Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,109,226 A→G L190P (CTA→CCA)  yiiQ ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,109,2260AG99.7% 1164.6 / ‑6.0 336L190P (CTA→CCA) yiiQhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (187/148);  total (188/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 341 total aligned reads displayed.

AGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTG  >  NC_000913/4109136‑4109315
                                                                                          |                                                                                         
  ggCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGgcgc                                                                                       <  2:6717737/93‑1 (MQ=255)
   gcagcaGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGcc                                                                                      >  1:2738898/1‑93 (MQ=255)
     agcagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAg                                                                                    <  2:5959463/93‑1 (MQ=255)
     agcagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAg                                                                                    >  1:4004823/1‑93 (MQ=255)
      gcagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGc                                                                                   >  1:293429/1‑93 (MQ=255)
       cagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCt                                                                                  <  2:5818855/93‑1 (MQ=255)
       cagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCt                                                                                  <  2:2031239/93‑1 (MQ=255)
        agGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCtt                                                                                 >  2:3356641/1‑93 (MQ=255)
         ggTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTa                                                                                >  1:7706793/1‑93 (MQ=255)
         ggTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTa                                                                                >  2:2988317/1‑93 (MQ=255)
         ggTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTa                                                                                >  2:1798098/1‑93 (MQ=255)
          gTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTaa                                                                               <  2:5354870/93‑1 (MQ=255)
           tCTGTGGAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAAt                                                                              >  1:7502668/1‑93 (MQ=255)
           tCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAAt                                                                              >  2:2849644/1‑93 (MQ=255)
           gcTGTGTAACAGTATAGAGATTCAACGGCACAAAGGCTTCGCTTTTTGTCATTTATTTAATTCTTCAAGCGATTCAGATGGCGCCAGCTTatt                                                                              >  2:7808120/2‑91 (MQ=255)
            cTGTGAAACAGTATAGAGATTCATCGGCCCGAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATc                                                                             <  1:3030082/93‑1 (MQ=255)
             tgtgAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCg                                                                            >  1:1018270/1‑93 (MQ=255)
                gAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGtt                                                                         <  2:6262201/93‑1 (MQ=255)
                 aaaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTc                                                                        <  2:440087/93‑1 (MQ=255)
                 aaaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTc                                                                        <  1:651386/93‑1 (MQ=255)
                 aaaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTCCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTc                                                                        <  1:3535541/93‑1 (MQ=255)
                  aaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCa                                                                       >  2:8452078/1‑93 (MQ=255)
                     aGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACa                                                                    <  2:4015015/93‑1 (MQ=255)
                      gTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAg                                                                   >  2:1517193/1‑93 (MQ=255)
                       tataGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGc                                                                  <  2:5067234/93‑1 (MQ=255)
                        ataGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCg                                                                 >  1:4930410/1‑93 (MQ=255)
                          agagATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGaa                                                               <  1:1344219/93‑1 (MQ=255)
                           gagaTTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAg                                                              >  1:2521166/1‑93 (MQ=255)
                            agaTTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAgg                                                             <  1:6400352/93‑1 (MQ=255)
                               ttCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCa                                                          <  2:1939010/93‑1 (MQ=255)
                                tCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAg                                                         <  1:5410578/93‑1 (MQ=255)
                                  aTCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGcc                                                       <  2:4305795/93‑1 (MQ=255)
                                   tCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGccc                                                      >  2:1288626/1‑93 (MQ=255)
                                     ggCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCt                                                    >  2:7313013/1‑93 (MQ=255)
                                      gCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCtt                                                   <  2:5590687/93‑1 (MQ=255)
                                       cacaAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTAAACAGCGAAGGTCAGCCCCttt                                                  >  1:7120900/1‑93 (MQ=255)
                                         caAAGGCTTTGCTTTTTGTCATTTATTCAAGCCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTc                                                <  2:3974724/93‑1 (MQ=255)
                                         caAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTc                                                >  1:7015391/1‑93 (MQ=255)
                                         caAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTc                                                >  2:6458604/1‑93 (MQ=255)
                                          aaaGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCg                                               >  1:1197288/1‑93 (MQ=255)
                                          aaaGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCg                                               >  2:5770717/1‑93 (MQ=255)
                                           aaGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGc                                              >  2:7412135/1‑93 (MQ=255)
                                           aaGGCGTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGc                                              <  2:8378134/93‑1 (MQ=255)
                                            aGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGcc                                             >  2:6082846/1‑93 (MQ=255)
                                             ggCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCg                                            >  2:8536434/1‑93 (MQ=255)
                                             ggCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCg                                            >  2:6145660/1‑93 (MQ=255)
                                              gctttgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGt                                           <  1:5291942/93‑1 (MQ=255)
                                               ctttgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGtt                                          <  2:3857979/93‑1 (MQ=255)
                                                tttgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTg                                         >  1:6038798/1‑93 (MQ=255)
                                                  tgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTc                                       <  2:4793344/93‑1 (MQ=255)
                                                  tgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTc                                       >  1:5152983/1‑93 (MQ=255)
                                                    ctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcg                                     <  2:92863/93‑1 (MQ=255)
                                                    ctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcg                                     <  1:3418324/93‑1 (MQ=255)
                                                    ctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcg                                     <  1:4975260/93‑1 (MQ=255)
                                                     tttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgc                                    >  1:8460934/1‑93 (MQ=255)
                                                     tttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgc                                    <  1:7414635/93‑1 (MQ=255)
                                                      ttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgcg                                   >  2:3513153/1‑93 (MQ=255)
                                                      ttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgcg                                   >  1:8140889/1‑93 (MQ=255)
                                                       tttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGa                                  >  1:7907831/1‑93 (MQ=255)
                                                       tttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGa                                  <  2:2526809/93‑1 (MQ=255)
                                                       tttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGa                                  >  2:3024959/1‑93 (MQ=255)
                                                        ttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGac                                 >  2:600803/1‑93 (MQ=255)
                                                        ttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGac                                 >  2:4337772/1‑93 (MQ=255)
                                                        ttGTAATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCACCAGCGCAGGTCAGCCCCTTTTAGCCGTTGTCCGCGac                                 >  2:2390322/1‑93 (MQ=255)
                                                         tGTCATTTATTCAAACCTTAAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGaca                                >  1:6233765/1‑93 (MQ=255)
                                                          gTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaa                               <  2:6863848/93‑1 (MQ=255)
                                                           tCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaac                              <  1:795294/93‑1 (MQ=255)
                                                            cATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaaca                             <  2:7211138/93‑1 (MQ=255)
                                                            cATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaaca                             >  1:3839958/1‑93 (MQ=255)
                                                              tttATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATa                           >  1:6704226/1‑93 (MQ=255)
                                                                tATTCAATCCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAAc                         <  2:3712585/93‑1 (MQ=255)
                                                                tATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAAc                         >  1:7169501/1‑93 (MQ=255)
                                                                 aTTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACg                        >  1:185750/1‑93 (MQ=255)
                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACga                       >  1:7662552/1‑92 (MQ=255)
                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       >  2:1171793/1‑93 (MQ=255)
                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       >  1:5977832/1‑93 (MQ=255)
                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       <  1:4878710/93‑1 (MQ=255)
                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       <  1:1512283/93‑1 (MQ=255)
                                                                   tCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCa                      <  2:8691058/93‑1 (MQ=255)
                                                                    cAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAg                     <  1:6145756/93‑1 (MQ=255)
                                                                       aCCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGc                  >  2:1250721/1‑93 (MQ=255)
                                                                        ccTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTTCa                 >  1:1277242/1‑93 (MQ=255)
                                                                        ccTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCa                 >  1:4344976/1‑93 (MQ=255)
                                                                          ttCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCAcc               >  1:2903907/1‑93 (MQ=255)
                                                                          ttCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCAcc               >  1:8766228/1‑93 (MQ=255)
                                                                          ttCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCAcc               <  2:7648110/93‑1 (MQ=255)
                                                                           tCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCt              <  1:1131853/93‑1 (MQ=255)
                                                                           tCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCt              >  1:3784713/1‑93 (MQ=255)
                                                                              aGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCt           >  2:1674441/1‑93 (MQ=255)
                                                                              aGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCt           >  2:8189901/1‑93 (MQ=255)
                                                                               gCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTg          >  1:3611420/1‑93 (MQ=255)
                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         <  1:4138379/93‑1 (MQ=255)
                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         >  1:6786646/1‑93 (MQ=255)
                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         >  2:1426595/1‑93 (MQ=255)
                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         <  2:2276255/93‑1 (MQ=255)
                                                                                 gATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGtc        >  1:5788183/1‑93 (MQ=255)
                                                                                 gATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGtc        <  1:3896730/93‑1 (MQ=255)
                                                                                 gATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGtc        >  2:8049232/1‑93 (MQ=255)
                                                                                      aGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGgt   <  2:1649928/93‑1 (MQ=255)
                                                                                       gATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGgtg  >  1:6851063/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTG  >  NC_000913/4109136‑4109315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: