BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,544,357	+G	coding (163/1314 nt)	gntT →	gluconate permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,544,356	1	.	G	100.0%	696.8 / NA	199	V54V (GTC→GTG)	gntT	gluconate permease
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (92/107); total (92/107)

Only 100 of 225 total aligned reads displayed.

GGCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTC‑GC‑GG‑ACG‑TCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAA  >  NC_000913/3544264‑3544437

ggCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc                                                                                       <  2:3741711/93‑1 (MQ=255)

ggCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc                                                                                       >  2:5701111/1‑93 (MQ=255)

ggCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc                                                                                       <  1:2854127/93‑1 (MQ=255)

ggCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc                                                                                       <  1:2411514/93‑1 (MQ=255)

ggCTTCATCGCTCTCGGCCTTGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc                                                                                       <  2:4284282/93‑1 (MQ=255)

 gCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc‑g                                                                                     <  2:1016340/93‑1 (MQ=255)

 gCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc‑g                                                                                     >  2:717309/1‑93 (MQ=255)

  cTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc‑gg                                                                                    <  1:8253/93‑2 (MQ=255)

  cTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCGCCATCAAAGCCGGTGTc‑gg                                                                                    >  1:1118560/1‑92 (MQ=255)

    tCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc‑ggcg                                                                                  >  1:3471965/1‑90 (MQ=255)

    tCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCAGCTGGATAAAGTTATTGGCTCCATCACAGCCGGTGTc‑ggcg                                                                                  >  2:4033214/1‑90 (MQ=255)

     cATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTc‑ggcgg                                                                                 <  1:2775205/93‑5 (MQ=255)

                   tCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGcc                                                                   <  2:294064/93‑1 (MQ=255)

                   tCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGcc                                                                   >  1:3601089/1‑93 (MQ=255)

                    cGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCt                                                                  <  1:4649032/93‑1 (MQ=255)

                     gTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCtt                                                                 <  1:1663260/93‑1 (MQ=255)

                     gTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCtt                                                                 <  1:5667317/93‑1 (MQ=255)

                     gTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCtt                                                                 >  1:3116712/1‑93 (MQ=255)

                       ggCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGc                                                               <  2:4766981/93‑1 (MQ=255)

                       ggCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGc                                                               >  2:3353738/1‑93 (MQ=255)

                        gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGcc                                                              <  1:2986960/93‑1 (MQ=255)

                        gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGcc                                                              <  2:1765815/93‑1 (MQ=255)

                        gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGcc                                                              >  2:4682218/1‑93 (MQ=255)

                         cgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGccc                                                             <  1:6026706/93‑1 (MQ=255)

                         cgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGccc                                                             <  2:2261455/93‑1 (MQ=255)

                           cTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTg                                                           >  1:5105290/1‑93 (MQ=255)

                            ttGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGa                                                          <  1:2870609/93‑1 (MQ=255)

                             tGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGAt                                                         <  2:1561723/93‑1 (MQ=255)

                             tGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGAt                                                         >  2:5109180/1‑93 (MQ=255)

                             tGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGAt                                                         <  2:841549/93‑1 (MQ=255)

                               cTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCa                                                       >  2:603140/1‑93 (MQ=255)

                                tGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCAt                                                      <  1:3953890/93‑1 (MQ=255)

                                tGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCAt                                                      <  1:1818083/93‑1 (MQ=255)

                                 gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  2:434862/1‑93 (MQ=255)

                                 gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  1:630737/1‑93 (MQ=255)

                                  ttGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATgg                                                    <  2:2791612/93‑1 (MQ=255)

                                   tGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATggg                                                   <  2:6221218/93‑1 (MQ=255)

                                   tGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATggg                                                   >  1:4108350/1‑93 (MQ=255)

                                     gATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATggggt                                                 >  2:1024910/1‑91 (MQ=255)

                                      aTTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCAGCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGttt                                                <  2:2618607/93‑1 (MQ=255)

                                       ttAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGtttt                                               >  2:1928401/1‑93 (MQ=255)

                                        tAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTg                                              <  2:4470351/93‑1 (MQ=255)

                                        tAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTg                                              <  1:3853823/93‑1 (MQ=255)

                                         aaTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTgg                                             <  2:3808332/93‑1 (MQ=255)

                                         aaTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTgg                                             >  1:1726750/1‑93 (MQ=255)

                                          aTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTggg                                            >  1:148921/1‑92 (MQ=255)

                                          aTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgc                                            <  1:670855/93‑1 (MQ=255)

                                          aTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgc                                            >  1:1002946/1‑93 (MQ=255)

                                            gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          >  1:807979/1‑93 (MQ=255)

                                            gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          >  1:5415195/1‑93 (MQ=255)

                                            gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          >  2:2156817/1‑93 (MQ=255)

                                            gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          <  2:1116035/93‑1 (MQ=255)

                                              aaGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCaa                                        <  2:3919931/93‑1 (MQ=255)

                                              aaGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCaa                                        >  1:764118/1‑93 (MQ=255)

                                              aaGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCaa                                        >  2:5906254/1‑93 (MQ=255)

                                              aaGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCaa                                        >  1:3706515/1‑93 (MQ=255)

                                               aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAAt                                       >  2:3691094/1‑93 (MQ=255)

                                               aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAAt                                       >  1:5265748/1‑93 (MQ=255)

                                               aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGCTTTGGCGCAAt                                       >  1:2907783/1‑93 (MQ=255)

                                                ggAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATg                                      >  2:6070675/1‑93 (MQ=255)

                                                 gAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGc                                     <  2:5343366/93‑1 (MQ=255)

                                                 gAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGc                                     <  2:300432/93‑1 (MQ=255)

                                                  aaTGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCt                                    <  1:13336/93‑1 (MQ=255)

                                                  aaTGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCt                                    <  1:908977/93‑1 (MQ=255)

                                                   aTGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTg                                   <  2:2841632/93‑1 (MQ=255)

                                                    tGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTgg                                  >  1:4337722/1‑93 (MQ=255)

                                                      ccGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGc                                <  2:671089/93‑1 (MQ=255)

                                                        gCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaa                              <  1:2066576/93‑1 (MQ=255)

                                                          tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            >  2:5207606/1‑93 (MQ=255)

                                                          tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  1:61911/93‑1 (MQ=255)

                                                          tGGATAAAGTGATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  1:4198202/93‑1 (MQ=255)

                                                            gATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATg                          >  2:1870955/1‑93 (MQ=255)

                                                            gATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATg                          <  1:5025083/93‑1 (MQ=255)

                                                              tAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCt                        <  2:2018274/93‑1 (MQ=255)

                                                              tAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCt                        <  2:1406692/93‑1 (MQ=255)

                                                               aaaGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTg                       <  2:5451497/93‑1 (MQ=255)

                                                                aaGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTgg                      <  2:3176587/93‑1 (MQ=255)

                                                                 aGTTATTGTCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGc                     <  2:913792/93‑1 (MQ=255)

                                                                 aGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGc                     >  2:3530176/1‑93 (MQ=255)

                                                                    tATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGGTTTGGCGCAATGCTGGGCAAAATGCTGGCAGa                  >  1:3800258/1‑93 (MQ=255)

                                                                        ggCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGc              <  2:5181546/93‑1 (MQ=255)

                                                                        ggCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGc              <  2:4864766/93‑1 (MQ=255)

                                                                          cTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCgg            >  1:5843805/1‑93 (MQ=255)

                                                                           tCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGt           <  2:2397429/93‑1 (MQ=255)

                                                                           tCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGt           <  2:5557625/93‑1 (MQ=255)

                                                                            ccATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          <  1:1601169/93‑1 (MQ=255)

                                                                            ccATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          <  1:4249307/93‑1 (MQ=255)

                                                                            ccATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          >  1:4466493/1‑93 (MQ=255)

                                                                            ccAGCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          <  2:4147349/93‑1 (MQ=255)

                                                                             cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         <  2:5097941/93‑1 (MQ=255)

                                                                             cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         >  1:2033017/1‑93 (MQ=255)

                                                                             cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         <  2:4836349/93‑1 (MQ=255)

                                                                              aTCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgc        <  1:5151500/93‑1 (MQ=255)

                                                                              aTCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgc        >  2:2452206/1‑93 (MQ=255)

                                                                              aTCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgc        <  2:1550626/93‑1 (MQ=255)

                                                                              aTCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACGGCGGTGgc        <  1:6269455/93‑1 (MQ=255)

                                                                                 aaaGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGca     >  1:4171115/1‑93 (MQ=255)

                                                                                   aGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGcaca   >  1:4879098/1‑93 (MQ=255)

                                                                                   aGCCGGTGTCGGC‑GGAACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGcaca   >  2:105770/1‑93 (MQ=255)

                                                                                    gCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACaa  <  1:1986708/93‑1 (MQ=255)

GGCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTC‑GC‑GG‑ACG‑TCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAA  >  NC_000913/3544264‑3544437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`