Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,580,138 A→G L215L (CTA→CTG yhhZ → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,580,1380AG99.7% 1070.7 / NA 303L215L (CTA→CTGyhhZhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (128/174);  total (128/175)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 306 total aligned reads displayed.

GGTGGCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTAAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAAATAAATAG  >  NC_000913/3580049‑3580227
                                                                                         |                                                                                         
ggtggCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAAt                                                                                        <  1:5766125/93‑1 (MQ=255)
ggtggCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAAt                                                                                        <  1:6162287/93‑1 (MQ=255)
 gtggCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATg                                                                                       <  1:7607294/93‑1 (MQ=255)
  tggCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGa                                                                                      <  2:3627187/93‑1 (MQ=255)
    gCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGaaa                                                                                    >  1:1616062/1‑93 (MQ=255)
      gTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGaaaaa                                                                                  >  1:4149407/1‑93 (MQ=255)
      gTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGaaaaa                                                                                  >  2:2539713/1‑93 (MQ=255)
      gTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGaaaaa                                                                                  >  1:4611743/1‑93 (MQ=255)
      gTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGaaaaa                                                                                  <  2:4438638/93‑1 (MQ=255)
      gTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGaaaaa                                                                                  <  2:400519/93‑1 (MQ=255)
       tataCAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGaaaaaa                                                                                 >  2:3297972/1‑93 (MQ=255)
         taCAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAAAAAAAGGCTATGATCAAATACTGAATGAAAAAACa                                                                               <  2:7585446/93‑1 (MQ=255)
          aCAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAg                                                                              >  1:8410171/1‑93 (MQ=255)
           cAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGc                                                                             >  2:6605864/1‑93 (MQ=255)
            aaTGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCg                                                                            <  2:4358354/93‑1 (MQ=255)
            aaTGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCg                                                                            >  2:198427/1‑93 (MQ=255)
             aTGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCgg                                                                           >  1:1854822/1‑93 (MQ=255)
             aTGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCgg                                                                           >  1:4069092/1‑93 (MQ=255)
                ggAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCa                                                                        >  2:5148015/1‑93 (MQ=255)
                ggAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCa                                                                        <  2:1897648/93‑1 (MQ=255)
                ggAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCa                                                                        >  1:2129070/1‑93 (MQ=255)
                 gAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCAt                                                                       <  1:1429699/93‑1 (MQ=255)
                  aaCATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATa                                                                      <  2:4642735/93‑1 (MQ=255)
                   aCATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAg                                                                     >  1:8693448/1‑93 (MQ=255)
                       tGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGAt                                                                 >  1:7382409/1‑93 (MQ=255)
                        gAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATa                                                                >  2:4746157/1‑93 (MQ=255)
                         aatgATTCAGAGATACTGCTGAAAAACTGGGTGTAGATGCAATAAAAGGCTATGATCAAATACTGAAAGAAAAAACAGCGGGCAGAGCGATAg                                                               <  2:2380891/90‑1 (MQ=255)
                         aaGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAg                                                               >  2:2696489/1‑93 (MQ=255)
                         aaGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAg                                                               <  1:1225449/93‑1 (MQ=255)
                          aGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGc                                                              >  2:1481627/1‑93 (MQ=255)
                            gATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCaa                                                            >  2:1284329/1‑93 (MQ=255)
                            gATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCaa                                                            <  1:5484520/93‑1 (MQ=255)
                             aTTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAAc                                                           >  2:728180/1‑93 (MQ=255)
                              ttCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACa                                                          <  2:276096/93‑1 (MQ=255)
                              ttCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACa                                                          <  2:6120353/93‑1 (MQ=255)
                                 agagATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGcg                                                       >  2:640163/1‑92 (MQ=255)
                                  gagaTACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCAt                                                      <  1:5656921/93‑1 (MQ=255)
                                   agaTACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATc                                                     >  1:916632/1‑93 (MQ=255)
                                   agaTACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATc                                                     <  1:4743655/93‑1 (MQ=255)
                                   agaTACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATc                                                     <  2:8638119/93‑1 (MQ=255)
                                    gaTACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCt                                                    <  2:2893774/93‑1 (MQ=255)
                                     aTACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTa                                                   >  1:3884637/1‑93 (MQ=255)
                                      tACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTAt                                                  >  1:5866207/1‑93 (MQ=255)
                                      tACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTAt                                                  <  1:3197488/93‑1 (MQ=255)
                                      tACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTAt                                                  <  2:8229937/93‑1 (MQ=255)
                                       aCTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTAtt                                                 <  2:554227/93‑1 (MQ=255)
                                       aCTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTAtt                                                 >  1:7971053/1‑93 (MQ=255)
                                            ggAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCtttt                                            >  2:2945470/1‑93 (MQ=255)
                                               aaaaCTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAAc                                         >  2:4623786/1‑93 (MQ=255)
                                               aaaaCTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAAc                                         <  1:1058492/93‑1 (MQ=255)
                                               aaaaCTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAAc                                         <  1:3257528/93‑1 (MQ=255)
                                                aaaCTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACa                                        <  1:4501077/93‑1 (MQ=255)
                                                  aCTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACaaa                                      >  2:8767931/1‑93 (MQ=255)
                                                  aCTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACaaa                                      >  1:8653635/1‑93 (MQ=255)
                                                  aCTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACaaa                                      <  2:6821900/93‑1 (MQ=255)
                                                   cTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAg                                     <  1:7266762/93‑1 (MQ=255)
                                                   cTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAg                                     >  1:4397815/1‑93 (MQ=255)
                                                   cTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAg                                     >  2:2988448/1‑93 (MQ=255)
                                                     gggTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCg                                   <  2:7382321/93‑1 (MQ=255)
                                                      ggTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGt                                  <  1:8783037/93‑1 (MQ=255)
                                                      ggTGGAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGt                                  <  1:5412459/93‑1 (MQ=255)
                                                        tGGAGATGCAATAAAAGGCTATGATCAAATACTAAATGAAAAAACAGCGGGCATAGCGATGGCAACAGCATCTATTCTTTTAGCAAAGCGTTc                                <  1:7818603/93‑1 (MQ=255)
                                                         ggAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCt                               >  1:2426277/1‑93 (MQ=255)
                                                         ggAGATGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCt                               <  2:6697113/93‑1 (MQ=255)
                                                           agaTGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTaa                             >  2:7759002/1‑93 (MQ=255)
                                                           agaTGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTaa                             <  1:3757855/93‑1 (MQ=255)
                                                            gaTGCAATAAAAGGCTGTGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAAt                            >  2:5792316/1‑93 (MQ=255)
                                                             aTGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATg                           >  1:6051574/1‑93 (MQ=255)
                                                              tGCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGt                          >  1:2879497/1‑93 (MQ=255)
                                                               gCAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGtt                         <  1:3053638/93‑1 (MQ=255)
                                                                cAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTg                        >  2:1646108/1‑93 (MQ=255)
                                                                cAATAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTg                        >  1:3088633/1‑93 (MQ=255)
                                                                 aaTAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGa                       >  1:1033523/1‑93 (MQ=255)
                                                                 aaTAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGa                       <  2:3772126/93‑1 (MQ=255)
                                                                   tAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATa                     <  2:5961665/93‑1 (MQ=255)
                                                                   tAAAAGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATa                     >  2:7881354/1‑93 (MQ=255)
                                                                    aaaaGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATAc                    >  2:4878435/1‑93 (MQ=255)
                                                                     aaaGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACa                   <  1:6406220/93‑1 (MQ=255)
                                                                      aaGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACat                  <  2:2282572/93‑1 (MQ=255)
                                                                       aGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACata                 >  2:6896729/1‑93 (MQ=255)
                                                                       aGGCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACata                 >  2:7177472/1‑93 (MQ=255)
                                                                        ggCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACatat                >  2:3094315/1‑93 (MQ=255)
                                                                        ggCTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGAATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACatat                >  1:2622573/1‑93 (MQ=255)
                                                                          cTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATAc              <  1:4556491/93‑1 (MQ=255)
                                                                          cTATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATAc              <  2:394054/93‑1 (MQ=255)
                                                                           tATGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACa             >  2:8530932/1‑93 (MQ=255)
                                                                             tGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGa           >  1:7061703/1‑93 (MQ=255)
                                                                             tGATCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGa           >  2:8361526/1‑93 (MQ=255)
                                                                                tCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGaaat        <  2:1140632/93‑1 (MQ=255)
                                                                                tCAAATACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGaaat        >  2:5344708/1‑93 (MQ=255)
                                                                                   aaTACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGaaataaa     <  1:4848436/93‑1 (MQ=255)
                                                                                    aTACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGaaataagt    <  2:6469241/93‑3 (MQ=255)
                                                                                    aTACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGaaataaat    <  1:51525/93‑1 (MQ=255)
                                                                                    aTACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGaaataaaa    >  2:2690787/1‑92 (MQ=255)
                                                                                     tACTGAATGAAAAAACAGCGTGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAaataaata   <  1:4933567/93‑1 (MQ=255)
                                                                                     tACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAaataaata   <  1:3489791/93‑1 (MQ=255)
                                                                                     tACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAaataaata   <  1:6561078/93‑1 (MQ=255)
                                                                                     tACTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTATTTTAACAAAGCGTTCTAATGTTGATACATATACAGAaataaata   <  2:8113413/93‑1 (MQ=255)
                                                                                      aCTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAAATAAATAg  <  1:6767342/93‑1 (MQ=255)
                                                                                      aCTGAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAAATAAATAg  <  1:5943177/93‑1 (MQ=255)
                                                                                         |                                                                                         
GGTGGCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTAAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAAATAAATAG  >  NC_000913/3580049‑3580227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: