BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,415,996	(T)_6→7	coding (37/171 nt)	ydaE ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,415,990	1	.	T	99.1%	839.2 / ‑0.4	212	coding (43/171 nt)	ydaE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/1); new base T (115/95); total (116/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01

Only 100 of 246 total aligned reads displayed.

AGCTTCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑TTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAG  >  NC_000913/1415898‑1416077

aGCTTCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCTACGTc                                                                                            >  1:1862397/1‑93 (MQ=255)

aGCTTCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTc                                                                                            >  2:4669778/1‑93 (MQ=255)

 gCTTCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑t                                                                                          <  1:6108709/93‑1 (MQ=255)

 gCTTCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑t                                                                                          >  2:2122580/1‑93 (MQ=255)

  cTTCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑tt                                                                                         >  1:6299755/1‑93 (MQ=255)

   ttCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑ttt                                                                                        >  2:3428693/1‑93 (MQ=255)

   ttCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑ttt                                                                                        >  2:489348/1‑93 (MQ=255)

     cACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑ttttt                                                                                      <  1:3189608/93‑1 (MQ=255)

      aCTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑tttttt                                                                                     >  2:2979286/1‑93 (MQ=255)

      aCTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑tttttt                                                                                     >  1:3230284/1‑93 (MQ=255)

       cTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑ttttttt                                                                                    <  1:1647679/93‑2 (MQ=255)

       cTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑ttttttt                                                                                    <  1:3357834/93‑2 (MQ=255)

             tatTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAg                                                                             <  2:3212245/93‑1 (MQ=255)

              atTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAgg                                                                            <  2:1079500/93‑1 (MQ=255)

              atTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAgg                                                                            <  1:4221413/93‑1 (MQ=255)

               ttttCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAggt                                                                           >  2:5649727/1‑93 (MQ=255)

                tttCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAggtg                                                                          <  1:1178315/93‑1 (MQ=255)

                tttCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAggtg                                                                          <  2:6032453/93‑1 (MQ=255)

                 ttCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAggtgg                                                                         <  2:1677679/93‑1 (MQ=255)

                  tctcGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAggtggt                                                                        >  2:2267041/1‑93 (MQ=255)

                     cGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAg                                                                     >  1:3466628/1‑93 (MQ=255)

                        ttCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGcac                                                                  >  1:6425596/1‑93 (MQ=255)

                         tCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGcaca                                                                 >  2:4107864/1‑93 (MQ=255)

                          cGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACat                                                                <  2:2802083/93‑1 (MQ=255)

                          cGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACat                                                                >  1:2757916/1‑93 (MQ=255)

                           gTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatt                                                               <  2:5821445/93‑1 (MQ=255)

                           gTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatt                                                               >  2:2347265/1‑93 (MQ=255)

                            tCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattt                                                              >  2:4229655/1‑93 (MQ=255)

                            tCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattt                                                              <  2:5381259/93‑1 (MQ=255)

                            tCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattt                                                              >  1:4067544/1‑93 (MQ=255)

                            tCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattt                                                              >  2:2759063/1‑93 (MQ=255)

                             cTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatttt                                                             >  1:6408983/1‑93 (MQ=255)

                              ttttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatttta                                                            <  2:4762180/93‑1 (MQ=255)

                              ttttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatttta                                                            <  1:5628217/93‑1 (MQ=255)

                              ttttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatttta                                                            >  1:566818/1‑93 (MQ=255)

                              ttttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatttta                                                            <  2:5164160/93‑1 (MQ=255)

                              ttttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACatttta                                                            >  1:5903297/1‑93 (MQ=255)

                               tttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattttat                                                           <  1:2891284/93‑1 (MQ=255)

                               tttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattttat                                                           <  1:4834788/93‑1 (MQ=255)

                                ttGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattttatt                                                          <  2:549529/93‑1 (MQ=255)

                                 tGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattttattt                                                         <  1:3976992/93‑1 (MQ=255)

                                  gATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACattttatttt                                                        >  2:5063043/1‑93 (MQ=255)

                                   aTAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTc                                                       <  2:1116994/93‑1 (MQ=255)

                                   aTAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTc                                                       <  1:4747493/93‑1 (MQ=255)

                                   aTAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTc                                                       <  2:802718/93‑1 (MQ=255)

                                     aaaaTCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCtt                                                     >  2:6429006/1‑93 (MQ=255)

                                     aaaaTCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCtt                                                     >  2:144369/1‑93 (MQ=255)

                                      aaaTCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTa                                                    <  1:5539596/93‑1 (MQ=255)

                                        aTCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGt                                                  >  2:3059667/1‑93 (MQ=255)

                                         tCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtc                                                 >  2:1518743/1‑93 (MQ=255)

                                         tCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtc                                                 <  2:6362759/93‑1 (MQ=255)

                                         tCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtc                                                 >  2:3911897/1‑93 (MQ=255)

                                         tCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtc                                                 >  1:2986121/1‑93 (MQ=255)

                                          cccGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtca                                                <  2:1712194/93‑1 (MQ=255)

                                          cccGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtca                                                <  2:5938593/93‑1 (MQ=255)

                                           ccGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtcat                                               >  1:2309531/1‑93 (MQ=255)

                                            cGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtcatc                                              <  1:3403957/93‑1 (MQ=255)

                                            cGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGtcatc                                              <  1:1021913/93‑1 (MQ=255)

                                               gCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCAcc                                           >  2:2510046/1‑93 (MQ=255)

                                                cATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCa                                          <  2:1037986/93‑1 (MQ=255)

                                                 aTGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCAt                                         <  1:2550507/93‑1 (MQ=255)

                                                 aTGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCAt                                         <  1:16982/93‑1 (MQ=255)

                                                  tgaagtgaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATg                                        >  2:5641926/1‑93 (MQ=255)

                                                  tgaagtgaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATg                                        >  2:1873340/1‑93 (MQ=255)

                                                   gaagtgaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGa                                       >  2:3631095/1‑93 (MQ=255)

                                                     agtgaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACt                                     >  2:4008877/1‑93 (MQ=255)

                                                      gtgaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTc                                    <  1:701229/93‑1 (MQ=255)

                                                       tgaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTcc                                   >  1:386584/1‑93 (MQ=255)

                                                        gaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCg                                  >  2:5666525/1‑93 (MQ=255)

                                                        gaagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCg                                  >  2:916023/1‑93 (MQ=255)

                                                         aagCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGc                                 >  1:5534558/1‑93 (MQ=255)

                                                          agCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGcc                                <  2:2902143/93‑1 (MQ=255)

                                                          agCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGcc                                >  2:4447547/1‑93 (MQ=255)

                                                           gCATTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCt                               >  2:3714419/1‑93 (MQ=255)

                                                             aTTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCttt                             >  2:5159957/1‑93 (MQ=255)

                                                             aTTCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCttt                             >  1:6006482/1‑93 (MQ=255)

                                                              ttCTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTa                            >  2:3394305/1‑93 (MQ=255)

                                                                cTTTCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACa                          >  1:5751606/1‑93 (MQ=255)

                                                                 tttCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAg                         >  2:500621/1‑93 (MQ=255)

                                                                   tCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGt                       >  2:6368879/1‑93 (MQ=255)

                                                                   tCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGt                       >  1:4548112/1‑93 (MQ=255)

                                                                   tCAATAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGt                       >  2:1194520/1‑93 (MQ=255)

                                                                      aTAGCTTTGCTTTCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTaaa                    <  1:2859012/93‑1 (MQ=255)

                                                                      aTAGCTTTGCTTTCTTCAACGTC‑TTTTTTTGGCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTaa                     >  2:2728692/1‑93 (MQ=255)

                                                                         gctttgctttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCa                 >  1:3676057/1‑93 (MQ=255)

                                                                         gctttgctttCTTCAACGTC‑TTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCAt                <  2:1395659/93‑1 (MQ=255)

                                                                           tttgctttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATc               <  2:3529971/93‑1 (MQ=255)

                                                                            ttgctttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCa              >  1:948369/1‑93 (MQ=255)

                                                                              gctttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACg            >  1:4966976/1‑93 (MQ=255)

                                                                              gctttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACg            >  1:2624908/1‑93 (MQ=255)

                                                                               ctttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGa           <  1:5295157/93‑1 (MQ=255)

                                                                               ctttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGa           <  1:6331640/93‑1 (MQ=255)

                                                                                tttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGAc          <  2:660976/93‑1 (MQ=255)

                                                                                tttCTTCAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGAc          <  1:119472/93‑1 (MQ=255)

                                                                                 ttcttcAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGAcc         >  2:2483540/1‑93 (MQ=255)

                                                                                     tcAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAgg     <  1:5851840/93‑1 (MQ=255)

                                                                                     tcAACGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAgg     <  1:1518743/93‑1 (MQ=255)

                                                                                       aaCGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGaa   >  1:5429938/1‑93 (MQ=255)

                                                                                       aaCGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGaa   >  1:3520660/1‑93 (MQ=255)

                                                                                        aCGTCTTTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAg  >  2:6224675/1‑93 (MQ=255)

AGCTTCACTGCAATATTTTCTCGGTTCGTCTTTTGATAAAATCCCGTGCATGAAGTGAAGCATTCTTTCAATAGCTTTGCTTTCTTCAACGTC‑TTTTTT‑‑GCAAAGGTGGTAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAG  >  NC_000913/1415898‑1416077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`