Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 269,425 A→G intergenic (‑19/‑41) perR ← / → yi91a putative transcriptional regulator LYSR‑type/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913269,4250AG99.7% 1085.4 / NA 309intergenic (‑19/‑41)perR/yi91aputative transcriptional regulator LYSR‑type/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (148/160);  minor base T (1/0);  total (149/160)
Fisher's exact test for biased strand distribution p-value = 4.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 318 total aligned reads displayed.

AAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAA  >  NC_000913/269335‑269514
                                                                                          |                                                                                         
aaaaGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTggg                                                                                         <  2:5624811/93‑1 (MQ=255)
  aaGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGa                                                                                       >  2:7023836/1‑93 (MQ=255)
  aaGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGa                                                                                       >  2:1024394/1‑93 (MQ=255)
   aGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGAt                                                                                      >  1:3011780/1‑93 (MQ=255)
     cTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGa                                                                                    >  1:6870832/1‑93 (MQ=255)
      tCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGaa                                                                                   <  1:7471377/93‑1 (MQ=255)
      tCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGaa                                                                                   >  1:574368/1‑93 (MQ=255)
       ccGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAg                                                                                  <  2:5488533/93‑1 (MQ=255)
         ggTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTg                                                                                <  2:692410/93‑1 (MQ=255)
         ggTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTg                                                                                <  1:1005377/93‑1 (MQ=255)
           tACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGt                                                                              >  1:6025503/1‑93 (MQ=255)
           tACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGt                                                                              <  2:3648271/93‑1 (MQ=255)
              gACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTa                                                                           <  2:7862270/93‑1 (MQ=255)
              gACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTa                                                                           >  1:4789977/1‑93 (MQ=255)
               aCCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTTGGGATGAAGTGTTTTAc                                                                          >  2:3046123/1‑93 (MQ=255)
               aCCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTAc                                                                          <  2:8232148/93‑1 (MQ=255)
                ccAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACt                                                                         >  2:1373201/1‑93 (MQ=255)
                 cAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTg                                                                        >  1:6255299/1‑93 (MQ=255)
                 cAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTg                                                                        <  2:6410293/93‑1 (MQ=255)
                   gCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGaa                                                                      >  1:1300386/1‑93 (MQ=255)
                   gCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGaa                                                                      >  1:6307957/1‑93 (MQ=255)
                      gCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAttt                                                                   <  1:3148302/93‑1 (MQ=255)
                      gCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAttt                                                                   >  1:507511/1‑93 (MQ=255)
                        ttCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTgg                                                                 >  1:2452040/1‑93 (MQ=255)
                        ttCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTgg                                                                 <  2:3112045/93‑1 (MQ=255)
                         tCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGc                                                                >  1:4283456/1‑93 (MQ=255)
                         tCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGc                                                                <  1:2139391/93‑1 (MQ=255)
                         tCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGc                                                                >  2:2233961/1‑93 (MQ=255)
                          cAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGcc                                                               >  2:8809102/1‑93 (MQ=255)
                            aaGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCAc                                                             <  1:8066816/93‑1 (MQ=255)
                              ggCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCt                                                           >  2:5175764/1‑93 (MQ=255)
                              ggCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCt                                                           >  1:7071794/1‑93 (MQ=255)
                              ggCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCt                                                           <  2:2010017/93‑1 (MQ=255)
                                 gcgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGaa                                                        >  2:5985931/1‑93 (MQ=255)
                                   gTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGGTGAAGTGGTTTACTTAATTTTGCCACCTTaaaa                                                      >  2:5017339/1‑91 (MQ=255)
                                   gTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACa                                                      >  1:1882882/1‑93 (MQ=255)
                                    tAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACag                                                     >  1:45077/1‑93 (MQ=255)
                                    tAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACag                                                     >  1:6568187/1‑93 (MQ=255)
                                    tAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACag                                                     >  1:2541342/1‑93 (MQ=255)
                                     aaCAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACaga                                                    >  1:5865257/1‑93 (MQ=255)
                                      aCAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACagag                                                   <  1:880609/93‑1 (MQ=255)
                                      aCAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACagag                                                   >  2:1231854/1‑93 (MQ=255)
                                      aCAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACagag                                                   >  1:7171371/1‑93 (MQ=255)
                                       cAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAgg                                                  <  2:4798833/93‑1 (MQ=255)
                                        aGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGt                                                 <  1:1124482/93‑1 (MQ=255)
                                        aGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGt                                                 >  2:5855383/1‑93 (MQ=255)
                                            ttAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGata                                             <  2:3267281/93‑1 (MQ=255)
                                            ttAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGata                                             >  2:3827908/1‑93 (MQ=255)
                                                agGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCt                                         >  2:2538839/1‑93 (MQ=255)
                                                 ggTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTc                                        >  1:2697831/1‑93 (MQ=255)
                                                  gTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCa                                       >  2:4001712/1‑93 (MQ=255)
                                                     cTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCt                                    <  1:3192463/93‑1 (MQ=255)
                                                     cTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCt                                    >  2:7461582/1‑93 (MQ=255)
                                                      ttttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTTGTTTACTGAATTTGTCCACCTGAACAGAGGTGATATGCTCACCTc                                   <  2:3377234/93‑1 (MQ=255)
                                                      ttttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTc                                   <  2:1115184/93‑1 (MQ=255)
                                                      ttttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTc                                   <  1:4872994/93‑1 (MQ=255)
                                                        ttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAg                                 <  2:1925930/93‑1 (MQ=255)
                                                          gCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaa                               <  2:4406125/93‑1 (MQ=255)
                                                          gCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaa                               >  2:6676324/1‑93 (MQ=255)
                                                           cTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaac                              <  1:7738208/93‑1 (MQ=255)
                                                            tAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaaca                             >  1:3899295/1‑93 (MQ=255)
                                                             aaGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaa                            >  1:3477312/1‑93 (MQ=255)
                                                              agagCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaac                           <  2:6170437/93‑1 (MQ=255)
                                                                 gCTTCATTCATGAATCCTTTTCTCTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAAcaca                        <  2:8618304/93‑1 (MQ=255)
                                                                 gCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAAcaca                        >  2:7280949/1‑93 (MQ=255)
                                                                 gCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAAcaca                        <  2:3484311/93‑1 (MQ=255)
                                                                  cTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAg                       >  2:5721442/1‑93 (MQ=255)
                                                                   ttcattcaTGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAgg                      <  1:4656736/93‑1 (MQ=255)
                                                                   ttcattcaTGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAgg                      >  2:8395114/1‑93 (MQ=255)
                                                                   ttcattcaTGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAgg                      >  1:2069544/1‑93 (MQ=255)
                                                                    tcattcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgt                     <  2:282734/93‑1 (MQ=255)
                                                                     cattcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgtg                    <  2:1692114/93‑1 (MQ=255)
                                                                     cattcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgtg                    <  1:8360230/93‑1 (MQ=255)
                                                                      attcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgtgt                   >  1:4176261/1‑93 (MQ=255)
                                                                      attcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgtgt                   <  1:6991557/93‑1 (MQ=255)
                                                                       ttcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTc                  <  1:2766652/93‑1 (MQ=255)
                                                                       ttcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTc                  <  1:407939/93‑1 (MQ=255)
                                                                       ttcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTc                  <  1:59954/93‑1 (MQ=255)
                                                                        tcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCa                 <  1:1435098/93‑1 (MQ=255)
                                                                        tcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCa                 <  2:8081170/93‑1 (MQ=255)
                                                                         catGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCAt                >  2:2133103/1‑93 (MQ=255)
                                                                          atGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATa               <  1:218822/93‑1 (MQ=255)
                                                                          atGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATa               >  1:8742117/1‑93 (MQ=255)
                                                                          atGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATa               >  2:6297175/1‑93 (MQ=255)
                                                                           tGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATaa              <  2:4186972/93‑1 (MQ=255)
                                                                           tGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATaa              <  1:840957/93‑1 (MQ=255)
                                                                             aaTCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATg            >  2:4259383/1‑93 (MQ=255)
                                                                               tCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaa          >  2:3423939/1‑93 (MQ=255)
                                                                                ccTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaa         <  2:2704335/93‑1 (MQ=255)
                                                                                 cTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaa        <  2:7573272/93‑1 (MQ=255)
                                                                                 cTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaa        >  1:1539779/1‑93 (MQ=255)
                                                                                 cTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaa        >  2:927834/1‑93 (MQ=255)
                                                                                    ttCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaaaaa     >  2:6037010/1‑93 (MQ=255)
                                                                                    ttCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaaaaa     <  1:3692768/93‑1 (MQ=255)
                                                                                    ttCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaaaaa     <  1:3372613/93‑1 (MQ=255)
                                                                                      cACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGa   <  2:658723/93‑1 (MQ=255)
                                                                                      cACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGa   <  2:2295432/93‑1 (MQ=255)
                                                                                      cACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGa   <  2:2730613/93‑1 (MQ=255)
                                                                                       aCTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGaa  <  2:2573183/93‑1 (MQ=255)
                                                                                       aCTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGaa  >  2:7986262/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAA  >  NC_000913/269335‑269514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: