Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,413,828 A→G Y19H (TAT→CAT)  b4188 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,413,8280AG100.0% 1321.8 / NA 379Y19H (TAT→CAT) b4188hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (200/179);  total (200/179)

Only 100 of 385 total aligned reads displayed.

TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATC  >  NC_000913/4413738‑4413917
                                                                                          |                                                                                         
tGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCCGACTGTGCCGTGGCGCTCGCAGGATGAg                                                                                         <  2:1957078/93‑1 (MQ=255)
   tAATTGAGATCTGACCTTTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCa                                                                                      <  2:7614759/93‑1 (MQ=255)
      cTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTa                                                                                   >  1:6178655/1‑93 (MQ=255)
      cTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTa                                                                                   >  1:6524806/1‑93 (MQ=255)
       tGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTaa                                                                                  >  2:2892987/1‑93 (MQ=255)
        gagaTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAAt                                                                                 <  2:5426917/93‑1 (MQ=255)
         agaTCTGACCTATTTCATTCAGGCCCGTCCCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAAtt                                                                                <  2:8166999/93‑1 (MQ=255)
           aTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGc                                                                              >  2:4135971/1‑93 (MQ=255)
            tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             >  2:8312482/1‑93 (MQ=255)
            tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             <  1:1260188/93‑1 (MQ=255)
            tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             >  2:4499623/1‑93 (MQ=255)
            tCTGACCGATTTCATTCAGGCCCGTCACGCATTCAGCACTGGCGAGTTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             <  1:4282101/93‑1 (MQ=255)
             cTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAg                                                                            <  2:2229207/93‑1 (MQ=255)
               gACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCg                                                                          >  2:1008862/1‑93 (MQ=255)
                aCCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGa                                                                         <  2:5919010/93‑1 (MQ=255)
                 ccTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAg                                                                        >  2:6829448/1‑93 (MQ=255)
                    aTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGt                                                                     >  1:2808395/1‑93 (MQ=255)
                    aTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGCGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGt                                                                     <  1:1026199/93‑1 (MQ=255)
                       tcattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAg                                                                  <  2:677764/93‑1 (MQ=255)
                        tattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAgg                                                                 <  2:7001610/92‑1 (MQ=255)
                         attcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGc                                                                <  2:5349785/93‑1 (MQ=255)
                         attcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGc                                                                >  2:5012455/1‑93 (MQ=255)
                          ttcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCa                                                               >  2:4278397/1‑93 (MQ=255)
                          ttcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCa                                                               <  1:5480446/93‑1 (MQ=255)
                           tcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCaa                                                              >  1:315464/1‑93 (MQ=255)
                            caGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAg                                                             >  1:7550284/1‑93 (MQ=255)
                              ggCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTa                                                           >  2:3880281/1‑93 (MQ=255)
                              ggCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTa                                                           >  1:8258452/1‑93 (MQ=255)
                                cccGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAAt                                                         <  1:8725172/93‑1 (MQ=255)
                                 ccGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCTAGGGTGAGGCAAGTAAtt                                                        >  1:3916303/1‑93 (MQ=255)
                                  cGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTg                                                       <  2:6599349/93‑1 (MQ=255)
                                   gTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGt                                                      <  1:8000949/93‑1 (MQ=255)
                                   gTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGt                                                      <  1:1558129/93‑1 (MQ=255)
                                   gTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGAGAGGCAAGTAATTGt                                                      >  2:8736367/1‑93 (MQ=255)
                                    tCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGtt                                                     <  2:3163438/93‑1 (MQ=255)
                                    tCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGtt                                                     >  2:6455042/1‑93 (MQ=255)
                                     cACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGttt                                                    <  1:6573897/93‑1 (MQ=255)
                                     cACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGttt                                                    >  2:517753/1‑93 (MQ=255)
                                      aCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGTAGCGAGGGTGAGGCAAGTAATTGTTTc                                                   <  1:6950639/93‑1 (MQ=255)
                                       cGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCa                                                  >  2:2954943/1‑93 (MQ=255)
                                         cAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATc                                                <  1:4613702/93‑1 (MQ=255)
                                          aGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCg                                               >  2:3321114/1‑93 (MQ=255)
                                           gTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGt                                              >  1:8322598/1‑93 (MQ=255)
                                           gTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGt                                              <  1:1148461/93‑1 (MQ=255)
                                             cAGCACTTGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTATTTGTTTCATCGTCa                                            <  2:7143891/93‑1 (MQ=255)
                                             cAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCa                                            >  1:7199255/1‑93 (MQ=255)
                                              aGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAg                                           >  1:5273118/1‑93 (MQ=255)
                                              aGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAg                                           >  2:1348477/1‑93 (MQ=255)
                                                 aCTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTc                                        <  1:8630842/93‑1 (MQ=255)
                                                  cTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTcc                                       >  2:6229772/1‑93 (MQ=255)
                                                   tGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTCATTGTTTCATCGTCAGCTCCa                                      >  2:3631183/1‑93 (MQ=255)
                                                   tGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCa                                      >  2:7917669/1‑93 (MQ=255)
                                                    ggCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAt                                     <  1:5075957/93‑1 (MQ=255)
                                                     gCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGGAATTGTTTCATCGTCAGCTCCAtt                                    >  1:2923117/1‑93 (MQ=255)
                                                        aaTTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAttttt                                 <  1:2703870/93‑1 (MQ=255)
                                                          ttCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCg                               >  2:2656024/1‑93 (MQ=255)
                                                           tCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTACAGCGAGGGTGAGGCAAGTAATTGTTTCATCAACAGCTCCATTTTTCGt                              <  2:7818334/93‑1 (MQ=255)
                                                            cTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGtt                             <  2:4643654/93‑1 (MQ=255)
                                                            cTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGtt                             <  1:8095336/93‑1 (MQ=255)
                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGttt                            <  2:6722562/93‑1 (MQ=255)
                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGttt                            <  1:5560097/93‑1 (MQ=255)
                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGttt                            <  1:1357242/93‑1 (MQ=255)
                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATGGTTTCATCGTCAGCTCCCTTTTTCGttt                            >  1:4119604/1‑93 (MQ=255)
                                                              gCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTTGTTTc                           >  1:7469467/1‑93 (MQ=255)
                                                                aGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTccc                         >  2:572906/1‑93 (MQ=255)
                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCCGCTCCCTTTTTCGTTTcccc                        >  1:2372088/1‑93 (MQ=255)
                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTcccc                        >  1:924411/1‑93 (MQ=255)
                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTcccc                        <  1:3569253/93‑1 (MQ=255)
                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTcccc                        >  2:1588666/1‑93 (MQ=255)
                                                                  aCTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCca                       >  2:3777182/1‑93 (MQ=255)
                                                                   cTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCTGCTCCATTTTTCGTTTCCCcac                      >  1:608924/1‑93 (MQ=255)
                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    <  1:7587695/93‑1 (MQ=255)
                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    <  2:7253620/93‑1 (MQ=255)
                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    >  1:3437985/1‑93 (MQ=255)
                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    >  2:1816010/1‑93 (MQ=255)
                                                                      gcgcGTGGCGGTCGCAGGATGAGTTACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGGTAGCTCCATTTTTCGTTTCCCCACATg                   <  2:2533725/90‑1 (MQ=255)
                                                                       gCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGt                  <  2:1905603/93‑1 (MQ=255)
                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 <  1:2159968/93‑1 (MQ=255)
                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 <  2:1115634/93‑1 (MQ=255)
                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 <  2:143913/93‑1 (MQ=255)
                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 >  2:2066625/1‑93 (MQ=255)
                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 >  1:7124949/1‑93 (MQ=255)
                                                                         cGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTg                >  1:6276881/1‑93 (MQ=255)
                                                                          gTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGc               >  1:2593869/1‑93 (MQ=255)
                                                                          gTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGc               >  2:8602372/1‑93 (MQ=255)
                                                                           tGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCa              >  1:3303179/1‑93 (MQ=255)
                                                                             gcgcTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAgg            <  1:3102455/93‑1 (MQ=255)
                                                                             gcgcTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAgg            >  1:739887/1‑93 (MQ=255)
                                                                                cTCGCAGGATGAGTCACTAATTGCAGCGGGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCa         <  1:5715274/93‑1 (MQ=255)
                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       <  1:1791611/93‑1 (MQ=255)
                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       <  2:1153269/93‑1 (MQ=255)
                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       >  2:4714147/1‑93 (MQ=255)
                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       >  2:339831/1‑93 (MQ=255)
                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     <  1:7819824/93‑1 (MQ=255)
                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     <  1:3773207/93‑1 (MQ=255)
                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     >  2:357085/1‑93 (MQ=255)
                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     <  1:5919420/93‑1 (MQ=255)
                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTca     >  1:6704945/1‑92 (MQ=255)
                                                                                      ggATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAt   >  1:2243753/1‑93 (MQ=255)
                                                                                       gATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTACCCACATGTTGCAGGGCATTCCATc  >  1:4861722/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATC  >  NC_000913/4413738‑4413917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: