Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,208,504 T→C V28A (GTT→GCT)  rpsU → 30S ribosomal subunit protein S21

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,208,5040TC99.0% 1332.9 / ‑2.0 392V28A (GTT→GCT) rpsU30S ribosomal subunit protein S21
Reads supporting (aligned to +/- strand):  ref base T (2/2);  new base C (212/176);  total (214/178)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 405 total aligned reads displayed.

GAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCG  >  NC_000913/3208413‑3208592
                                                                                           |                                                                                        
 agagACACATGCCGGTAATTAAAGTACGTGAAGACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAATCAGGTGCTc                                                                                        <  1:6918753/93‑1 (MQ=255)
  gagGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGctct                                                                                       >  2:765385/1‑93 (MQ=255)
   agGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTg                                                                                      >  1:4888526/1‑93 (MQ=255)
    ggCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTgg                                                                                     >  2:6546009/1‑93 (MQ=255)
       acaTGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCgg                                                                                  >  1:1759760/1‑93 (MQ=255)
        caTGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCAACAAAGCAGGTGCTCTGGCGGa                                                                                 >  1:4796578/1‑93 (MQ=255)
          tGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGCAg                                                                               >  2:3236098/1‑93 (MQ=255)
            ccGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGtt                                                                             >  2:1664552/1‑93 (MQ=255)
             cGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtc                                                                            >  1:3227581/1‑93 (MQ=255)
              gtaaaTTAAATTGCGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcg                                                                           <  1:4172962/90‑1 (MQ=255)
              ggTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcg                                                                           >  1:8404132/1‑93 (MQ=255)
              ggTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcg                                                                           >  2:4631625/1‑93 (MQ=255)
               gTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcgt                                                                          <  2:5549430/93‑1 (MQ=255)
               gTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcgt                                                                          >  1:406892/1‑93 (MQ=255)
                tAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGCAGTtcgtc                                                                         >  2:6144508/1‑93 (MQ=255)
                tAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcgtc                                                                         <  1:3814240/93‑1 (MQ=255)
                  aTTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcgtcgt                                                                       <  2:869997/93‑1 (MQ=255)
                  aTTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcgtcgt                                                                       >  2:6432781/1‑93 (MQ=255)
                   ttAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTtcgtcgtc                                                                      >  1:190739/1‑93 (MQ=255)
                    tAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGAGAAAAAGCAGGTGTTCTGGCGGAAGTtcctcgtcg                                                                     <  1:1515678/93‑1 (MQ=255)
                      aaGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTg                                                                   >  2:3029656/1‑93 (MQ=255)
                      aaGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTg                                                                   <  1:3717383/93‑1 (MQ=255)
                       aGTACGAGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGa                                                                  <  1:778818/93‑1 (MQ=255)
                         tACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGt                                                                <  2:5433173/93‑1 (MQ=255)
                          aCGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGtt                                                               >  1:5642113/1‑93 (MQ=255)
                           cGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTc                                                              <  2:4202880/93‑1 (MQ=255)
                           cGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTc                                                              <  2:1307540/93‑1 (MQ=255)
                            gTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCt                                                             <  1:4018243/93‑1 (MQ=255)
                            gTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCt                                                             >  2:7905614/1‑93 (MQ=255)
                               aaaaCGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATg                                                          <  2:7154257/93‑1 (MQ=255)
                                    gAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGaaaaa                                                     >  2:2252934/1‑93 (MQ=255)
                                    gAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGaaaaa                                                     >  1:8263281/1‑93 (MQ=255)
                                     aGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAc                                                    >  2:5094170/1‑93 (MQ=255)
                                     aGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAc                                                    >  1:3023031/1‑93 (MQ=255)
                                     aGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAc                                                    >  1:5492493/1‑93 (MQ=255)
                                     aGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAc                                                    <  2:5287940/93‑1 (MQ=255)
                                     aGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAc                                                    >  1:7261939/1‑93 (MQ=255)
                                      gCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAcc                                                   <  2:2034526/93‑1 (MQ=255)
                                      gCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAcc                                                   <  2:5799622/93‑1 (MQ=255)
                                      gCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAcc                                                   >  1:28525/1‑93 (MQ=255)
                                      gCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAcc                                                   >  2:3573760/1‑93 (MQ=255)
                                      gCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAcc                                                   >  2:337624/1‑93 (MQ=255)
                                      gCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAcc                                                   >  2:5127843/1‑93 (MQ=255)
                                       ccGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCg                                                  >  1:6971090/1‑93 (MQ=255)
                                        cGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGa                                                 >  1:4115829/1‑93 (MQ=255)
                                         gTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGAc                                                <  2:2828612/93‑1 (MQ=255)
                                         gTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGAc                                                >  1:534426/1‑93 (MQ=255)
                                          ttCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACt                                               <  1:5145869/93‑1 (MQ=255)
                                           tCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTa                                              >  1:3530308/1‑93 (MQ=255)
                                            cGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTAc                                             >  1:8040516/1‑93 (MQ=255)
                                             gACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTAcc                                            >  1:1635148/1‑93 (MQ=255)
                                             caCGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTAcc                                            <  1:922254/92‑1 (MQ=255)
                                              aCGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTAcca                                           >  1:6684844/1‑92 (MQ=255)
                                              aCGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCg                                           <  1:2882602/93‑1 (MQ=255)
                                               cGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGa                                          <  2:1368556/93‑1 (MQ=255)
                                                  aGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACg                                       <  2:8273003/93‑1 (MQ=255)
                                                   gCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGt                                      >  1:7020591/1‑93 (MQ=255)
                                                     tctGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTaa                                    <  1:6122683/93‑1 (MQ=255)
                                                      ctGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAg                                   <  2:4389597/93‑1 (MQ=255)
                                                      ctGCGTCGCGTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAg                                   <  1:7366022/93‑1 (MQ=255)
                                                         cGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgc                                <  1:2327681/93‑1 (MQ=255)
                                                          gTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcg                               >  1:4521355/1‑93 (MQ=255)
                                                          gTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcg                               <  1:2739103/93‑1 (MQ=255)
                                                          gTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcg                               <  1:5727784/93‑1 (MQ=255)
                                                           tCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcgc                              >  2:1899373/1‑93 (MQ=255)
                                                           tCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcgc                              >  1:4604225/1‑93 (MQ=255)
                                                           tCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcgc                              >  1:1104295/1‑93 (MQ=255)
                                                           tCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcgc                              >  2:6957490/1‑93 (MQ=255)
                                                           tCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgcgc                              >  2:3951360/1‑93 (MQ=255)
                                                            cGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCt                             >  1:6391963/1‑93 (MQ=255)
                                                              cTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTGGTCGTCGTGAGTCCTATGAAAAACTTACTACCTAACTTACTCGCGCTaa                           >  2:6694303/1‑93 (MQ=255)
                                                              cTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTaa                           <  1:7099629/93‑1 (MQ=255)
                                                              cTTCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTaa                           <  1:3434948/93‑1 (MQ=255)
                                                               ttCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACTTAAGCGCGCTaaa                          >  1:5810991/1‑93 (MQ=255)
                                                               ttCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTaaa                          <  1:3637445/93‑1 (MQ=255)
                                                               ttCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTaaa                          <  1:3617284/93‑1 (MQ=255)
                                                               ttCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTaaa                          <  1:5012470/93‑1 (MQ=255)
                                                                tCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCTTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAg                         <  2:4250953/93‑1 (MQ=255)
                                                                tCAAGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACCACCGAACGTAAGCGCGCTAAAg                         >  2:7797653/1‑93 (MQ=255)
                                                                  aaGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCt                       <  2:8479383/93‑1 (MQ=255)
                                                                  aaGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCt                       <  1:6511398/93‑1 (MQ=255)
                                                                  aaGCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCt                       >  1:8560961/1‑93 (MQ=255)
                                                                   aGCGTTCCGGCAAAAAAGGAGGTGCTCTGGGGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCtt                      <  2:7061182/93‑1 (MQ=255)
                                                                    gCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTc                     <  1:2542974/93‑1 (MQ=255)
                                                                    gCGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTc                     >  2:2648456/1‑93 (MQ=255)
                                                                     cGTTCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCt                    >  2:7673912/1‑93 (MQ=255)
                                                                       ttCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGc                  <  1:8479582/93‑1 (MQ=255)
                                                                       ttCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGc                  >  1:7438761/1‑93 (MQ=255)
                                                                        tCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCa                 <  2:6082274/93‑1 (MQ=255)
                                                                        tCCTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCa                 <  2:7444606/93‑1 (MQ=255)
                                                                         ccTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAg                <  1:2160232/93‑1 (MQ=255)
                                                                          cTGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGt               <  1:8148624/93‑1 (MQ=255)
                                                                           tGCGAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTg              <  1:8708282/93‑1 (MQ=255)
                                                                              gAAAAAGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGaaa           <  2:2441737/93‑1 (MQ=255)
                                                                               aaaaaGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGCACGTAAGCGCGCTAAAGCTTCTGCAGTGAAAc          >  2:1099555/1‑93 (MQ=255)
                                                                                   aGCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCa      >  2:3865787/1‑93 (MQ=255)
                                                                                    gCAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCAc     >  1:5969678/1‑93 (MQ=255)
                                                                                     cAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTTAcg    >  2:8070100/1‑93 (MQ=255)
                                                                                     cAGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCAcg    >  2:6923943/1‑93 (MQ=255)
                                                                                      aGGTGCTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCAcgc   <  1:1324776/93‑1 (MQ=255)
                                                                                           |                                                                                        
GAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCG  >  NC_000913/3208413‑3208592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: