Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,359,592 T→C T214A (ACC→GCC)  b2248 ← putative regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,359,5920TC99.7% 978.9 / ‑4.8 287T214A (ACC→GCC) b2248putative regulator
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (146/139);  total (147/140)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.27e-01

Only 100 of 310 total aligned reads displayed.

CCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGC  >  NC_000913/2359502‑2359681
                                                                                          |                                                                                         
cccTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCaa                                                                                         <  1:8455805/93‑1 (MQ=255)
cccTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCaa                                                                                         <  2:4548440/93‑1 (MQ=255)
cccTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCaa                                                                                         <  2:528106/93‑1 (MQ=255)
cccTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCaa                                                                                         >  1:259290/1‑93 (MQ=255)
 ccTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCGCGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAg                                                                                        >  1:2741732/1‑93 (MQ=255)
  cTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGc                                                                                       <  2:2519514/93‑1 (MQ=255)
         aGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCCAGCTCGTTAt                                                                                >  2:3104602/1‑93 (MQ=255)
         aGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTAt                                                                                >  1:803916/1‑93 (MQ=255)
          ggCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCCAGCTCGTTAtt                                                                               >  2:6284658/1‑93 (MQ=255)
          ggCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTAtt                                                                               >  2:6926680/1‑93 (MQ=255)
          ggCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCAGCAAGCTCGTTAta                                                                               >  1:6384862/1‑92 (MQ=255)
           gCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTg                                                                              <  1:1024779/93‑1 (MQ=255)
            cAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTgg                                                                             >  2:116966/1‑93 (MQ=255)
              aTGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCg                                                                           >  2:103486/1‑93 (MQ=255)
                  ccTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTaa                                                                       <  1:6889254/93‑1 (MQ=255)
                    ttGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAac                                                                     <  1:6507280/93‑1 (MQ=255)
                    ttGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAac                                                                     >  2:7986865/1‑93 (MQ=255)
                      gCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAacac                                                                   >  1:2001287/1‑93 (MQ=255)
                       cccGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACAcc                                                                  <  1:7783617/93‑1 (MQ=255)
                        cctccAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCTCCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCg                                                                 <  1:3771293/90‑1 (MQ=255)
                        ccGCCAGATAATCACGGTATTCTTCGTTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCg                                                                 <  1:8678041/93‑1 (MQ=255)
                        ccGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCg                                                                 <  1:6691575/93‑1 (MQ=255)
                         ctccAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCgg                                                                <  2:6359123/91‑1 (MQ=255)
                         cGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCgg                                                                >  2:4882824/1‑93 (MQ=255)
                         cGCCAGATAATCACGGTATTCTACATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCgg                                                                <  2:3913192/93‑1 (MQ=255)
                          gCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGgc                                                               >  1:5429512/1‑93 (MQ=255)
                          gCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGgc                                                               >  2:1930135/1‑93 (MQ=255)
                           ccAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCgggg                                                              >  1:1986947/1‑91 (MQ=255)
                           ccAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCgggc                                                              >  1:2529392/1‑91 (MQ=255)
                              gATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAg                                                           >  1:7346418/1‑93 (MQ=255)
                               aTAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGc                                                          <  1:604292/93‑1 (MQ=255)
                               aTAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTAGCGTTAAACACCGGcgccgc                                                          >  2:8571990/1‑93 (MQ=255)
                                   tCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGaca                                                      <  2:4091431/93‑1 (MQ=255)
                                     aCGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGAcaca                                                    <  2:3555002/93‑1 (MQ=255)
                                      cGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCACAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACaa                                                   >  2:50027/1‑93 (MQ=255)
                                       ggTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAAc                                                  <  1:380759/93‑1 (MQ=255)
                                         tATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGGTCGTTATTGGCGTTAAACACAGGCGCAGCGACACAAAgg                                                >  1:3939788/1‑93 (MQ=255)
                                         tATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACgg                                                >  2:3366183/1‑93 (MQ=255)
                                         tATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACgg                                                <  1:5768598/93‑1 (MQ=255)
                                           ttcttcATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGAc                                              >  1:225847/1‑93 (MQ=255)
                                            tcttcATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACa                                             <  1:1001531/93‑1 (MQ=255)
                                               tcATTTTTTTGTAAGCCGATTCCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCg                                          <  2:3045600/93‑1 (MQ=255)
                                               tcATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCg                                          <  2:673419/93‑1 (MQ=255)
                                               tcATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCg                                          >  1:1437602/1‑93 (MQ=255)
                                                cATTGTTTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCgg                                         <  2:7789102/93‑1 (MQ=255)
                                                 aTTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGc                                        <  1:8182128/93‑1 (MQ=255)
                                                   tGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCga                                      >  1:5143882/1‑92 (MQ=255)
                                                      tttGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAAt                                   >  1:2977550/1‑93 (MQ=255)
                                                       ttGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTAATGACGTTAAACACCGGCGCAGCGACACAACGGACATCAGCGTAATc                                  >  1:4083596/1‑93 (MQ=255)
                                                        tGTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCt                                 <  2:2948457/93‑1 (MQ=255)
                                                         ttAAGCGGGTGCCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGACGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCtt                                <  2:7523927/92‑1 (MQ=255)
                                                         gTAAGCGGGTGCCGACCACCGAGATCGTAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCtt                                <  2:3955639/93‑1 (MQ=255)
                                                         gTAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCtt                                <  1:5489799/93‑1 (MQ=255)
                                                          tAAGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTc                               <  2:3786933/93‑1 (MQ=255)
                                                           aaGCGGGTACCGACCACCGAGATCGCAGCGGGAAGCTCGTTATTGGCGTTAAACACCGGCGCCGCGACACAAAAGACATCGGGGAAGTCTTCg                              >  2:3519313/1‑93 (MQ=255)
                                                           aaGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCg                              >  1:1912132/1‑93 (MQ=255)
                                                           aaGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCg                              <  2:5513538/93‑1 (MQ=255)
                                                            aGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGc                             >  2:6980146/1‑93 (MQ=255)
                                                            aGCGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGc                             <  1:4474478/93‑1 (MQ=255)
                                                              cGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGGGTAATCTTCGCCg                           >  1:7306722/1‑93 (MQ=255)
                                                              cGGGTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCg                           <  2:8152410/93‑1 (MQ=255)
                                                               gggTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGt                          <  1:2210639/93‑1 (MQ=255)
                                                                ggTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGtt                         <  1:2365571/93‑1 (MQ=255)
                                                                ggTACCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGtt                         >  1:1304870/1‑93 (MQ=255)
                                                                 gTACCGACCACCGAGATCGCAGCGGCAATCTCGTTAATGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTTAGCTTCGCCgcgt                        >  2:4137629/1‑90 (MQ=255)
                                                                   aCCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTgcc                      <  1:4345408/93‑3 (MQ=255)
                                                                   aCCGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTc                      <  2:8104933/93‑1 (MQ=255)
                                                                    ccGACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCa                     >  1:4697186/1‑93 (MQ=255)
                                                                      gACCACCGAGATCGCAGCGGCAATCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATa                   <  1:4975918/93‑1 (MQ=255)
                                                                      gACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATa                   >  1:4113792/1‑93 (MQ=255)
                                                                      gACCACCGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATa                   >  2:5302119/1‑93 (MQ=255)
                                                                      gACCACCGAGATCGCAGCGGCAAGCTCGTTATTAGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATa                   >  2:1430446/1‑93 (MQ=255)
                                                                       accaccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATac                  >  2:5891770/1‑92 (MQ=255)
                                                                       accaccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAg                  <  2:6599454/93‑1 (MQ=255)
                                                                       accaccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAg                  >  2:8711714/1‑93 (MQ=255)
                                                                       accaccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAg                  >  1:7686119/1‑93 (MQ=255)
                                                                       accaccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAg                  >  2:2671524/1‑93 (MQ=255)
                                                                        ccaccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGc                 >  1:1689215/1‑93 (MQ=255)
                                                                        ccaacGAGATCGCAGCGGCAAGCTCGTTATGGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGc                 <  1:1170720/93‑1 (MQ=255)
                                                                         caccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCt                >  1:308901/1‑93 (MQ=255)
                                                                         caccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCt                <  2:6160263/93‑1 (MQ=255)
                                                                          accGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTc               <  2:1667363/93‑1 (MQ=255)
                                                                           ccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGCCACAACGGACATCGACGTAATCTTCGCCGTTGTCATAGCTcc              >  1:5394127/1‑93 (MQ=255)
                                                                           ccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTcc              >  1:2895519/1‑93 (MQ=255)
                                                                           ccGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTcc              >  2:747415/1‑93 (MQ=255)
                                                                            cGAGATCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCa             <  2:685588/93‑1 (MQ=255)
                                                                            cGAGAACGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCa             <  1:5324748/93‑1 (MQ=255)
                                                                             gagaTCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAg            >  1:4870961/1‑93 (MQ=255)
                                                                              agaTCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGc           >  2:2323736/1‑93 (MQ=255)
                                                                               gaTCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGcc          >  1:5930699/1‑93 (MQ=255)
                                                                                aTCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGccc         <  1:6285946/93‑1 (MQ=255)
                                                                                 tCGCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCt        <  1:8548568/93‑1 (MQ=255)
                                                                                   gCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGa      <  2:5670654/93‑1 (MQ=255)
                                                                                   gCAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGa      <  1:8294565/93‑1 (MQ=255)
                                                                                    cAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGAc     <  1:1748030/93‑1 (MQ=255)
                                                                                    cAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGAc     <  1:5553889/93‑1 (MQ=255)
                                                                                    cAGCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGAc     <  1:3295311/93‑1 (MQ=255)
                                                                                     ggCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACg    >  2:7659420/2‑93 (MQ=255)
                                                                                      gCGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACgg   >  2:6522163/1‑93 (MQ=255)
                                                                                       cGGCAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGc  <  1:366139/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGC  >  NC_000913/2359502‑2359681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: