Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 528,763 T→C intergenic (+409/+106) b0501 → / ← b0502 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913528,7630TC99.4% 1109.7 / ‑4.9 328intergenic (+409/+106)b0501/b0502hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (159/167);  total (160/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01

Only 100 of 340 total aligned reads displayed.

TTCCGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGTACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGTC  >  NC_000913/528673‑528852
                                                                                          |                                                                                         
 tCCGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcg                                                                                        <  2:5275417/93‑1 (MQ=255)
  ccGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcgg                                                                                       <  1:4281792/93‑1 (MQ=255)
   cGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcggc                                                                                      <  2:8064386/93‑1 (MQ=255)
   cGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcggc                                                                                      >  1:2631556/1‑93 (MQ=255)
     gATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcggcgg                                                                                    >  1:4727931/1‑93 (MQ=255)
     gATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcggcgg                                                                                    >  1:8112755/1‑93 (MQ=255)
       ttAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGcc                                                                                  <  2:8072964/93‑1 (MQ=255)
       ttAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGcc                                                                                  >  1:6488814/1‑93 (MQ=255)
       ttAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGcc                                                                                  >  1:4178347/1‑93 (MQ=255)
        tAAAATAAATTCTTGTCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGccc                                                                                 <  1:8408814/93‑1 (MQ=255)
        tAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGccc                                                                                 <  2:6526448/93‑1 (MQ=255)
         aaaaTAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCg                                                                                >  2:3489969/1‑93 (MQ=255)
             taaatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCATGGCGGCCCGATAg                                                                            >  1:5108452/1‑93 (MQ=255)
             taaatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAg                                                                            >  1:7290832/1‑93 (MQ=255)
               aatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTc                                                                          <  1:2101903/93‑1 (MQ=255)
                atTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTcc                                                                         >  1:5669230/1‑93 (MQ=255)
                 ttCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCa                                                                        >  2:4605326/1‑93 (MQ=255)
                  tCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAg                                                                       <  1:365417/93‑1 (MQ=255)
                  tCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAg                                                                       <  2:7196015/93‑1 (MQ=255)
                   cTTGCCGGGAAAGAAAGAGGAAATAACCCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAgg                                                                      <  1:5855132/93‑1 (MQ=255)
                   cTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAgg                                                                      <  1:994757/93‑1 (MQ=255)
                    ttGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAggg                                                                     <  2:8810235/93‑1 (MQ=255)
                    ttGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAggg                                                                     <  2:1456232/93‑1 (MQ=255)
                    ttGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAggg                                                                     <  2:760344/93‑1 (MQ=255)
                      gCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGtt                                                                   >  2:290985/1‑93 (MQ=255)
                      gCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGtt                                                                   <  2:3562925/93‑1 (MQ=255)
                      gCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGtt                                                                   <  2:8186225/93‑1 (MQ=255)
                       ccGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTc                                                                  >  2:3439330/1‑93 (MQ=255)
                       ccGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTc                                                                  <  2:1331715/93‑1 (MQ=255)
                       ccGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTc                                                                  <  1:4655975/93‑1 (MQ=255)
                        cGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCa                                                                 <  2:6338686/93‑1 (MQ=255)
                        cGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCa                                                                 >  2:6943350/1‑93 (MQ=255)
                         gggAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAg                                                                >  1:1742650/1‑93 (MQ=255)
                         gggAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAg                                                                >  2:494810/1‑93 (MQ=255)
                          ggAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGc                                                               <  1:2872224/93‑1 (MQ=255)
                          ggAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGGTCAGc                                                               >  2:3097892/1‑93 (MQ=255)
                          ggAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTAACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGc                                                               <  1:2404599/93‑1 (MQ=255)
                           gaaagaaaGAGGAAATAAACCATGAGCGGAAACCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCg                                                              <  1:2213238/93‑1 (MQ=255)
                            aaagaaagAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgg                                                             <  2:6834897/93‑1 (MQ=255)
                            aaagaaagAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgg                                                             <  2:3333717/93‑1 (MQ=255)
                             aagaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggg                                                            >  2:2357/1‑93 (MQ=255)
                             aagaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggg                                                            >  2:109759/1‑93 (MQ=255)
                              agaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggg                                                           >  2:4373051/1‑93 (MQ=255)
                              agaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggg                                                           >  1:2549643/1‑93 (MQ=255)
                              agaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggg                                                           >  1:5211200/1‑93 (MQ=255)
                              agaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggg                                                           <  2:7937978/93‑1 (MQ=255)
                               gaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggggg                                                          >  1:940858/1‑93 (MQ=255)
                               gaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggggg                                                          >  2:775227/1‑93 (MQ=255)
                                aaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggggg                                                         >  2:5212490/1‑92 (MQ=255)
                                 aagtGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggggca                                                        >  2:3745452/1‑91 (MQ=255)
                                 aagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTa                                                        <  2:1720308/93‑1 (MQ=255)
                                  agagGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGggggggcat                                                       >  2:7393921/1‑90 (MQ=255)
                                   aagGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACt                                                      <  1:4851144/92‑1 (MQ=255)
                                        aaTAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAg                                                 <  1:8184739/93‑1 (MQ=255)
                                        aaTAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAg                                                 <  1:1375724/93‑1 (MQ=255)
                                         aTAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGt                                                <  1:6207371/93‑1 (MQ=255)
                                          caaaCCATTAGCGGAAAACCAGCGGCACGCGAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTc                                               <  1:8696387/92‑1 (MQ=255)
                                            aaCCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTcgc                                             >  2:5076447/1‑93 (MQ=255)
                                             aCCACTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCACAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTcgcg                                            <  1:850855/93‑1 (MQ=255)
                                              ccATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGGACTGATAGTCgcgc                                           >  1:6738480/1‑93 (MQ=255)
                                                atgaGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCg                                         <  1:3222423/90‑1 (MQ=255)
                                                aTTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGcca                                         >  2:7472055/1‑92 (MQ=255)
                                                 ttAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGa                                        >  1:3957917/1‑93 (MQ=255)
                                                 ttAGCGGAAAACCAGCGGCACGCCAGGGTGACATGACCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGa                                        >  2:5608005/1‑93 (MQ=255)
                                                   aGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACt                                      <  1:344408/93‑1 (MQ=255)
                                                   aGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACt                                      <  1:4513167/93‑1 (MQ=255)
                                                    gCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTg                                     >  1:3486897/1‑93 (MQ=255)
                                                      ggAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGGACTGATAGTCGGGCCGACTGCa                                   >  2:2594935/1‑93 (MQ=255)
                                                       gAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGGACTGATAGTCGCGCGCACTGGAt                                  >  1:3174828/1‑93 (MQ=255)
                                                       gAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGGTCAGCGGGGGTACTGATAGTCGCGCCGACTGCAt                                  >  2:833231/1‑93 (MQ=255)
                                                        aaaaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATc                                 <  2:3698288/93‑1 (MQ=255)
                                                        aaaaCCAGCGGCACGCCAGGGTCACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATc                                 <  1:5519901/93‑1 (MQ=255)
                                                         aaaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCg                                <  2:3856675/93‑1 (MQ=255)
                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCga                               >  2:2309408/1‑93 (MQ=255)
                                                             cAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGaa                            <  2:5760803/93‑1 (MQ=255)
                                                              aGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAAc                           <  2:2424837/93‑1 (MQ=255)
                                                              aGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAAc                           <  1:1053614/93‑1 (MQ=255)
                                                              aGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGCACTGATAGTTGCGCCGACTGCATCGAGAAc                           >  2:6685347/1‑93 (MQ=255)
                                                               gCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACt                          <  1:3515519/93‑1 (MQ=255)
                                                                  gCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGATTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCa                       <  2:4185354/93‑1 (MQ=255)
                                                                     cGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATAc                    >  2:2960036/1‑93 (MQ=255)
                                                                       ccAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACaa                  <  1:6104626/93‑1 (MQ=255)
                                                                       ccAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACaa                  >  1:6953949/1‑93 (MQ=255)
                                                                        cAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAAc                 <  1:7733281/93‑1 (MQ=255)
                                                                           ggTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACttt              >  1:7629957/1‑93 (MQ=255)
                                                                           ggTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGCACTGATAGTCGCGCCGACTGCATCGAGAAATCAATACAACttt              >  1:7467336/1‑93 (MQ=255)
                                                                            gTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACtttt             <  1:8817224/93‑1 (MQ=255)
                                                                              gACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTa           >  1:8036783/1‑93 (MQ=255)
                                                                               aCATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTAc          <  2:321073/93‑1 (MQ=255)
                                                                               aCATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTAc          >  2:2663880/1‑93 (MQ=255)
                                                                                cATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACg         <  1:7019500/93‑1 (MQ=255)
                                                                                 aTGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACgg        <  2:5952779/93‑1 (MQ=255)
                                                                                  tGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGa       >  2:5046360/1‑93 (MQ=255)
                                                                                  tGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGa       >  2:5784276/1‑93 (MQ=255)
                                                                                    ccccAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGTTAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAAc     <  2:4135410/93‑1 (MQ=255)
                                                                                    ccccAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAAc     >  2:2038587/1‑93 (MQ=255)
                                                                                    ccccAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAAc     >  1:3324727/1‑93 (MQ=255)
                                                                                     cccAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACg    <  1:1144498/93‑1 (MQ=255)
                                                                                       cAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGTc  <  2:1790592/93‑1 (MQ=255)
                                                                                       cAGCACGGCGGCCAGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGTc  <  1:4986480/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTCCGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGTACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGTC  >  NC_000913/528673‑528852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: