| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 624,133 | T→C | V9A (GTA→GCA) | entC → | isochorismate hydroxymutase 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 624,133 | 0 | T | C | 99.7% | 1241.4 / ‑5.2 | 358 | V9A (GTA→GCA) | entC | isochorismate hydroxymutase 2 |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (185/171); total (187/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
Only 100 of 373 total aligned reads displayed.
GGTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCT > NC_000913/624043‑624222 | gTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGcaca > 2:2701780/1‑93 (MQ=255) gTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGcaca < 2:1757467/93‑1 (MQ=255) gTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGcaca > 1:2497164/1‑93 (MQ=255) ttAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAcag > 2:3899450/1‑93 (MQ=255) ttAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGAATACGTCACTGGCTGAGGAAGCAcag < 1:6754227/93‑1 (MQ=255) tAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAcagc < 1:4436069/93‑1 (MQ=255) aGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAcagca < 1:2058938/93‑1 (MQ=255) aGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAcagca > 2:3741383/1‑93 (MQ=255) aGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAcagca > 2:1578905/1‑93 (MQ=255) gCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAcagcag > 1:8312606/1‑93 (MQ=255) aCCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGATGAAGCACAGCAGAcc > 2:2299332/1‑93 (MQ=255) aCCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGAAAAGCAGAcc > 1:3816243/1‑93 (MQ=255) ccGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCa < 1:2788402/93‑1 (MQ=255) cGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCAt < 1:3434933/93‑1 (MQ=255) gAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATg < 2:4550829/93‑1 (MQ=255) gAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATg > 2:834122/1‑93 (MQ=255) gAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATg > 1:1373439/1‑93 (MQ=255) aaaaTATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATgg > 2:8242128/1‑93 (MQ=255) aaaaTATAAATAATAATCATTATTAAAGCCTTTATCATTTGTGGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATgg < 1:4690517/93‑1 (MQ=255) aaaTATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGc < 1:5287198/93‑1 (MQ=255) aaaTATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGc < 1:6542191/93‑1 (MQ=255) tataAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAac > 1:5223157/1‑93 (MQ=255) tataAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAac > 1:2692783/1‑93 (MQ=255) taAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAacac < 1:3269949/93‑1 (MQ=255) taAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAacac > 1:2110970/1‑93 (MQ=255) aaTGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACtt < 1:5909457/93‑1 (MQ=255) aTGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTg < 1:878238/93‑1 (MQ=255) tGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCTCAGCAGACCATGGCAACACTTgc > 2:4733259/1‑93 (MQ=255) tGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTgc > 1:6962358/1‑93 (MQ=255) tGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTgc > 2:1292025/1‑93 (MQ=255) tAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGcc < 1:5576040/93‑1 (MQ=255) aaTCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGccc > 2:7027886/1‑93 (MQ=255) aaTCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGccc > 1:7455308/1‑93 (MQ=255) aaTCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGcca < 1:7089771/93‑2 (MQ=255) tCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCCCAGCAGACCATGGCAACACTTGCGCCCat > 1:4859517/1‑92 (MQ=255) tCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCaa > 1:1707802/1‑93 (MQ=255) tCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCaa < 2:3410236/93‑1 (MQ=255) cATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAAt < 1:2657121/93‑1 (MQ=255) cATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAAt < 2:3240444/93‑1 (MQ=255) attattAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATc > 2:2920461/1‑93 (MQ=255) ttattaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCg > 2:182643/1‑93 (MQ=255) tattaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGc < 2:6635547/93‑1 (MQ=255) attaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCt > 1:7868941/1‑93 (MQ=255) ttaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCtt > 2:6168949/1‑93 (MQ=255) ttaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCtt > 2:4498014/1‑93 (MQ=255) taAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCttt < 2:7727896/93‑1 (MQ=255) aaGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCttttt < 2:7357292/93‑1 (MQ=255) aGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTc > 2:278946/1‑93 (MQ=255) aGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTc < 1:8413799/93‑1 (MQ=255) gCCTTTATCATTTTGTGGAGTATGATATGGATACGTCACTGGCTGAGGAAGCGCAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCt < 2:4975940/93‑1 (MQ=255) ccTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCtt < 2:1124096/93‑1 (MQ=255) cTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCttt > 2:5921261/1‑93 (MQ=255) tttATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTa > 2:2228230/1‑93 (MQ=255) tttATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTa > 2:6474257/1‑93 (MQ=255) ttATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTAt < 2:8548976/93‑1 (MQ=255) ttATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTAt > 1:503569/1‑93 (MQ=255) tATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATg > 2:8423163/1‑93 (MQ=255) aTCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGt > 2:5261509/1‑93 (MQ=255) aTCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGt > 1:5480121/1‑93 (MQ=255) aTCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGt < 1:427087/93‑1 (MQ=255) tCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTc > 2:7550128/1‑93 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc < 2:5350693/93‑1 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc > 2:2812152/1‑93 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc > 1:4036807/1‑93 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc < 1:2232652/93‑1 (MQ=255) ttttGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGcc > 1:6487972/1‑93 (MQ=255) ttGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGt < 2:7333567/93‑1 (MQ=255) tgtgGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTa > 2:7985554/1‑93 (MQ=255) tgtgGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTa > 1:5137772/1‑93 (MQ=255) tgGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTAcc < 2:3635438/93‑1 (MQ=255) ggaggaTGATATGGATACGTCACTGGCTGAGGCAGCACAGCAGACCATGGCAACACTTGAGCCCAATCGCTTTTTCTTTATGTCGCCGTACCg > 1:1142717/1‑93 (MQ=255) ggaggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCg < 1:609250/93‑1 (MQ=255) ggaggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCg < 1:2916471/93‑1 (MQ=255) aggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCa < 2:1971169/93‑1 (MQ=255) aggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCa > 1:762843/1‑93 (MQ=255) aggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCa < 2:5749089/93‑1 (MQ=255) ggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAg > 2:8766447/1‑93 (MQ=255) gatATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGtttt > 1:1760843/1‑93 (MQ=255) gatATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGtttt < 2:6832861/93‑1 (MQ=255) tatGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTac < 1:1538764/93‑1 (MQ=255) ggATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTacgac < 2:5968772/93‑1 (MQ=255) ggATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTacgac < 2:4272327/93‑1 (MQ=255) gATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTacgacg > 1:3699764/1‑93 (MQ=255) tACGTCACTGGCTGAGGTAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCTCAGATTTACGACGTc > 2:7843974/1‑93 (MQ=255) tACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTc < 2:8628600/93‑1 (MQ=255) gTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAgg > 1:2332925/1‑93 (MQ=255) tCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGa < 2:621500/93‑1 (MQ=255) cACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTCCGACGTCAGGAt > 2:3102169/1‑93 (MQ=255) cACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGCTTTACGACGTCAGGAt > 2:5550952/1‑93 (MQ=255) aCTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATg > 1:8669116/1‑93 (MQ=255) aCTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATg > 2:246829/1‑93 (MQ=255) cTGGCTGAGGAAGCACAGCAGGCCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGt < 2:6368494/93‑1 (MQ=255) tGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGtt > 1:7745676/1‑93 (MQ=255) gCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTc < 1:6341918/93‑1 (MQ=255) cTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCg < 1:5409171/93‑1 (MQ=255) gAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGcc > 1:902346/1‑93 (MQ=255) aGGAAGCACAGCAGACCCTGGCAGCGCTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGccc < 2:4841570/93‑1 (MQ=255) gAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGc > 1:5522620/1‑93 (MQ=255) gAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGc < 1:1200152/93‑1 (MQ=255) aaGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCt < 2:8061825/93‑1 (MQ=255) | GGTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCT > NC_000913/624043‑624222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |