Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 578,027 T→C A30A (GCA→GCG ybcU ← Bor‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913578,0270TC99.7% 984.1 / ‑4.8 283A30A (GCA→GCGybcUBor‑like protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (110/172);  total (110/173)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.76e-01

Only 100 of 291 total aligned reads displayed.

GCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCAT  >  NC_000913/577937‑578116
                                                                                          |                                                                                         
gccgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTAccgc                                                                                         <  2:7533952/93‑1 (MQ=255)
  cgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTAccgctg                                                                                       <  1:4687694/93‑1 (MQ=255)
  cgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTAccgctg                                                                                       >  1:8790318/1‑93 (MQ=255)
  cgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTAccgctg                                                                                       <  2:7909123/93‑1 (MQ=255)
  cgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTAccgctg                                                                                       <  2:1076634/93‑1 (MQ=255)
  cgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTAccgctg                                                                                       <  1:6828868/93‑1 (MQ=255)
   gccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGctgt                                                                                      >  2:8786547/1‑93 (MQ=255)
     cacaAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGctgtct                                                                                    >  1:2629764/1‑93 (MQ=255)
        aaaTTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCtgtt                                                                                 <  1:7858822/93‑1 (MQ=255)
        aaaTTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCtgtt                                                                                 <  2:6708934/93‑1 (MQ=255)
          aTTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCtgtttg                                                                               >  1:2909235/1‑93 (MQ=255)
           ttttAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCtgtttgt                                                                              >  2:772823/1‑93 (MQ=255)
           ttttAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCtgtttgt                                                                              >  2:4190751/1‑93 (MQ=255)
           ttttAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCtgtttgt                                                                              <  2:8556227/93‑1 (MQ=255)
             ttAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTgtttgttt                                                                            <  1:1481986/93‑1 (MQ=255)
              tAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGtttt                                                                           <  1:7348785/93‑1 (MQ=255)
              tAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGtttt                                                                           <  1:5351079/93‑1 (MQ=255)
              tAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGtttt                                                                           <  2:8029560/93‑1 (MQ=255)
               aGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTg                                                                          >  2:3798850/1‑93 (MQ=255)
               aGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTg                                                                          <  2:5952160/93‑1 (MQ=255)
                 cTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGaa                                                                        <  1:3503893/93‑1 (MQ=255)
                   gCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACa                                                                      <  2:6020498/93‑1 (MQ=255)
                   gCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACa                                                                      <  2:1309243/93‑1 (MQ=255)
                   gCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACa                                                                      >  1:159715/1‑93 (MQ=255)
                   gCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACa                                                                      <  1:3222327/93‑1 (MQ=255)
                   gCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACa                                                                      <  2:700691/93‑1 (MQ=255)
                    cATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAg                                                                     <  1:3399252/93‑1 (MQ=255)
                     aTCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGt                                                                    <  2:6404952/93‑1 (MQ=255)
                     aTCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGt                                                                    >  2:6519185/1‑93 (MQ=255)
                      tCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTa                                                                   >  2:4739010/1‑93 (MQ=255)
                      tCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTa                                                                   >  1:2411696/1‑93 (MQ=255)
                      tCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTa                                                                   >  2:1172881/1‑93 (MQ=255)
                       cGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTaa                                                                  >  2:7769387/1‑93 (MQ=255)
                       cGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTaa                                                                  <  1:6048287/93‑1 (MQ=255)
                        gACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTaaa                                                                 <  1:2216167/93‑1 (MQ=255)
                          cAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATg                                                               >  1:8538131/1‑93 (MQ=255)
                          cAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATg                                                               <  1:4053459/93‑1 (MQ=255)
                            gTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTc                                                             >  2:2998323/1‑93 (MQ=255)
                            gTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTc                                                             <  1:1061979/93‑1 (MQ=255)
                             ttttCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCt                                                            <  2:7413037/93‑1 (MQ=255)
                              tttCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTg                                                           <  2:2441556/93‑1 (MQ=255)
                               ttcttcTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGt                                                          <  2:1060063/93‑1 (MQ=255)
                               ttcttcTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGt                                                          <  2:8101621/93‑1 (MQ=255)
                                tcttctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGtt                                                         >  1:6547033/1‑93 (MQ=255)
                                tcttctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGtt                                                         <  2:2843208/93‑1 (MQ=255)
                                  ttctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGa                                                       <  2:3046181/93‑1 (MQ=255)
                                  ttctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGa                                                       <  2:5839705/93‑1 (MQ=255)
                                  ttctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGa                                                       >  1:8264705/1‑93 (MQ=255)
                                   tctGCCCAATTCCAGAAGCGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAg                                                      <  1:8190045/93‑1 (MQ=255)
                                   tctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAg                                                      >  1:3900152/1‑93 (MQ=255)
                                     tGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGca                                                    <  2:3200756/93‑1 (MQ=255)
                                     tGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGca                                                    >  1:7946131/1‑93 (MQ=255)
                                       cccAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGcaca                                                  <  1:4421281/93‑1 (MQ=255)
                                         cAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATc                                                >  2:1608955/1‑93 (MQ=255)
                                         cAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATc                                                <  2:5043419/93‑1 (MQ=255)
                                          aaTTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATcc                                               >  1:7013281/1‑93 (MQ=255)
                                            ttCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTg                                             >  1:5741635/1‑93 (MQ=255)
                                             tCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGt                                            <  1:5201560/93‑1 (MQ=255)
                                             tCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGt                                            <  2:6146160/93‑1 (MQ=255)
                                              ccAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGta                                           >  2:4358747/1‑93 (MQ=255)
                                               cAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGtaa                                          >  1:2324376/1‑93 (MQ=255)
                                               cAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGtaa                                          >  2:2674489/1‑93 (MQ=255)
                                                 gAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGtaata                                        >  2:5649919/1‑93 (MQ=255)
                                                   aaCGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAg                                      >  2:2062624/1‑93 (MQ=255)
                                                   aaCGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAg                                      <  1:4863661/93‑1 (MQ=255)
                                                    aCGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGc                                     <  1:5936058/93‑1 (MQ=255)
                                                     cGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCa                                    <  2:3845856/93‑1 (MQ=255)
                                                      gaagaaATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAg                                   <  1:8041451/93‑1 (MQ=255)
                                                      gaagaaATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAg                                   <  1:4329185/93‑1 (MQ=255)
                                                      gaagaaATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAg                                   <  1:3065080/93‑1 (MQ=255)
                                                      gaagaaATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAg                                   >  1:1236946/1‑93 (MQ=255)
                                                       aagaaATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAgg                                  <  1:2567135/93‑1 (MQ=255)
                                                         gaaATGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGc                                >  1:1721714/1‑93 (MQ=255)
                                                          aaaTGATGGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGcc                               <  1:1932853/93‑1 (MQ=255)
                                                            atgatgGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAg                             >  2:2154327/1‑93 (MQ=255)
                                                             tgatgGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAgc                            >  1:2470648/1‑93 (MQ=255)
                                                               atgGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAgcgc                          >  1:5039254/1‑93 (MQ=255)
                                                               atgGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAgcgc                          <  1:5064371/93‑1 (MQ=255)
                                                                tgGGTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCa                         <  1:6391661/93‑1 (MQ=255)
                                                                  ggTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGt                       >  2:2779834/1‑93 (MQ=255)
                                                                  ggTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGt                       <  2:1750510/93‑1 (MQ=255)
                                                                   gTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTa                      >  1:4498052/1‑93 (MQ=255)
                                                                   gTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTa                      >  1:7507157/1‑93 (MQ=255)
                                                                   gTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTa                      <  1:411747/93‑1 (MQ=255)
                                                                   gTGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTCGTTTTGAACAGTAAATGTCTGTTGAGCACATCATGTAATAAGCAGGGCCAGCGCAGTa                      <  1:5365432/93‑1 (MQ=255)
                                                                    tGATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAg                     <  1:282183/93‑1 (MQ=255)
                                                                     gATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGc                    >  2:3464997/1‑93 (MQ=255)
                                                                       tGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGa                  <  2:3983017/93‑1 (MQ=255)
                                                                       tGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGa                  <  1:8398468/93‑1 (MQ=255)
                                                                        ggTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAg                 >  1:7150490/1‑93 (MQ=255)
                                                                         gTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAga                >  1:7543472/1‑92 (MQ=255)
                                                                          tttCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTa               >  2:3386021/1‑93 (MQ=255)
                                                                           ttCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAg              <  1:398824/93‑1 (MQ=255)
                                                                              cTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAt           <  2:1368930/93‑1 (MQ=255)
                                                                                  ggTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttttt       <  1:3613140/93‑1 (MQ=255)
                                                                                  ggTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttttt       >  2:1770143/1‑93 (MQ=255)
                                                                                   gTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAtttttt      <  1:1669670/93‑1 (MQ=255)
                                                                                    tGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttttttt     <  1:2552844/93‑1 (MQ=255)
                                                                                      cTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCa   <  2:5425798/93‑1 (MQ=255)
                                                                                      cTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCa   <  2:3571326/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCAT  >  NC_000913/577937‑578116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: