Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,240,123 T→C M278V (ATG→GTG)  uxaA ← altronate hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,240,1230TC98.7% 1051.0 / 1.0 311M278V (ATG→GTG) uxaAaltronate hydrolase
Reads supporting (aligned to +/- strand):  ref base T (3/1);  new base C (153/154);  total (156/155)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.38e-01

Only 100 of 319 total aligned reads displayed.

AGCAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCATCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTAT  >  NC_000913/3240032‑3240212
                                                                                           |                                                                                         
aGCAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGGCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCATc                                                                                          <  1:1466048/93‑1 (MQ=255)
 gCAACTGCTCTGCGCCAAACATCTCCGTCACTTCGGTCACTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCg                                                                                         <  2:4494370/93‑1 (MQ=255)
 gCAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCg                                                                                         >  1:4187554/1‑93 (MQ=255)
 gCAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCg                                                                                         <  2:7240920/93‑1 (MQ=255)
  cAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCgg                                                                                        <  2:5438957/93‑1 (MQ=255)
  cAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCgg                                                                                        <  1:6864233/93‑1 (MQ=255)
  cAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCgg                                                                                        <  2:6365924/93‑1 (MQ=255)
    aCTGCTCTGCGCCAAACATCTCCGGCGCTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGt                                                                                      <  2:508765/93‑1 (MQ=255)
     cTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGtt                                                                                     >  2:1388230/1‑93 (MQ=255)
      tGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTa                                                                                    >  2:4671674/1‑93 (MQ=255)
         tctGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCa                                                                                 <  2:2842734/93‑1 (MQ=255)
         tctGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCa                                                                                 <  2:1317836/93‑1 (MQ=255)
          ctGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAg                                                                                >  2:7739294/1‑93 (MQ=255)
           tGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGt                                                                               >  2:4204870/1‑93 (MQ=255)
            gcgcCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTa                                                                              >  2:7890263/1‑93 (MQ=255)
              gcCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAAt                                                                            <  2:8081001/93‑1 (MQ=255)
                  aaCATCTCCGGCACTTCGTGCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCa                                                                        <  1:1901033/93‑1 (MQ=255)
                  aaCATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCa                                                                        <  2:3796570/93‑1 (MQ=255)
                   aCATCTCCGGCACTTCGGTCCGTTCGGGTGTCCCGCCGGTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAg                                                                       <  1:6911617/93‑1 (MQ=255)
                    cATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGa                                                                      >  2:5265535/1‑93 (MQ=255)
                     aTCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACACCCCAGCACCGGGTTAGCAGTAATACCAGaa                                                                     >  2:8590277/1‑93 (MQ=255)
                      tctcCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGaaa                                                                    <  2:5480302/93‑1 (MQ=255)
                       ctcCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACATAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAg                                                                   <  2:2659254/93‑1 (MQ=255)
                        cccGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGa                                                                  <  2:6228290/92‑1 (MQ=255)
                         ccGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGAc                                                                 <  2:5722615/93‑1 (MQ=255)
                             cACTTCGGTCGTTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCGCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTc                                                             <  2:1709555/93‑1 (MQ=255)
                             cACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTc                                                             <  1:2847162/93‑1 (MQ=255)
                              aCTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCa                                                            >  2:1047620/1‑93 (MQ=255)
                               cTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAg                                                           <  2:836776/93‑1 (MQ=255)
                               cTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAg                                                           >  1:3015189/1‑93 (MQ=255)
                                ttCGGTCAGTTCGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGATACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGa                                                          >  1:7835919/1‑93 (MQ=255)
                                 tCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGaa                                                         <  2:1750542/93‑1 (MQ=255)
                                  cGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAac                                                        <  1:1757752/93‑1 (MQ=255)
                                   ggTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAacc                                                       >  1:8075598/1‑93 (MQ=255)
                                     tCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGATTAGCAGTAATACCAGAAAGACCGTCAGAaccac                                                     <  2:8735594/93‑1 (MQ=255)
                                      cAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAaccacc                                                    >  1:6508500/1‑93 (MQ=255)
                                      cAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAaccacc                                                    <  2:6528406/93‑1 (MQ=255)
                                       aGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCg                                                   <  1:2136359/93‑1 (MQ=255)
                                        gTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGc                                                  >  1:5247275/1‑93 (MQ=255)
                                          aCGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCAc                                                <  1:1225187/93‑1 (MQ=255)
                                          aCGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCAc                                                >  2:592735/1‑93 (MQ=255)
                                          aCGGTAGTACAGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCAc                                                >  2:3997363/1‑93 (MQ=255)
                                           cGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACt                                               >  1:1980466/1‑93 (MQ=255)
                                           cGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACt                                               <  1:3225027/93‑1 (MQ=255)
                                             gtagtaCCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCATCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTcc                                             >  1:1853362/1‑93 (MQ=255)
                                             gtagtaCCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTcc                                             <  1:2992417/93‑1 (MQ=255)
                                             gtagtaCCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTcc                                             >  1:8497975/1‑93 (MQ=255)
                                              tagtaCCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCa                                            <  2:753969/93‑1 (MQ=255)
                                                gtaCCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGa                                          >  2:4965014/1‑93 (MQ=255)
                                                  aCCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGAcc                                        <  2:5331523/93‑1 (MQ=255)
                                                   ccgccgTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCa                                       >  1:6391132/1‑93 (MQ=255)
                                                      ccgTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAAc                                    <  2:7305237/93‑1 (MQ=255)
                                                        gTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACtt                                  >  1:4882619/1‑93 (MQ=255)
                                                        gTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACtt                                  <  2:3501076/93‑1 (MQ=255)
                                                        gTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACtt                                  >  1:7172177/1‑93 (MQ=255)
                                                        gTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACAGCACTCCAGACCAAACtt                                  >  1:4417848/1‑93 (MQ=255)
                                                         ttAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTc                                 <  1:7342912/93‑1 (MQ=255)
                                                          tAGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCCCTCCAGACCAAACTTCa                                <  2:6860232/93‑1 (MQ=255)
                                                           agcaagcaCGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAg                               <  2:8563081/93‑1 (MQ=255)
                                                           aGCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAg                               <  2:7122950/93‑1 (MQ=255)
                                                            gCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGt                              >  1:4339015/1‑93 (MQ=255)
                                                            gCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGt                              >  2:7864822/1‑93 (MQ=255)
                                                            gCAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGt                              <  1:7726376/93‑1 (MQ=255)
                                                             cAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGtt                             <  1:4679049/93‑1 (MQ=255)
                                                             cAATCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGtt                             <  1:8203390/93‑1 (MQ=255)
                                                              gaTCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTc                            >  1:2716329/2‑93 (MQ=255)
                                                              aaTCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTc                            >  1:314753/1‑93 (MQ=255)
                                                              aaTCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTc                            >  2:7615350/1‑93 (MQ=255)
                                                              aaTCACGTAGTCAGAGAAACGCCCCAGCACCGGATTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTc                            <  2:2778405/93‑1 (MQ=255)
                                                              aaTCACGCAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTc                            >  2:7430379/1‑93 (MQ=255)
                                                               aTCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCg                           >  2:3035679/1‑93 (MQ=255)
                                                               aTCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCg                           <  2:6134404/93‑1 (MQ=255)
                                                                tCACGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGc                          <  1:3992098/93‑1 (MQ=255)
                                                                  aCGTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTg                        >  1:3592814/1‑93 (MQ=255)
                                                                    gTAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAg                      >  1:3841468/1‑93 (MQ=255)
                                                                     tAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGt                     <  2:4636384/93‑1 (MQ=255)
                                                                     tAGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGt                     >  1:6198207/1‑93 (MQ=255)
                                                                      aGTCATAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGtt                    <  1:1019869/93‑1 (MQ=255)
                                                                      aGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGtt                    <  2:1423669/93‑1 (MQ=255)
                                                                      aGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGtt                    <  1:7243652/93‑1 (MQ=255)
                                                                      aGTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTCCGCTGAGtt                    <  1:2329838/93‑1 (MQ=255)
                                                                       gTCAGAGAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGttt                   <  1:239693/93‑1 (MQ=255)
                                                                          agagAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGcc                >  1:1082884/1‑93 (MQ=255)
                                                                          agagAAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGcc                <  2:2259322/93‑1 (MQ=255)
                                                                           gagaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGCCCAAACTTCAGTTCGCTGAGTTTGCCt               >  1:7511911/1‑93 (MQ=255)
                                                                           gagaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCt               >  2:2103360/1‑93 (MQ=255)
                                                                           gagaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCt               <  1:2430461/93‑1 (MQ=255)
                                                                           gagaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCt               >  1:5515051/1‑93 (MQ=255)
                                                                            agaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTg              <  1:3523598/93‑1 (MQ=255)
                                                                             gaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTgg             >  2:3269253/1‑93 (MQ=255)
                                                                             gaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTgg             >  1:1588086/1‑93 (MQ=255)
                                                                             gaAACGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTgg             >  1:6739312/1‑93 (MQ=255)
                                                                               aaCGCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCt           <  1:8747226/93‑1 (MQ=255)
                                                                                  gCCCCAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCAACGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTcgc        >  1:1176939/1‑93 (MQ=255)
                                                                                   ccccAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTcgcg       >  1:5912096/1‑93 (MQ=255)
                                                                                   ccccAGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTcgcg       >  2:5527766/1‑93 (MQ=255)
                                                                                       aGCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTa   >  1:898513/1‑93 (MQ=255)
                                                                                        gCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTAt  >  1:5749209/1‑93 (MQ=255)
                                                                                        gCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTAt  <  1:7635342/93‑1 (MQ=255)
                                                                                        gCACCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTAt  >  1:4473033/1‑93 (MQ=255)
                                                                                           |                                                                                         
AGCAACTGCTCTGCGCCAAACATCTCCGGCACTTCGGTCAGTACGGTAGTACCGCCGTTAGCAATCACGTAGTCAGAGAAACGCCCCAGCATCGGGTTAGCAGTAATACCAGAAAGACCGTCAGAACCACCGCACTCCAGACCAAACTTCAGTTCGCTGAGTTTGCCTGGCTCGCGTTTAT  >  NC_000913/3240032‑3240212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: