Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,537,405 | +GC | intergenic (+61/‑394) | b3407 → / → feoA | hypothetical protein/ferrous iron transport protein A |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,537,404 | 1 | . | C | 99.5% | 708.4 / ‑3.8 | 207 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (94/112); total (94/113) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
* | NC_000913 | 3,537,404 | 2 | . | G | 99.5% | 701.8 / ‑3.8 | 206 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (93/112); total (93/113) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 |
Only 100 of 228 total aligned reads displayed.
GCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑CCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATA > NC_000913/3537312‑3537487 || cgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑c > 1:3109640/1‑93 (MQ=255) cgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑c < 2:4763745/93‑1 (MQ=255) gcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑cg < 1:3046300/93‑2 (MQ=255) gcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑cg > 1:1458736/1‑92 (MQ=255) tGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑cgcc > 1:124998/1‑90 (MQ=255) ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑cgccg > 2:1929073/1‑89 (MQ=255) ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑cgccg < 1:2095403/93‑5 (MQ=255) ggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTg > 2:3746183/1‑93 (MQ=38) cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGc < 2:2891767/93‑1 (MQ=38) aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCa > 2:1718745/1‑93 (MQ=37) aTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaa > 2:1029538/1‑93 (MQ=37) aTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaa < 2:5704027/93‑1 (MQ=37) tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaac > 1:5470616/1‑93 (MQ=37) tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaac > 2:2093979/1‑93 (MQ=37) gCAAAAAACGTTAAACGCCCGTCCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaacgaa < 2:1411044/93‑1 (MQ=37) gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAACTCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaacgaa < 2:3430750/93‑1 (MQ=37) gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaacgaa < 1:6204638/93‑1 (MQ=37) cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaacgaac < 2:4244680/93‑1 (MQ=38) aaaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaacgaac < 2:5961112/92‑1 (MQ=37) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCaacgaacg < 1:2640340/93‑1 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGc > 1:5175749/1‑93 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGc > 1:5907412/1‑93 (MQ=37) aaaaCGTTAAACGCCCGTCCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGcc < 1:5114533/93‑1 (MQ=37) aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGcc < 2:6150385/93‑1 (MQ=37) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCt < 1:4652413/93‑1 (MQ=37) aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCtt > 1:6027643/1‑93 (MQ=37) aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCtt < 1:4760232/93‑1 (MQ=37) ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCt < 2:44494/93‑1 (MQ=37) ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCt < 1:1710516/93‑1 (MQ=37) aCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACa > 2:2460032/1‑93 (MQ=38) aCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACa < 2:1566221/93‑1 (MQ=37) cGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACAt < 1:1104389/93‑1 (MQ=37) cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaa > 1:4371759/1‑93 (MQ=38) cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaa < 2:5928501/93‑1 (MQ=37) ccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaa > 1:5193074/1‑93 (MQ=38) cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaaa > 1:1016234/1‑93 (MQ=38) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg < 2:4794862/93‑1 (MQ=37) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg < 2:3036817/93‑1 (MQ=37) tACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGt < 1:4673244/93‑1 (MQ=37) cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc > 1:3891962/1‑93 (MQ=38) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc < 2:657145/93‑1 (MQ=37) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc < 1:1004822/93‑1 (MQ=37) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc < 2:4290371/93‑1 (MQ=37) ggCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCg < 2:5290184/93‑1 (MQ=37) ggCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCg < 2:1764763/93‑1 (MQ=37) gCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg < 1:5034301/93‑1 (MQ=37) ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGga > 1:1938630/1‑93 (MQ=38) ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGga < 1:2848171/93‑1 (MQ=37) cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCACATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgag < 2:4532772/93‑1 (MQ=37) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa > 1:934712/1‑93 (MQ=38) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa < 1:2487332/93‑1 (MQ=37) cGGTTCGAATTTGCACGAAATCGTAGGGCAAATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAat < 1:4782624/93‑1 (MQ=37) ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata > 2:3876827/1‑93 (MQ=38) ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTC‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata < 1:5737597/93‑1 (MQ=38) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 1:3716714/1‑93 (MQ=38) ttCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtc > 1:3619791/1‑93 (MQ=37) ttCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtc > 2:5849905/1‑93 (MQ=38) ttCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtc < 1:1486962/93‑1 (MQ=37) tCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct > 1:1376656/1‑93 (MQ=38) cGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc < 1:6374571/93‑1 (MQ=37) cGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc < 2:3247239/93‑1 (MQ=37) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCGCG‑‑CCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc < 1:4019082/93‑1 (MQ=38) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc < 2:5822606/93‑1 (MQ=37) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc > 2:2776963/1‑93 (MQ=38) aaTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCg > 2:3823460/1‑93 (MQ=38) aaTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCg > 2:4622797/1‑93 (MQ=38) aaTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCg > 2:5516652/1‑93 (MQ=38) aaTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCg < 1:5415579/93‑1 (MQ=37) aTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCgg < 2:1797710/93‑1 (MQ=38) aTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCgg > 1:2242395/1‑93 (MQ=38) aTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCgg > 1:4582995/1‑93 (MQ=38) gCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt < 1:3455593/93‑1 (MQ=38) gCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt < 2:2156495/93‑1 (MQ=38) gCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt < 2:5201516/93‑1 (MQ=38) gCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt > 1:1734846/1‑93 (MQ=38) gCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt < 1:885284/93‑1 (MQ=38) gCACGAAATCGTAGGCCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt < 1:2959127/93‑1 (MQ=37) cACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttt < 1:1019429/93‑1 (MQ=38) aCGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtttt < 2:5632316/93‑1 (MQ=38) aCGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtttt < 2:3986844/93‑1 (MQ=38) cGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttttt < 2:4104115/93‑1 (MQ=38) aaaTCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAt < 2:3951970/93‑1 (MQ=38) aaaTCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAt > 1:5594604/1‑93 (MQ=38) aaTCGTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCACTtttttt > 1:38492/1‑93 (MQ=37) tCGTAGGGCAGATAAGGCGTC‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTcc < 2:10853/93‑1 (MQ=38) gTAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac < 1:4270920/93‑1 (MQ=38) tAGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca < 2:2856225/93‑1 (MQ=38) aGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGTCGGAGTATATCTCCGGCATTTTTATTCCACAg > 2:327575/1‑93 (MQ=37) aGGGCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAg > 2:505397/1‑93 (MQ=38) gggCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc > 2:3623265/1‑93 (MQ=38) ggCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGcc < 2:5597206/93‑1 (MQ=38) gCAGATAAGGCTTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCa < 2:5398467/93‑1 (MQ=38) gCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGGATATCTCCGGCATTTTTATTCCACAGCCa > 2:1472803/1‑93 (MQ=38) gCAGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCa < 1:2165695/93‑1 (MQ=38) aGATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaaa > 2:5125104/1‑93 (MQ=38) gATAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAAc < 1:3266140/93‑1 (MQ=38) aTAAGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACt < 1:563473/93‑1 (MQ=38) aGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat < 1:1660735/93‑1 (MQ=39) aGGCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat > 1:5786614/1‑93 (MQ=255) ggCGTT‑‑CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCata < 1:778903/93‑1 (MQ=39) || GCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑CCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATA > NC_000913/3537312‑3537487 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |