Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,202,504 (T)7→6 intergenic (+195/‑46) yehK → / → yehL hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,202,4980T.100.0% 642.6 / NA 136intergenic (+189/‑52)yehK/yehLhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (83/53);  total (83/53)

Only 100 of 158 total aligned reads displayed.

TGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTA  >  NC_000913/2202406‑2202586
                                                                                            |                                                                                        
tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGt                                                                                          >  1:435350/1‑93 (MQ=255)
tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGt                                                                                          >  1:3049265/1‑93 (MQ=255)
 ggTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtt                                                                                         >  1:5327176/1‑93 (MQ=255)
  gTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                                        >  2:4118443/1‑93 (MQ=255)
  gTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                                        >  2:6402695/1‑93 (MQ=255)
    tataATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttt                                                                                      >  2:3523558/1‑93 (MQ=255)
     ataATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                                     >  2:4413734/1‑93 (MQ=255)
      taATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttta                                                                                    >  2:1584817/1‑92 (MQ=255)
        aTTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttttatt                                                                                  <  1:5883206/93‑4 (MQ=255)
        aTTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttttatt                                                                                  <  2:1755365/93‑4 (MQ=255)
         ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttttattt                                                                                 <  1:1286645/93‑5 (MQ=255)
         ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttttattt                                                                                 >  2:447001/1‑89 (MQ=255)
          tcgttcgtTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTtttattta                                                                               <  2:1601579/93‑1 (MQ=255)
           cgttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTAc                                                                              <  1:4361206/93‑1 (MQ=255)
            gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACt                                                                             >  1:4834722/1‑93 (MQ=255)
            gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACt                                                                             >  1:3860175/1‑93 (MQ=255)
                gttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGa                                                                         >  1:1823983/1‑93 (MQ=255)
                gttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGa                                                                         <  2:942364/93‑1 (MQ=255)
                  tGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATc                                                                       >  2:4214564/1‑93 (MQ=255)
                   tgAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCt                                                                      <  2:5669578/92‑1 (MQ=255)
                     aaCACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGc                                                                    <  2:1022453/93‑1 (MQ=255)
                      acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCt                                                                   >  2:1668095/1‑93 (MQ=255)
                      acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCt                                                                   >  1:2360059/1‑93 (MQ=255)
                       cacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCtt                                                                  >  2:5129801/1‑93 (MQ=255)
                        acGATGTTGCAGAGGCTGTGGTGTTAGGCCTAAAAAGAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCttt                                                                 <  2:1462022/93‑1 (MQ=255)
                        acGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCttt                                                                 >  2:825973/1‑93 (MQ=255)
                        acGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCttt                                                                 >  1:3980354/1‑93 (MQ=255)
                        acGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCttt                                                                 >  1:4737943/1‑93 (MQ=255)
                         cGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTc                                                                >  2:2436448/1‑93 (MQ=255)
                          gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTcc                                                               >  1:5187620/1‑93 (MQ=255)
                          gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTcc                                                               <  2:3662850/93‑1 (MQ=255)
                           aTGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCa                                                              <  2:4970498/93‑1 (MQ=255)
                           aTGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCa                                                              <  1:3942262/93‑1 (MQ=255)
                            tGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTACAg                                                             >  1:707246/1‑93 (MQ=255)
                                    aGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                                     >  1:4974861/1‑93 (MQ=255)
                                     ggCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                    >  1:6091335/1‑93 (MQ=255)
                                         gtggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTc                                                <  2:6103878/93‑1 (MQ=255)
                                          tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCa                                               <  2:4646896/93‑1 (MQ=255)
                                             tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                            <  1:1363002/93‑1 (MQ=255)
                                             tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                            <  1:2806074/93‑1 (MQ=255)
                                             tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                            <  2:3198128/93‑1 (MQ=255)
                                             tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                            <  2:644382/93‑1 (MQ=255)
                                              gtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaaca                                           >  2:4566118/1‑93 (MQ=255)
                                              gtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaaca                                           <  2:506447/93‑1 (MQ=255)
                                               ttAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaa                                          >  1:1987705/1‑93 (MQ=255)
                                                tAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac                                         <  2:4152916/93‑1 (MQ=255)
                                                tAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac                                         <  1:5112730/93‑1 (MQ=255)
                                                 aGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                                        <  1:329995/93‑1 (MQ=255)
                                                  ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCACACAACTa                                       >  1:2999948/1‑93 (MQ=255)
                                                  ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTCTCCAGATATTTTTCGCTCAAACAACTa                                       >  1:5597707/1‑93 (MQ=255)
                                                    ccTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAAt                                     <  2:1531601/93‑1 (MQ=255)
                                                     cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg                                    <  1:1593247/93‑1 (MQ=255)
                                                     cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg                                    >  2:5845419/1‑93 (MQ=255)
                                                      tGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                                   >  1:4201157/1‑93 (MQ=255)
                                                      tGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCAGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                                   <  2:3351747/93‑1 (MQ=255)
                                                       gAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcg                                  >  1:1074699/1‑93 (MQ=255)
                                                        aaaaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                                 <  1:5992700/93‑1 (MQ=255)
                                                         aaaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGcc                                >  1:5784724/1‑93 (MQ=255)
                                                          aaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCa                               >  2:5783759/1‑93 (MQ=255)
                                                           aTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCaa                              >  2:1336686/1‑93 (MQ=255)
                                                            tAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCATATATTTTTCGCTCAAACAACTAATGCGCCaaa                             >  1:5278829/1‑93 (MQ=255)
                                                             aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAAc                            >  2:493752/1‑93 (MQ=255)
                                                             aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAAc                            >  1:1093461/1‑93 (MQ=255)
                                                             aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAAc                            >  1:6109180/1‑93 (MQ=255)
                                                              gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACa                           >  2:5627759/1‑93 (MQ=255)
                                                                  ataaaAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa                       <  1:2063485/93‑1 (MQ=255)
                                                                   taaaAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt                      >  2:5009514/1‑93 (MQ=255)
                                                                   taaaAGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt                      <  2:1782942/93‑1 (MQ=255)
                                                                     aaaGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTg                    >  2:4072188/1‑93 (MQ=255)
                                                                      aaGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc                   >  2:2284117/1‑93 (MQ=255)
                                                                      aaGAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc                   >  2:6117351/1‑93 (MQ=255)
                                                                        gAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc                 >  2:5576631/1‑93 (MQ=255)
                                                                        gAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc                 <  1:5421237/93‑1 (MQ=255)
                                                                        gAACCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc                 >  2:3940115/1‑93 (MQ=255)
                                                                         aaCCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                >  1:1789108/1‑93 (MQ=255)
                                                                          aCCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGt               >  1:670469/1‑93 (MQ=255)
                                                                          aCCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGt               >  2:704155/1‑93 (MQ=255)
                                                                          aCCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGt               >  2:4763621/1‑93 (MQ=255)
                                                                          aCCTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGt               >  1:3445514/1‑93 (MQ=255)
                                                                            cTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaa             >  2:4092602/1‑93 (MQ=255)
                                                                            cTGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaa             >  1:2522022/1‑93 (MQ=255)
                                                                             tGCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaaa            <  1:1977070/93‑1 (MQ=255)
                                                                              gCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaaaa           <  2:2061111/93‑1 (MQ=255)
                                                                              gCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaaaa           >  1:2738671/1‑93 (MQ=255)
                                                                              gCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaaaa           <  2:3106844/93‑1 (MQ=255)
                                                                              gCCTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaaaa           >  1:1392177/1‑93 (MQ=255)
                                                                               ccTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAat          <  2:4743275/93‑1 (MQ=255)
                                                                                cTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAata         <  2:3095955/93‑1 (MQ=255)
                                                                                cTCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAata         >  1:4183507/1‑93 (MQ=255)
                                                                                 tCACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAACCATTTATTGCGCGTAAAatat        <  2:6261898/93‑1 (MQ=255)
                                                                                  cACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATc       <  1:3384037/93‑1 (MQ=255)
                                                                                  cACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATc       >  1:2962822/1‑93 (MQ=255)
                                                                                  cACCAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATc       <  2:2832321/93‑1 (MQ=255)
                                                                                    ccAGCAGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGt     <  1:1370067/93‑1 (MQ=255)
                                                                                     cagcagGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt    <  1:4481474/93‑1 (MQ=255)
                                                                                     cagcagGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt    <  2:2472740/93‑1 (MQ=255)
                                                                                      agcagGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGttt   >  1:5359379/1‑93 (MQ=255)
                                                                                      agcagGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGttt   <  2:1268400/93‑1 (MQ=255)
                                                                                       gcagGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTa  >  1:3998221/1‑93 (MQ=255)
                                                                                       gcagGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTa  >  1:444885/1‑93 (MQ=255)
                                                                                            |                                                                                        
TGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTA  >  NC_000913/2202406‑2202586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: