Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,975,313 Δ1 bp intergenic (+173/‑901) wzxE → / → wecF putative cytochrome/TDP‑Fuc4NAc:lipidII transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,975,3100C.96.5% 766.2 / 19.6 173intergenic (+170/‑904)wzxE/wecFputative cytochrome/TDP‑Fuc4NAc:lipidII transferase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base . (77/89);  minor base T (3/3);  total (80/93)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.80e-01

Only 100 of 196 total aligned reads displayed.

CCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAT  >  NC_000913/3975219‑3975398
                                                                                           |                                                                                        
 cgcgACGAGCGGGCGCGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccc                                                                                        <  1:718516/93‑1 (MQ=255)
 cgcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccc                                                                                        <  1:1399371/93‑1 (MQ=255)
 cgcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccc                                                                                        >  2:1986990/1‑93 (MQ=255)
  gcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccct                                                                                       <  2:4220364/93‑2 (MQ=255)
    gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg                                                                                     >  2:2412962/1‑90 (MQ=255)
    gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg                                                                                     >  1:5602252/1‑90 (MQ=255)
    gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg                                                                                     <  1:299854/93‑4 (MQ=255)
     acgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACTGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctggg                                                                                    >  2:3903852/1‑89 (MQ=255)
     acgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctggg                                                                                    >  2:2895186/1‑89 (MQ=255)
     acgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctggg                                                                                    >  1:4887821/1‑89 (MQ=255)
     acgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctggg                                                                                    >  1:3940164/1‑89 (MQ=255)
      cgagcgagCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGa                                                                                  >  2:3836224/1‑93 (MQ=255)
        agcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGaaa                                                                                >  1:5310008/1‑93 (MQ=255)
        agcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGaaa                                                                                >  1:942363/1‑93 (MQ=255)
        agcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGaaa                                                                                >  2:6212070/1‑93 (MQ=255)
         gcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGaaaa                                                                               >  2:1206645/1‑93 (MQ=255)
          cgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGaaaaa                                                                              <  2:5825651/93‑1 (MQ=255)
           gagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGaaaaaa                                                                             >  2:2097737/1‑93 (MQ=255)
            agcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAAt                                                                            >  2:4174034/1‑93 (MQ=255)
            agcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAAt                                                                            <  2:1604146/93‑1 (MQ=255)
            agcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAAt                                                                            <  2:3739070/93‑1 (MQ=255)
             gcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATc                                                                           >  2:3129106/1‑93 (MQ=255)
               aCGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGc                                                                         >  1:344014/1‑93 (MQ=255)
               aCGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGc                                                                         >  2:1578006/1‑93 (MQ=255)
                cgcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCt                                                                        <  2:281443/93‑1 (MQ=255)
                 gcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGTGAAAAAATCGCTg                                                                       >  1:1625945/1‑93 (MQ=255)
                 gcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTg                                                                       <  2:4950935/93‑1 (MQ=255)
                 gcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTg                                                                       <  2:3352418/93‑1 (MQ=255)
                  cgcgcgAGTGTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTgg                                                                      <  2:2600382/93‑1 (MQ=255)
                    cgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCg                                                                    <  1:4561346/93‑1 (MQ=255)
                      cgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGa                                                                  >  2:3092412/1‑93 (MQ=255)
                       gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGaa                                                                 <  1:2965204/93‑1 (MQ=255)
                        aGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAg                                                                <  2:1249693/93‑1 (MQ=255)
                        aGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAg                                                                <  2:5995811/93‑1 (MQ=255)
                         gTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGc                                                               >  2:459370/1‑93 (MQ=255)
                         gTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGc                                                               <  2:4647269/93‑1 (MQ=255)
                          tttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTTCAATTTTTCTCTGGGCAAAAATCGCTTGCGGAAGCg                                                              >  2:4471662/1‑93 (MQ=255)
                           ttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCgg                                                             <  1:5396311/93‑1 (MQ=255)
                           ttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCgg                                                             >  1:4710910/1‑93 (MQ=255)
                            tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGt                                                            >  2:2160536/1‑93 (MQ=255)
                            tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGt                                                            <  2:2371280/93‑1 (MQ=255)
                            tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGt                                                            >  1:1275496/1‑93 (MQ=255)
                            tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGt                                                            <  1:4214065/93‑1 (MQ=255)
                             aTGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTc                                                           <  2:5987408/93‑1 (MQ=255)
                             aTGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTc                                                           <  2:3151359/93‑1 (MQ=255)
                             aTGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTc                                                           <  1:2970962/93‑1 (MQ=255)
                               ggTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAt                                                         <  2:6437947/93‑1 (MQ=255)
                               ggTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAt                                                         >  1:978720/1‑93 (MQ=255)
                                      ggCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGCAAAAATCGCTGGCGGAAGCGGTCATCGCGaaa                                                  >  1:6206315/1‑93 (MQ=255)
                                      ggCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGGGGTCATCGCGaaa                                                  >  1:2898142/1‑93 (MQ=255)
                                            gacgacGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCaaaa                                            <  1:6050527/93‑1 (MQ=255)
                                             acgactGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTGTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAg                                           <  1:691392/93‑1 (MQ=255)
                                              cgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGc                                          <  2:1324666/93‑1 (MQ=255)
                                              cgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGc                                          <  2:5314539/93‑1 (MQ=255)
                                               gacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCt                                         <  1:3490514/93‑1 (MQ=255)
                                                acgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTa                                        <  1:5883964/93‑1 (MQ=255)
                                                acgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTa                                        <  1:4299695/93‑1 (MQ=255)
                                                  gtcTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc                                      <  2:5919157/91‑1 (MQ=255)
                                                   gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc                                     >  2:3450882/1‑93 (MQ=255)
                                                   gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc                                     >  1:5715194/1‑93 (MQ=255)
                                                   gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc                                     >  2:3008128/1‑93 (MQ=255)
                                                    cTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCg                                    <  1:792006/93‑1 (MQ=255)
                                                     ttAAGTGATAGCTGTCCGGCTCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt                                   <  2:2080938/93‑1 (MQ=255)
                                                     ttAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt                                   >  2:5738397/1‑93 (MQ=255)
                                                     ttAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt                                   <  1:813513/93‑1 (MQ=255)
                                                      tAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTc                                  >  2:735713/1‑93 (MQ=255)
                                                      tAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTc                                  <  2:2495280/93‑1 (MQ=255)
                                                            aTAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCagcagc                            <  1:3064167/93‑1 (MQ=255)
                                                            aTAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCagcagc                            <  2:4092881/93‑1 (MQ=255)
                                                             tAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCg                           >  1:1593654/1‑93 (MQ=255)
                                                               gCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtt                         <  2:1699746/93‑1 (MQ=255)
                                                                    ccGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttc                    <  1:3865439/93‑1 (MQ=255)
                                                                     cGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttct                   >  2:1801015/1‑93 (MQ=255)
                                                                      ggCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttctt                  <  2:4661124/93‑1 (MQ=255)
                                                                      cgcgcTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttctt                  <  1:3673653/92‑1 (MQ=255)
                                                                       gcgcTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttcttc                 >  1:2001506/1‑93 (MQ=255)
                                                                       gcgcTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttcttc                 <  2:4331364/93‑1 (MQ=255)
                                                                          cTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAc              <  2:5940987/93‑1 (MQ=255)
                                                                          cTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAc              <  2:3410740/93‑1 (MQ=255)
                                                                          cTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAc              <  1:2868695/93‑1 (MQ=255)
                                                                            ttCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACgg            <  2:3045667/93‑1 (MQ=255)
                                                                            ttCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACgg            <  1:1873381/93‑1 (MQ=255)
                                                                            ttCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACgg            <  2:3939537/93‑1 (MQ=255)
                                                                            ttCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACgg            <  2:3271484/93‑1 (MQ=255)
                                                                              cTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCATGGTc          >  1:434622/1‑93 (MQ=255)
                                                                              cTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTc          >  1:3755289/1‑93 (MQ=255)
                                                                               tgtgCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa         >  1:110163/1‑93 (MQ=255)
                                                                               tgtgCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa         >  1:1533212/1‑93 (MQ=255)
                                                                               tgtgCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa         <  2:2749857/93‑1 (MQ=255)
                                                                               tgtgCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGGCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa         >  1:1133014/1‑93 (MQ=255)
                                                                                 tgCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCCCGGTCAGt       <  1:6288471/93‑1 (MQ=255)
                                                                                 tgCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGt       >  1:3454919/1‑93 (MQ=255)
                                                                                   cAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGtcc     <  1:5114988/93‑3 (MQ=255)
                                                                                    aaTTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCa    >  1:2474307/1‑93 (MQ=255)
                                                                                    aaTTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTCTTTCTTCCACGGTCAGTTCa    >  1:2583073/1‑93 (MQ=255)
                                                                                     aattttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCa    >  1:2749219/3‑93 (MQ=255)
                                                                                     aattttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCa    >  2:3580305/3‑93 (MQ=255)
                                                                                       ttttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAt  <  2:4983670/93‑1 (MQ=255)
                                                                                       ttttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAt  >  1:6426596/1‑93 (MQ=255)
                                                                                       ttttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAt  <  1:5246348/93‑1 (MQ=255)
                                                                                           |                                                                                        
CCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAT  >  NC_000913/3975219‑3975398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: