BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,609,245	T→C	L54L (TTA→TTG)	yhhS ←	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,609,245	0	T	C	99.7%	1315.4 / ‑4.9	382	L54L (TTA→TTG)	yhhS	putative transport
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (168/212); total (168/214)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 393 total aligned reads displayed.

GCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTT  >  NC_000913/3609155‑3609334

  ggcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATa                                                                                       >  1:7483617/1‑93 (MQ=255)

  ggcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATa                                                                                       >  2:6959326/1‑93 (MQ=255)

  ggcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATa                                                                                       <  2:2985138/93‑1 (MQ=255)

   gcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATAc                                                                                      <  1:4785330/93‑1 (MQ=255)

   gcTCAGCAAGCTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATAc                                                                                      <  2:1039050/93‑1 (MQ=255)

    cTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACa                                                                                     <  1:4481489/93‑1 (MQ=255)

     tCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACag                                                                                    <  1:7717624/93‑1 (MQ=255)

      cAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGTCCGGCAATACagc                                                                                   <  2:4394653/93‑1 (MQ=255)

        gCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCACTACaccga                                                                                 >  2:7424724/1‑93 (MQ=255)

        gCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACagcga                                                                                 >  2:5356629/1‑93 (MQ=255)

         cAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACagcgag                                                                                <  2:8503242/93‑1 (MQ=255)

             gTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGc                                                                            <  1:7270999/93‑1 (MQ=255)

               ggCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCaa                                                                          <  1:1864195/93‑1 (MQ=255)

                gCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAAc                                                                         >  1:2788261/1‑93 (MQ=255)

                 cGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAAcc                                                                        <  2:1327312/93‑1 (MQ=255)

                   aaaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCg                                                                      <  1:4629611/93‑1 (MQ=255)

                   aaaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCg                                                                      <  2:727474/93‑1 (MQ=255)

                    aaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGa                                                                     >  2:448657/1‑93 (MQ=255)

                    aaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGa                                                                     >  2:637387/1‑93 (MQ=255)

                         tGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCTGCAATACAGCGAGCGGCAACCCGATGGTg                                                                <  2:1841609/93‑1 (MQ=255)

                          gCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGa                                                               >  1:3528403/1‑93 (MQ=255)

                           cAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAg                                                              <  2:5668754/93‑1 (MQ=255)

                             ggCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGTACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGTTGAGGt                                                            >  2:386843/1‑93 (MQ=255)

                             ggCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGt                                                            <  1:4112854/93‑1 (MQ=255)

                               cTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAg                                                          <  2:7714648/93‑1 (MQ=255)

                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATCACGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:1127104/1‑93 (MQ=255)

                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         <  1:2129113/93‑1 (MQ=255)

                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:3115464/1‑93 (MQ=255)

                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         <  2:3547364/93‑1 (MQ=255)

                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:6651012/1‑93 (MQ=255)

                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACAAAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:4850352/1‑93 (MQ=255)

                                 gATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCt                                                        <  2:5179419/93‑1 (MQ=255)

                                 gATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCt                                                        >  2:5023875/1‑93 (MQ=255)

                                 gATAACCAATCCTGCCCAGAAGGCGCTAAAGACCATCACATCATGGACATAGCCCGGCAATACAGCGAGCCGCAACCCGATGGTGAGGTAGCt                                                        >  2:234110/1‑93 (MQ=255)

                                    aaCCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTggg                                                     >  2:166420/1‑92 (MQ=255)

                                    aaCCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGc                                                     <  2:3355095/93‑1 (MQ=255)

                                     aCCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCg                                                    >  2:8321100/1‑93 (MQ=255)

                                       cAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGaa                                                  >  1:19135/1‑93 (MQ=255)

                                        aaTCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAg                                                 <  1:618525/93‑1 (MQ=255)

                                         aTCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGt                                                <  2:8696545/93‑1 (MQ=255)

                                          tCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGtt                                               >  1:1003468/1‑93 (MQ=255)

                                          tCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGtt                                               >  1:5486312/1‑93 (MQ=255)

                                          tCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGAAGCTGGCGAAGtt                                               >  2:4910710/1‑93 (MQ=255)

                                           ccTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTa                                              <  1:5847381/93‑1 (MQ=255)

                                            cTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTaa                                             <  1:3644948/93‑1 (MQ=255)

                                              gCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAAc                                           >  2:627581/1‑93 (MQ=255)

                                               cccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACa                                          <  1:370828/93‑1 (MQ=255)

                                               cccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACa                                          <  1:697332/93‑1 (MQ=255)

                                               cccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACa                                          <  2:8133286/93‑1 (MQ=255)

                                                ccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAt                                         <  1:8580197/93‑1 (MQ=255)

                                                 cAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATg                                        >  1:8631128/1‑93 (MQ=255)

                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       >  1:8205502/1‑93 (MQ=255)

                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       <  2:2573413/93‑1 (MQ=255)

                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       <  2:6809638/93‑1 (MQ=255)

                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       <  1:3295251/93‑1 (MQ=255)

                                                     aGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACta                                    >  2:1615648/1‑93 (MQ=255)

                                                      ggCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtat                                   >  1:5177547/1‑93 (MQ=255)

                                                      ggCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtat                                   >  2:3742268/1‑93 (MQ=255)

                                                      ggCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtat                                   >  1:7940676/1‑93 (MQ=255)

                                                       gcgcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtata                                  >  2:2009271/1‑93 (MQ=255)

                                                       gcgcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtata                                  <  2:1939840/93‑1 (MQ=255)

                                                       gcgcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtata                                  <  1:639806/93‑1 (MQ=255)

                                                         gcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATaga                                <  1:6011131/93‑1 (MQ=255)

                                                         gcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATaga                                >  1:4981332/1‑93 (MQ=255)

                                                         gcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATaga                                <  2:5740809/93‑1 (MQ=255)

                                                           tAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAgaga                              >  1:4213827/1‑93 (MQ=255)

                                                            aaaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGAc                             <  1:8349517/93‑1 (MQ=255)

                                                            aaaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGAc                             <  1:7125045/93‑1 (MQ=255)

                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            <  1:6822090/93‑1 (MQ=255)

                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            <  2:4119472/93‑1 (MQ=255)

                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            >  1:2973085/1‑93 (MQ=255)

                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            >  2:4712897/1‑93 (MQ=255)

                                                               gCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAAt                          >  2:6018822/1‑93 (MQ=255)

                                                                  catcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATgcg                       >  2:4081932/1‑93 (MQ=255)

                                                                  catcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATgcg                       >  1:7630846/1‑93 (MQ=255)

                                                                   atcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGAGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATgcgc                      >  2:2752790/1‑93 (MQ=255)

                                                                    tcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCa                     <  2:5512304/93‑1 (MQ=255)

                                                                     cacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCaa                    <  2:2155719/93‑1 (MQ=255)

                                                                       catcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAAt                  <  1:2600496/93‑1 (MQ=255)

                                                                        atcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAAtt                 <  2:2484302/93‑1 (MQ=255)

                                                                         tcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTc                >  2:1707512/1‑93 (MQ=255)

                                                                         tcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTAGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTc                >  2:8057835/1‑93 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  2:5464216/1‑93 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  1:510951/1‑93 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              <  2:6459827/93‑1 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  1:5753058/1‑93 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  1:1384285/1‑93 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              <  1:55651/93‑1 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              <  2:7958262/93‑1 (MQ=255)

                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCCGGCGAAGGTAAACAAGACTATAGAGACAAAGCGCAAAATCAg              >  2:7815893/1‑93 (MQ=255)

                                                                            tGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAgg             >  1:8772374/1‑93 (MQ=255)

                                                                             ggACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGgc            <  2:6488166/93‑1 (MQ=255)

                                                                             ggACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGgc            <  1:1583418/93‑1 (MQ=255)

                                                                                  tAGCGCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAAt       <  1:3019709/93‑1 (MQ=255)

                                                                                  tAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAAt       <  2:2891222/93‑1 (MQ=255)

                                                                                   aGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATc      >  1:6582830/1‑93 (MQ=255)

                                                                                    gCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATcc     >  1:1294781/1‑93 (MQ=255)

                                                                                    gCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATcc     >  1:1746217/1‑93 (MQ=255)

                                                                                    gCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATcc     >  1:2303978/1‑93 (MQ=255)

                                                                                     cccGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCg    <  2:924303/93‑1 (MQ=255)

GCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTT  >  NC_000913/3609155‑3609334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`