Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,866,583 A→G S119S (AGT→AGC yidR ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,866,5830AG99.7% 1187.9 / NA 344S119S (AGT→AGCyidRhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (178/164);  minor base C (1/0);  total (180/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 357 total aligned reads displayed.

TTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAA  >  NC_000913/3866493‑3866672
                                                                                          |                                                                                         
ttCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCt                                                                                         >  1:4713824/1‑93 (MQ=255)
 tCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTc                                                                                        <  1:2484268/93‑1 (MQ=255)
 tCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTc                                                                                        >  2:2274424/1‑93 (MQ=255)
 tCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTc                                                                                        >  1:5170625/1‑93 (MQ=255)
  cACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCa                                                                                       >  2:1721580/1‑93 (MQ=255)
   aCCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCAt                                                                                      >  2:3147844/1‑93 (MQ=255)
     cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCt                                                                                    >  2:2553915/1‑93 (MQ=255)
     cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCt                                                                                    <  1:4977597/93‑1 (MQ=255)
     cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCt                                                                                    <  2:8442134/93‑1 (MQ=255)
      gTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCtt                                                                                   >  1:8341565/1‑93 (MQ=255)
      gTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCtt                                                                                   <  1:6048402/93‑1 (MQ=255)
       ttCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGAGGTAATATCCATCGCATCAAGGTTGCTCATCTTg                                                                                  >  2:7313726/1‑93 (MQ=255)
        tCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTgc                                                                                 <  2:6548896/93‑1 (MQ=255)
        tCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTgc                                                                                 >  1:3494444/1‑93 (MQ=255)
         cGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTgcc                                                                                <  1:1990695/93‑1 (MQ=255)
             cTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCt                                                                            <  1:730080/93‑1 (MQ=255)
                     aTGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAAt                                                                    <  2:5256920/93‑1 (MQ=255)
                       gCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCa                                                                  <  2:6725248/93‑1 (MQ=255)
                       gCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCa                                                                  >  1:7999586/1‑93 (MQ=255)
                       gCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCa                                                                  <  2:1469408/93‑1 (MQ=255)
                        cacaTGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATGTTGCCGCCTTCAACAATCAc                                                                 <  1:5685892/93‑1 (MQ=255)
                         acaTGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACt                                                                >  2:4848190/1‑93 (MQ=255)
                          caTGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTc                                                               <  2:419754/93‑1 (MQ=255)
                          caTGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTc                                                               <  2:7958282/93‑1 (MQ=255)
                          caTGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTc                                                               <  2:2756162/93‑1 (MQ=255)
                           attgCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCATGGTTTCTCATCTTGCCGCCTTCAATAATCATTcc                                                              >  2:8043304/4‑93 (MQ=255)
                           aTGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTcc                                                              <  1:2379033/93‑1 (MQ=255)
                            tGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCcg                                                             >  2:4353298/1‑93 (MQ=255)
                            tGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCcg                                                             <  1:3936201/93‑1 (MQ=255)
                            tGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCcg                                                             <  2:3537732/93‑1 (MQ=255)
                             ggCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCcgc                                                            >  2:64826/1‑93 (MQ=255)
                             ggCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCcgc                                                            <  1:2945062/93‑1 (MQ=255)
                             ggCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTCCTCATCTTGCCGCCTTCAACAATCACTAcgc                                                            >  1:7608326/1‑93 (MQ=255)
                                tGCCGCCGCGCCGCACTCCTGGCGTATACGGCGCGGTAATAACCATCGCATCAAGATTGCTCATCTTGCCGCCTTAAACACTCAAACCgcgca                                                         <  2:7791153/93‑2 (MQ=255)
                                 gccgccGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCg                                                        >  1:2833530/1‑93 (MQ=255)
                                 gccgccGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCg                                                        >  1:1636142/1‑93 (MQ=255)
                                 gccgccGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCg                                                        >  2:321681/1‑93 (MQ=255)
                                 gccgccGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCg                                                        >  2:6427909/1‑93 (MQ=255)
                                 gccgccGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCg                                                        <  1:4391963/93‑1 (MQ=255)
                                     ccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatgt                                                    >  2:5641800/1‑92 (MQ=255)
                                      cgcgCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatgat                                                   <  2:1583657/93‑1 (MQ=255)
                                       gcgcAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGatgatg                                                  >  2:8716271/1‑93 (MQ=255)
                                       gcgcAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGatgatg                                                  >  2:2877969/1‑93 (MQ=255)
                                        cgcAGCACTCCTGGCGTATGCGGTGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATgg                                                 <  2:4273737/93‑1 (MQ=255)
                                        cgcAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATgg                                                 <  2:4063027/93‑1 (MQ=255)
                                         gcagcaCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGa                                                <  1:8709145/93‑1 (MQ=255)
                                         gcagcaCTCCTGGCGTATAAGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGa                                                >  1:867236/1‑93 (MQ=255)
                                          cagcaCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTGATCTTGCCGCCTTCAACCATCACTCCGCGCCCTGGATGGaa                                               >  2:6856037/1‑93 (MQ=255)
                                           agcaCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAg                                              <  1:3046375/93‑1 (MQ=255)
                                             caCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTc                                            <  2:2152652/93‑1 (MQ=255)
                                              aCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCg                                           >  1:7017680/1‑93 (MQ=255)
                                                tCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTa                                         >  2:5573821/1‑93 (MQ=255)
                                                  cTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAAt                                       <  2:193591/93‑1 (MQ=255)
                                                  cTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAAt                                       >  1:364812/1‑93 (MQ=255)
                                                   tGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATg                                      >  1:1049916/1‑93 (MQ=255)
                                                   tGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATg                                      >  1:926832/1‑93 (MQ=255)
                                                    ggCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGc                                     <  1:7504116/93‑1 (MQ=255)
                                                     gCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGcc                                    <  2:615190/93‑1 (MQ=255)
                                                      cGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCa                                   <  2:5219502/93‑1 (MQ=255)
                                                       gTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCAt                                  >  2:947821/1‑93 (MQ=255)
                                                        tataCGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATg                                 >  1:4112722/1‑93 (MQ=255)
                                                             ggCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtca                            <  1:1598552/93‑1 (MQ=255)
                                                              gcgcGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcat                           >  1:6937253/1‑93 (MQ=255)
                                                                gcgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcatca                         >  2:4617163/1‑93 (MQ=255)
                                                                gcgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcatca                         <  1:1386941/93‑1 (MQ=255)
                                                                gcgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcatca                         >  2:1250885/1‑93 (MQ=255)
                                                                gcgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcatca                         <  1:3285687/93‑1 (MQ=255)
                                                                 cgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAg                        <  1:2592156/93‑1 (MQ=255)
                                                                 cgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAg                        <  2:5489948/93‑1 (MQ=255)
                                                                  ggTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAgg                       >  1:2774825/1‑93 (MQ=255)
                                                                  ggTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAgg                       >  2:8266857/1‑93 (MQ=255)
                                                                  ggTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAgg                       <  1:6705073/93‑1 (MQ=255)
                                                                   gTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGa                      >  2:5866725/1‑93 (MQ=255)
                                                                   gTAATATCCATCGCATCAAGGGTGCTCATCTTGCCGCCTTCAACAATCGCTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGa                      <  1:4793468/93‑1 (MQ=255)
                                                                   gTAATAGCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGa                      <  1:889717/93‑1 (MQ=255)
                                                                    tAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAt                     <  2:2718998/93‑1 (MQ=255)
                                                                      atatCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCCCTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAttt                   <  2:2452986/93‑1 (MQ=255)
                                                                      atatCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAttt                   >  1:182002/1‑93 (MQ=255)
                                                                      atatCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAttt                   >  1:45828/1‑93 (MQ=255)
                                                                       tatCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAtttt                  <  1:8442386/93‑1 (MQ=255)
                                                                        atCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTc                 <  1:7807298/93‑1 (MQ=255)
                                                                         tCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTcc                >  1:6459525/1‑93 (MQ=255)
                                                                         tCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTcc                >  1:590896/1‑93 (MQ=255)
                                                                         tCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTcc                >  1:5522706/1‑93 (MQ=255)
                                                                           cATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCGCTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCgg              <  1:4412959/93‑1 (MQ=255)
                                                                              cGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGcc           <  1:8551926/93‑1 (MQ=255)
                                                                               gCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCg          <  2:3579549/93‑1 (MQ=255)
                                                                               gCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCg          <  1:424191/93‑1 (MQ=255)
                                                                               gCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGACg          >  1:4523806/1‑93 (MQ=255)
                                                                               gCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGCCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCg          >  2:1016577/1‑93 (MQ=255)
                                                                                cATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGt         >  2:8181526/1‑93 (MQ=255)
                                                                                 aTCAAGTTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTg        <  2:3345553/93‑1 (MQ=255)
                                                                                 aTCAAGTTTGCTCATCTTGCCCCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTg        <  1:6246856/93‑1 (MQ=255)
                                                                                 aTCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTg        >  1:7092122/1‑93 (MQ=255)
                                                                                   cAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGa      >  2:7078376/1‑93 (MQ=255)
                                                                                   cAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGa      <  1:5347992/93‑1 (MQ=255)
                                                                                   cAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGa      <  1:8192944/93‑1 (MQ=255)
                                                                                     aGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATg    <  1:6863332/93‑1 (MQ=255)
                                                                                      ggTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGa   <  2:3937164/93‑1 (MQ=255)
                                                                                       gTTTCTCATCTTGCCGCTTTCAACAATCGCTCCGCGCCTATGATGCAAGTCCTAAGGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGaa  <  2:3694224/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAA  >  NC_000913/3866493‑3866672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: