BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,544,363	+C	coding (169/1314 nt)	gntT →	gluconate permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,544,363	1	.	C	100.0%	679.4 / NA	197	V57L (GTC→CTC)	gntT	gluconate permease
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (90/107); total (90/107)

Only 100 of 200 total aligned reads displayed.

TCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTC‑GC‑GG‑ACG‑TCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAA  >  NC_000913/3544283‑3544437

tCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGcc                                                                   <  2:294064/93‑1 (MQ=255)

tCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGcc                                                                   >  1:3601089/1‑93 (MQ=255)

tCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGcc                                                                   >  1:992207/1‑93 (MQ=255)

 cGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCt                                                                  <  1:514835/93‑1 (MQ=255)

 cGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCt                                                                  <  1:3055958/93‑1 (MQ=255)

 cGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCt                                                                  >  1:5099782/1‑93 (MQ=255)

  gTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCtt                                                                 <  1:1663260/93‑1 (MQ=255)

    ggCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGc                                                               <  2:4766981/93‑1 (MQ=255)

     gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGcc                                                              >  2:4682218/1‑93 (MQ=255)

     gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGcc                                                              <  2:3480184/93‑1 (MQ=255)

      cgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGccc                                                             <  2:2261455/93‑1 (MQ=255)

      cgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGccc                                                             <  2:4111342/93‑1 (MQ=255)

       gcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCt                                                            <  2:5314005/93‑1 (MQ=255)

        cTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTg                                                           <  1:6153495/93‑1 (MQ=255)

         ttGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGa                                                          <  1:2870609/93‑1 (MQ=255)

          tGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGAt                                                         <  2:841549/93‑1 (MQ=255)

          tGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGAt                                                         >  2:5109180/1‑93 (MQ=255)

            cTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCa                                                       >  2:603140/1‑93 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATg                                                     <  1:367774/93‑1 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  2:6247069/1‑93 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  1:630737/1‑93 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  2:4299986/1‑93 (MQ=255)

                tGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATggg                                                   >  1:4108350/1‑93 (MQ=255)

                tGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATggg                                                   >  2:4602967/1‑93 (MQ=255)

                 ggATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGt                                                  <  2:174715/93‑1 (MQ=255)

                  gATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATggggt                                                 >  2:1024910/1‑91 (MQ=255)

                  gATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATggggt                                                 >  1:4541084/1‑91 (MQ=255)

                   aTTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGttt                                                <  2:1507673/93‑1 (MQ=255)

                   aTTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGttt                                                <  2:1777178/93‑1 (MQ=255)

                   aTTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCAGCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGttt                                                <  2:2618607/93‑1 (MQ=255)

                    ttAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGtttt                                               <  1:801499/93‑1 (MQ=255)

                    ttAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGtttt                                               >  2:1928401/1‑93 (MQ=255)

                      aaTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTgg                                             <  2:3802003/93‑1 (MQ=255)

                      aaTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTgg                                             >  2:4433669/1‑93 (MQ=255)

                      aaTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTgg                                             >  1:1726750/1‑93 (MQ=255)

                       aTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgc                                            >  1:1002946/1‑93 (MQ=255)

                       aTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgc                                            <  1:670855/93‑1 (MQ=255)

                       aTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgc                                            >  1:3268039/1‑93 (MQ=255)

                       aTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgc                                            <  1:3877376/93‑1 (MQ=255)

                        tGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcg                                           >  1:3792800/1‑93 (MQ=255)

                         gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          <  2:1116035/93‑1 (MQ=255)

                           aaGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCaa                                        >  2:5906254/1‑93 (MQ=255)

                           aaGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCaa                                        >  1:2671661/1‑93 (MQ=255)

                            aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAAt                                       <  2:202744/93‑1 (MQ=255)

                            aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAAt                                       >  1:5265748/1‑93 (MQ=255)

                            aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGCTTTGGCGCAAt                                       >  1:2907783/1‑93 (MQ=255)

                             ggAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATg                                      >  2:6070675/1‑93 (MQ=255)

                              gAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGc                                     <  2:300432/93‑1 (MQ=255)

                               aaTGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCt                                    >  1:5880031/1‑93 (MQ=255)

                               aaTGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCt                                    <  1:908977/93‑1 (MQ=255)

                               aaTGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCt                                    >  1:5743063/1‑93 (MQ=255)

                                 tGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTgg                                  >  1:4337722/1‑93 (MQ=255)

                                 tGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTgg                                  <  2:3726184/93‑1 (MQ=255)

                                 tGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTgg                                  <  2:305181/93‑1 (MQ=255)

                                  gCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTggg                                 <  1:809704/93‑1 (MQ=255)

                                   ccGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGc                                <  2:671089/93‑1 (MQ=255)

                                   ccGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGc                                <  1:543751/93‑1 (MQ=255)

                                    cGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCa                               <  1:5407680/93‑1 (MQ=255)

                                     gCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaa                              <  1:2066576/93‑1 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCTTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  2:3876986/93‑1 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            >  2:5207606/1‑93 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  1:61911/93‑1 (MQ=255)

                                       tGGATAAAGTGATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  1:4198202/93‑1 (MQ=255)

                                        ggATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAAt                           >  2:5846705/1‑93 (MQ=255)

                                         gATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATg                          >  2:1870955/1‑93 (MQ=255)

                                           tAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCt                        >  2:1237409/1‑93 (MQ=255)

                                            aaaGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTg                       <  2:5451497/93‑1 (MQ=255)

                                              aGTTATTGTCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGc                     <  2:913792/93‑1 (MQ=255)

                                              aGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGc                     <  2:2790267/93‑1 (MQ=255)

                                               gTTATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCa                    >  1:2966806/1‑93 (MQ=255)

                                                ttATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAg                   >  1:1422310/1‑93 (MQ=255)

                                                ttATTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAg                   <  1:3962025/93‑1 (MQ=255)

                                                  aTTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGAc                 >  2:3600013/1‑93 (MQ=255)

                                                  aTTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGAc                 <  1:762071/93‑1 (MQ=255)

                                                  aTTGGCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGAc                 <  1:1870241/93‑1 (MQ=255)

                                                     ggCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGc              <  2:4864766/93‑1 (MQ=255)

                                                     ggCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGc              >  2:3334442/1‑93 (MQ=255)

                                                     ggCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGc              <  1:3848102/93‑1 (MQ=255)

                                                     ggCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGc              <  2:5181546/93‑1 (MQ=255)

                                                     ggCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGc              <  2:1561299/93‑1 (MQ=255)

                                                      gCTCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCg             <  1:1537407/93‑1 (MQ=255)

                                                        tCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGt           <  2:2397429/93‑1 (MQ=255)

                                                        tCCATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGt           <  2:5557625/93‑1 (MQ=255)

                                                        cccATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGt           <  1:5005749/92‑1 (MQ=255)

                                                         ccATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          <  1:1601169/93‑1 (MQ=255)

                                                         ccATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          <  1:4249307/93‑1 (MQ=255)

                                                         ccATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          >  1:4466493/1‑93 (MQ=255)

                                                         ccAGCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          <  2:4147349/93‑1 (MQ=255)

                                                          cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         <  1:1236413/93‑1 (MQ=255)

                                                          cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         <  2:5097941/93‑1 (MQ=255)

                                                          cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         <  2:4836349/93‑1 (MQ=255)

                                                          cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         >  2:2820062/1‑93 (MQ=255)

                                                          cATCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTgg         >  1:2033017/1‑93 (MQ=255)

                                                           aTCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgc        >  2:2452206/1‑93 (MQ=255)

                                                           aTCAAAGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACGGCGGTGgc        <  1:6269455/93‑1 (MQ=255)

                                                              aaaGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGca     >  1:4171115/1‑93 (MQ=255)

                                                                aGCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGcaca   >  1:4879098/1‑93 (MQ=255)

                                                                aGCCGGTGTCGGC‑GGAACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGcaca   >  2:105770/1‑93 (MQ=255)

                                                                 gCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACaa  <  2:2183207/93‑1 (MQ=255)

                                                                 gCCGGTGTCGGCGGG‑ACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACaa  <  1:1986708/93‑1 (MQ=255)

TCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTC‑GC‑GG‑ACG‑TCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAA  >  NC_000913/3544283‑3544437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`