑93 (MQ=255)
                                        tCACGCGAAAGAGGCTGATGGCAAAGTGGACAGTAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAcgc                                                 <  1:1456785/93‑1 (MQ=255)
                                        tCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAACAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAcgc                                                 <  1:3141014/93‑1 (MQ=255)
                                        tCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAcgc                                                 <  2:5067914/93‑1 (MQ=255)
                                        tCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAcgc                                                 <  1:3321711/93‑1 (MQ=255)
                                        tCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAcgc                                                 >  2:4609564/1‑93 (MQ=255)
                                         cACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAcgcg                                                <  2:3804682/93‑1 (MQ=255)
                                         cACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCAcgcg                                                >  2:1447436/1‑93 (MQ=255)
                                          aCGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACgcgg                                               >  2:836278/1‑93 (MQ=255)
                                           cgcgAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACgcggc                                              >  1:4738175/1‑93 (MQ=255)
                                             cgAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGcggcgg                                            <  1:3655756/93‑1 (MQ=255)
                                             cgAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGcggcgg                                            <  2:3261278/93‑1 (MQ=255)
                                              gAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCggg                                           >  1:2317347/1‑93 (MQ=255)
                                                aaGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGGAAGTGTAAAGCGAATCACGCGGCGGGCa                                         >  1:4997576/1‑93 (MQ=255)
                                                aaGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCa                                         >  2:4451020/1‑93 (MQ=255)
                                                  gagGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCaaa                                       <  2:6847654/93‑1 (MQ=255)
                                                  gagGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCaaa                                       >  1:75289/1‑93 (MQ=255)
                                                   agGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAat                                      >  1:70178/1‑93 (MQ=255)
                                                    ggCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAata                                     >  1:4559662/1‑93 (MQ=255)
                                                      cTGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATc                                   <  1:5748670/93‑1 (MQ=255)
                                                       tGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATcc                                  <  1:1875564/93‑1 (MQ=255)
                                                       tGATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATcc                                  >  2:1172993/1‑93 (MQ=255)
                                                        gATGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCg                                 >  2:2460152/1‑93 (MQ=255)
                                                          tGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGaa                               >  1:5079151/1‑93 (MQ=255)
                                                          tGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGaa                               >  2:3455289/1‑93 (MQ=255)
                                                          tGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGaa                               <  1:5635199/93‑1 (MQ=255)
                                                          tGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGaa                               <  1:2505805/93‑1 (MQ=255)
                                                          tGGCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGaa                               <  2:227688/93‑1 (MQ=255)
                                                          tGGCAAAGTGGACAGGAAAAAGACAGGACAACCCCCGCAGGATACTAAAGGCCGCAAGGGTAACGCGAATCCCGCGGCGGGCAAAGATCCGaa                               <  1:6055075/93‑1 (MQ=255)
                                                          gggCAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGaa                               <  1:3014252/92‑1 (MQ=255)
                                                             cAAAGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGc                            <  2:2872078/93‑1 (MQ=255)
                                                              aaaGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGcc                           <  1:7326294/93‑1 (MQ=255)
                                                              aaaGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGcc                           >  2:6391168/1‑93 (MQ=255)
                                                              aaaGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGcc                           >  2:6230919/1‑93 (MQ=255)
                                                               aaGTGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCa                          >  1:1311946/1‑93 (MQ=255)
                                                                  tGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGa                       <  1:4095682/93‑1 (MQ=255)
                                                                  tGGACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGa                       <  2:1758172/93‑1 (MQ=255)
                                                                  gggACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGa                       <  1:101068/92‑1 (MQ=255)
                                                                   ggACAGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAg                      <  1:6616726/93‑1 (MQ=255)
                                                                       aagAAAAAAACATTACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGaa                  <  1:4913457/91‑1 (MQ=255)
                                                                       aGGAAAAAGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGaa                  <  1:6328912/93‑1 (MQ=255)
                                                                          aaaaaGACATGACATCCCCGGCAGGATACTAAAGGCCGCAAGTGTACCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGAt               <  2:3145232/93‑1 (MQ=255)
                                                                          aaaaaGACATGACAACCCCGGCAGTATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGAt               <  2:8818983/93‑1 (MQ=255)
                                                                          aaaaaGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGAt               <  1:5373374/93‑1 (MQ=255)
                                                                           aaaaGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATa              <  2:8025378/93‑1 (MQ=255)
                                                                           aaaaGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATa              >  1:115617/1‑93 (MQ=255)
                                                                             aaGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATaaa            >  1:8411401/1‑93 (MQ=255)
                                                                             aaGACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATaaa            <  1:6803709/93‑1 (MQ=255)
                                                                               gACATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGc          >  2:136066/1‑93 (MQ=255)
                                                                                aCATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCa         >  1:7806477/1‑93 (MQ=255)
                                                                                 cATGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCAt        <  1:3852389/93‑1 (MQ=255)
                                                                                  aTGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATa       <  2:5980590/93‑1 (MQ=255)
                                                                                  aTGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATa       >  2:7726256/1‑93 (MQ=255)
                                                                                  aTGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATa       <  1:289360/93‑1 (MQ=255)
                                                                                   tGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAg      >  2:536343/1‑93 (MQ=255)
                                                                                   tGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAg      >  2:4148193/1‑93 (MQ=255)
                                                                                   tGACAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAg      >  1:1757265/1‑93 (MQ=255)
                                                                                      cAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGTGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTaa   <  2:4345831/93‑1 (MQ=255)
                                                                                      cAACCCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTaa   <  2:7687829/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAA  >  NC_000913/1905001‑1905180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: