Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,592,156 (C)8→7 coding (3955/3978 nt) ydeK ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,592,1490C.99.5% 932.4 / ‑3.9 200coding (3962/3978 nt)ydeKhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base . (94/105);  total (94/106)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 242 total aligned reads displayed.

TACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGC  >  NC_000913/1592057‑1592237
                                                                                            |                                                                                        
 aCATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcc                                                                                         >  1:498499/1‑93 (MQ=255)
 aCATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcc                                                                                         >  1:4274629/1‑93 (MQ=255)
  cATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccc                                                                                        >  1:108880/1‑93 (MQ=255)
  cATTCCCCGGGTTCCCCCCTTGCCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccc                                                                                        <  1:4878090/93‑1 (MQ=255)
   aTTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcccc                                                                                       <  2:1310841/93‑1 (MQ=255)
    ttCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccccc                                                                                      >  1:1168390/1‑93 (MQ=255)
    ttCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccccc                                                                                      <  1:4658706/93‑1 (MQ=255)
    ttCCCCGGTTTACCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGCTGCCCCCGATAGAGGGTCTAGAGACAGTCAGTGacccc                                                                                      >  1:535805/1‑93 (MQ=255)
     tCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcccccc                                                                                     >  1:314073/1‑93 (MQ=255)
     tCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcccccc                                                                                     <  1:5300875/93‑1 (MQ=255)
     tCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcccccc                                                                                     <  1:2458326/93‑1 (MQ=255)
      ccccGGTTTCCCCCCTTCGCTATTCATTTGACCCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccccccc                                                                                    <  2:2265975/93‑1 (MQ=255)
      ccccGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccccccc                                                                                    <  1:4831671/93‑1 (MQ=255)
       cccGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcccccccc                                                                                   >  2:1468153/1‑93 (MQ=255)
       cccGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccccccca                                                                                   <  2:4673151/93‑2 (MQ=255)
       cccGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGccccccca                                                                                   <  1:3612816/93‑2 (MQ=255)
        ccGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcccccccag                                                                                  >  2:3821357/1‑91 (MQ=255)
          ggTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGcccccccaggc                                                                                >  1:779622/1‑89 (MQ=255)
              tCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATaa                                                                           >  2:6163347/1‑93 (MQ=255)
                cccccTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACg                                                                         >  2:5336365/1‑93 (MQ=255)
                cccccTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGCCATAACg                                                                         >  1:5902218/1‑93 (MQ=255)
                 ccccTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGt                                                                        <  1:5676444/93‑1 (MQ=255)
                  cccTTCGCTCTTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGtt                                                                       <  1:5239614/93‑1 (MQ=255)
                  cccTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGtt                                                                       >  2:6308002/1‑93 (MQ=255)
                   ccTTCGCTATTCATTTGAAACGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTTGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTc                                                                      >  2:5602393/1‑93 (MQ=255)
                     ttCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCat                                                                    <  2:203097/93‑1 (MQ=255)
                      tCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCata                                                                   >  1:3041162/1‑93 (MQ=255)
                        gCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATc                                                                 >  1:3432633/1‑93 (MQ=255)
                         cTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCa                                                                >  1:6141609/1‑93 (MQ=255)
                         cTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCa                                                                >  1:517241/1‑93 (MQ=255)
                          tATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCAc                                                               >  2:1016089/1‑93 (MQ=255)
                           aTTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCAcc                                                              <  2:3613523/93‑1 (MQ=255)
                           aTTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCAcc                                                              <  2:1885457/93‑1 (MQ=255)
                           aTTCATTTAAACCGTGCCCCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCAcc                                                              <  2:2497780/93‑1 (MQ=255)
                              cATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGc                                                           <  2:897295/93‑1 (MQ=255)
                                tttGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAg                                                         >  1:4692576/1‑93 (MQ=255)
                                tttGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAg                                                         >  2:220656/1‑93 (MQ=255)
                                   gAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAgtgg                                                      <  1:748407/93‑1 (MQ=255)
                                    aaCCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAgtggt                                                     >  1:1787684/1‑93 (MQ=255)
                                    aaCCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAgtggt                                                     <  1:4126213/93‑1 (MQ=255)
                                     aCCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAgtggtg                                                    >  2:6272393/1‑93 (MQ=255)
                                       cGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGAc                                                  <  2:3401130/93‑1 (MQ=255)
                                        gTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACa                                                 >  2:5448034/1‑93 (MQ=255)
                                        gTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACa                                                 >  1:1896665/1‑93 (MQ=255)
                                        gTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGGTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACa                                                 >  2:1195210/1‑93 (MQ=255)
                                         tGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACAt                                                >  1:3971538/1‑93 (MQ=255)
                                          gccgccATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACAtt                                               <  1:6450429/93‑1 (MQ=255)
                                           cctccATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACAttt                                              <  2:4502142/90‑1 (MQ=255)
                                            cgccATTCTCCAGGTTGCCGCCGATAGTAGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTc                                             <  2:6466366/93‑1 (MQ=255)
                                               cATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCg                                          >  1:606171/1‑93 (MQ=255)
                                                aTTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGa                                         >  2:4855998/1‑93 (MQ=255)
                                                 ttCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGAc                                        >  1:1458615/1‑93 (MQ=255)
                                                  tctcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACa                                       >  2:1708716/1‑93 (MQ=255)
                                                   ctcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACAt                                      >  1:661947/1‑93 (MQ=255)
                                                   ctcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACAt                                      >  1:4146267/1‑93 (MQ=255)
                                                    tcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATc                                     <  1:5428272/93‑1 (MQ=255)
                                                    tcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATc                                     >  2:1125123/1‑93 (MQ=255)
                                                    tcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATc                                     <  1:1424970/93‑1 (MQ=255)
                                                    tcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATc                                     >  1:1520499/1‑93 (MQ=255)
                                                    tcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATc                                     <  1:2813976/93‑1 (MQ=255)
                                                      cAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATcac                                   >  1:1853525/1‑93 (MQ=255)
                                                       aGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATcaca                                  >  1:5630955/1‑93 (MQ=255)
                                                       aGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATcaca                                  <  2:1032515/93‑1 (MQ=255)
                                                       aGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATcaca                                  >  2:2556503/1‑93 (MQ=255)
                                                       aGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATcaca                                  <  1:5933628/93‑1 (MQ=255)
                                                        ggTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCacac                                 >  2:4832516/1‑93 (MQ=255)
                                                        ggTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCacac                                 <  1:3066290/93‑1 (MQ=255)
                                                        ggTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCacac                                 >  2:806422/1‑93 (MQ=255)
                                                        ggTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGGGACATTTCCCGACATCacac                                 >  1:2222459/1‑93 (MQ=255)
                                                          ttGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCg                               >  2:2286718/1‑93 (MQ=255)
                                                          ttGCCGCCGATAGTGGTTGTAGCGACACGCAGTGCCCCCCCAGGCATAACGTGCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCg                               <  1:5395497/93‑1 (MQ=255)
                                                           tGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGc                              <  2:1816904/93‑1 (MQ=255)
                                                            gccgccGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCt                             >  1:4445461/1‑93 (MQ=255)
                                                              cgccgATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGt                           <  2:2717664/93‑1 (MQ=255)
                                                               gccgATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGtt                          >  2:1518103/1‑93 (MQ=255)
                                                                 cgATAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTAt                        <  1:3312906/93‑1 (MQ=255)
                                                                    tAGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGa                     >  2:3001345/1‑93 (MQ=255)
                                                                     aGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGat                    >  1:5741567/1‑93 (MQ=255)
                                                                     aGTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGat                    <  2:3050066/93‑1 (MQ=255)
                                                                      gTGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGata                   <  1:5990532/93‑1 (MQ=255)
                                                                       tGGTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGatat                  <  2:5783405/93‑1 (MQ=255)
                                                                        ggTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATAtt                 <  1:5796380/93‑1 (MQ=255)
                                                                        ggTTTTAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATAtt                 <  2:1623365/93‑1 (MQ=255)
                                                                          ttttAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTaa               <  1:5085633/93‑1 (MQ=255)
                                                                          ttttAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTaa               >  1:319889/1‑93 (MQ=255)
                                                                          ttttAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTaa               <  1:4361084/93‑1 (MQ=255)
                                                                            ttAGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAAtg             <  2:4149478/93‑1 (MQ=255)
                                                                              aGCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAAtgtg           <  1:6220530/93‑1 (MQ=255)
                                                                               gCGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATgtgt          >  2:2906166/1‑93 (MQ=255)
                                                                                cGACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGtt         <  1:1914058/93‑1 (MQ=255)
                                                                                 gACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTg        >  2:4031115/1‑93 (MQ=255)
                                                                                 gACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTg        >  1:2049121/1‑93 (MQ=255)
                                                                                 gACACGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTg        <  1:3796470/93‑1 (MQ=255)
                                                                                  acacGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGa       <  1:2774461/93‑1 (MQ=255)
                                                                                   cacGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGAc      <  1:984118/93‑1 (MQ=255)
                                                                                    acGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACt     >  2:4608246/1‑93 (MQ=255)
                                                                                    acGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACt     <  1:134961/93‑1 (MQ=255)
                                                                                     cGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACtt    <  2:5886864/93‑1 (MQ=255)
                                                                                     cGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACtt    <  2:4254904/93‑1 (MQ=255)
                                                                                     cGCAGTGCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACtt    <  2:3457426/93‑1 (MQ=255)
                                                                                            |                                                                                        
TACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGC  >  NC_000913/1592057‑1592237

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: