Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,624,949 C→T E724K (GAA→AAA)  yhiH ← putative ATP‑binding component of a transport system, fragment 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,624,9490CT99.4% 1254.5 / ‑3.9 354E724K (GAA→AAA) yhiHputative ATP‑binding component of a transport system, fragment 1
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base T (151/201);  total (152/202)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01

Only 100 of 373 total aligned reads displayed.

GCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTA  >  NC_000913/3624859‑3625038
                                                                                          |                                                                                         
gcgcGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTtcc                                                                                         >  1:6696093/1‑93 (MQ=255)
gcgcGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTtcc                                                                                         <  2:6493886/93‑1 (MQ=255)
 cgcgATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCg                                                                                        >  2:6299852/1‑93 (MQ=255)
  gcgATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGCATGATAATCGACCCAAGCTCTTTTTTCCGc                                                                                       >  1:3448056/1‑93 (MQ=255)
    gATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcac                                                                                     <  2:5095958/93‑1 (MQ=255)
    gATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcac                                                                                     >  1:2916354/1‑93 (MQ=255)
     aTGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacc                                                                                    >  1:4378005/1‑93 (MQ=255)
     aTGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacc                                                                                    <  1:5493530/93‑1 (MQ=255)
      tGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacca                                                                                   <  1:5346254/93‑1 (MQ=255)
       gTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcaccac                                                                                  <  2:3651191/93‑1 (MQ=255)
        tATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACg                                                                                 >  1:4496332/1‑93 (MQ=255)
         aTGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGc                                                                                <  1:4250707/93‑1 (MQ=255)
           ggCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTa                                                                              >  1:5395668/1‑93 (MQ=255)
            gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTaa                                                                             <  1:7409093/93‑1 (MQ=255)
            gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTaa                                                                             <  2:4807567/93‑1 (MQ=255)
             cAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAg                                                                            <  1:8218625/93‑1 (MQ=255)
             cAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAg                                                                            <  1:8426106/93‑1 (MQ=255)
              aaCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAgg                                                                           <  2:7051164/93‑1 (MQ=255)
               aCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAggg                                                                          >  1:5735539/1‑93 (MQ=255)
               aCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAggg                                                                          <  2:8159407/93‑1 (MQ=255)
                cTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgc                                                                         >  1:7648246/1‑93 (MQ=255)
                cTGTGTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAAACGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgc                                                                         <  1:3291896/93‑1 (MQ=255)
                 tGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGNTCTTTTTTCCGCACCACGCTAAGGgcg                                                                        >  2:4556134/1‑93 (MQ=255)
                 tGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgcg                                                                        >  2:6107340/1‑93 (MQ=255)
                  gTTTACCAAGCAAAAATTCACTACGCGTGGGGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgcgc                                                                       >  2:1385050/1‑93 (MQ=255)
                   tttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCt                                                                      <  2:6248768/93‑1 (MQ=255)
                    ttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCtt                                                                     >  1:7695568/1‑93 (MQ=255)
                     tACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTa                                                                    <  1:5661811/93‑1 (MQ=255)
                     tACCAAGAAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTa                                                                    <  2:2618404/93‑1 (MQ=255)
                      aCCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAg                                                                   <  2:2284341/93‑1 (MQ=255)
                      aCCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAg                                                                   >  2:8062186/1‑93 (MQ=255)
                       ccAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGc                                                                  <  1:801943/93‑1 (MQ=255)
                        cAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCa                                                                 <  1:4559581/93‑1 (MQ=255)
                         aaGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCAt                                                                >  1:5032503/1‑93 (MQ=255)
                         aaGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCAt                                                                >  1:7282331/1‑93 (MQ=255)
                           gCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCAtta                                                              >  1:8809544/1‑92 (MQ=255)
                           gCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTg                                                              >  2:5506951/1‑93 (MQ=255)
                            cAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGa                                                             <  2:4716449/93‑1 (MQ=255)
                             aaaaaTTCACTACGCGTGGCGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAc                                                            >  2:7750262/1‑93 (MQ=255)
                              aaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACg                                                           <  2:3162656/93‑1 (MQ=255)
                              aaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACg                                                           >  1:1394842/1‑93 (MQ=255)
                              aaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACg                                                           >  2:1622531/1‑93 (MQ=255)
                               aaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACgg                                                          <  1:1027394/93‑1 (MQ=255)
                                aaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACggg                                                         >  1:2851386/1‑93 (MQ=255)
                                 aTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGa                                                        <  2:4383280/93‑1 (MQ=255)
                                    cACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatca                                                     <  1:1861503/93‑1 (MQ=255)
                                     aCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcat                                                    >  1:1477199/1‑93 (MQ=255)
                                      cTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcatc                                                   <  1:8515445/93‑1 (MQ=255)
                                      cTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcatc                                                   <  2:5784421/93‑1 (MQ=255)
                                       tACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACCCTAAGGGCGCTTAGCATTGACGGGatcatca                                                  >  2:8425805/1‑93 (MQ=255)
                                        aCGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcatcat                                                 >  2:5926470/1‑93 (MQ=255)
                                         cgcgTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcatcatc                                                >  2:3083174/1‑93 (MQ=255)
                                          gcgTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGAtcatcatca                                               >  1:412023/1‑93 (MQ=255)
                                               gtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGa                                          >  1:5602861/1‑93 (MQ=255)
                                                 gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAg                                        <  1:7858828/93‑1 (MQ=255)
                                                 gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAg                                        <  1:2397560/93‑1 (MQ=255)
                                                 gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAg                                        <  2:1762977/93‑1 (MQ=255)
                                                    ggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCGGCACCCCGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAAAAGAgg                                     >  1:6769383/1‑93 (MQ=255)
                                                     gTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCggg                                    <  1:861971/93‑1 (MQ=255)
                                                        aCGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATc                                 <  2:104171/93‑1 (MQ=255)
                                                        aCGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATc                                 <  1:259460/93‑1 (MQ=255)
                                                        aCGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATc                                 <  2:7204644/93‑1 (MQ=255)
                                                         cGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCa                                <  2:7522197/93‑1 (MQ=255)
                                                          gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAc                               <  1:1635381/93‑1 (MQ=255)
                                                           tAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAcc                              >  2:4129652/1‑93 (MQ=255)
                                                           tAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAcc                              >  2:6606830/1‑93 (MQ=255)
                                                           tAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAcc                              >  1:5145221/1‑93 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc                            <  2:3449490/93‑1 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc                            <  2:528472/93‑1 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc                            >  2:2481351/1‑93 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTATTCCGCACCACGCTAAGGGCGCTTAGTATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc                            <  2:5677880/93‑1 (MQ=255)
                                                               ggTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgccg                          >  1:2223934/1‑93 (MQ=255)
                                                                     tAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACaa                    >  2:2762279/1‑93 (MQ=255)
                                                                      aaTCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAAt                   <  1:8103371/93‑1 (MQ=255)
                                                                      aaTCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAAt                   <  2:3906230/93‑1 (MQ=255)
                                                                       aTCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATc                  <  2:4187884/93‑1 (MQ=255)
                                                                          gACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCt               <  1:6440295/93‑1 (MQ=255)
                                                                           aCCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTg              <  1:4382457/93‑1 (MQ=255)
                                                                             ccAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGc            <  1:2650633/93‑1 (MQ=255)
                                                                             ccAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGc            >  1:2361864/1‑93 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa           <  1:3704184/93‑1 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa           >  2:7134085/1‑93 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa           >  2:8199909/1‑93 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa           <  1:3831473/93‑1 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATAATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa           <  1:1182541/93‑1 (MQ=255)
                                                                               aaGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCTTTGACGGGATCATCATCAGCAGAAGCGGGATAACGGCCGGAAAACTCGCTGCCAg          >  2:87882/1‑93 (MQ=255)
                                                                               aaGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAg          >  1:4698672/1‑93 (MQ=255)
                                                                               aaGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAg          <  1:2168039/93‑1 (MQ=255)
                                                                                aGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAgg         >  1:5909903/1‑93 (MQ=255)
                                                                                aGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAgg         >  1:2249240/1‑93 (MQ=255)
                                                                                aGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAgg         >  1:1411420/1‑93 (MQ=255)
                                                                                 gCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGc        >  1:6972872/1‑93 (MQ=255)
                                                                                  ctctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCt       <  2:2119923/93‑1 (MQ=255)
                                                                                  ctctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCt       <  1:618274/93‑1 (MQ=255)
                                                                                  ctctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCt       <  1:3034659/93‑1 (MQ=255)
                                                                                  ctctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCt       >  1:2447291/1‑93 (MQ=255)
                                                                                   tctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCACTGGCAGGCtt      >  2:6796755/1‑93 (MQ=255)
                                                                                     ttttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCtttt    >  1:4668938/1‑93 (MQ=255)
                                                                                     ttttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCtttt    >  1:4014192/1‑93 (MQ=255)
                                                                                      ttttTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCttttt   >  2:5219275/1‑93 (MQ=255)
                                                                                          |                                                                                         
GCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTA  >  NC_000913/3624859‑3625038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: