Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,005,601 +C coding (237/282 nt) b4568 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,005,6001.C99.4% 620.4 / ‑3.7 177coding (236/282 nt)b4568hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base C (72/104);  total (72/105)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 200 total aligned reads displayed.

GTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG  >  NC_000913/4005509‑4005687
                                                                                              |                                                                                       
gTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGc                                                                                        <  2:5128016/93‑1 (MQ=255)
gTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGc                                                                                        >  2:6220218/1‑93 (MQ=255)
 tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcc                                                                                       <  1:4341735/93‑2 (MQ=255)
 tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcc                                                                                       <  2:4824550/93‑2 (MQ=255)
 tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcc                                                                                       <  2:4272330/93‑2 (MQ=255)
  aaTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcct                                                                                      <  1:877146/93‑3 (MQ=255)
  aaTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcct                                                                                      >  2:4059879/1‑91 (MQ=255)
  aaTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcct                                                                                      <  2:3878129/93‑3 (MQ=255)
   aTGGTTTGGGCTGGGATTGCGCTGCTTGGACTGCATTTGATTATCGAAAAAATGGCGTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctg                                                                                     >  2:349541/1‑90 (MQ=255)
    tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGACCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    <  2:4706240/93‑5 (MQ=255)
       tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                  >  2:1105723/1‑93 (MQ=255)
         tGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtctc                                                                                <  1:2483505/93‑1 (MQ=255)
          gggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATctct                                                                               <  1:2104830/93‑1 (MQ=255)
           ggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctg                                                                              <  1:362958/93‑1 (MQ=255)
           ggCGGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctg                                                                              <  1:2663562/93‑1 (MQ=255)
            gCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATTTctgt                                                                             >  1:6414844/1‑92 (MQ=255)
            gCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctgc                                                                             <  2:3325162/93‑1 (MQ=255)
             cTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctgct                                                                            <  1:4941856/93‑1 (MQ=255)
             cTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctgct                                                                            >  1:1008699/1‑93 (MQ=255)
               gggATTGCGCTGCTTGGCCTGGATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTgg                                                                          >  1:4090062/1‑93 (MQ=255)
                 gATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAt                                                                        <  1:262712/93‑1 (MQ=255)
                  aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATg                                                                       <  1:6366092/93‑1 (MQ=255)
                   ttGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATgg                                                                      >  1:3346873/1‑93 (MQ=255)
                    tGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATggg                                                                     <  2:3116908/93‑1 (MQ=255)
                     gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGt                                                                    >  2:6106018/1‑93 (MQ=255)
                     gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGt                                                                    <  1:1281989/93‑1 (MQ=255)
                     gcgcTGCTTGGCCTGCATTTGACTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGGGTCCTGAATCTCTGCTGGATGGGt                                                                    >  1:3103618/1‑93 (MQ=255)
                      cgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGtt                                                                   <  1:3189973/93‑1 (MQ=255)
                       gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTa                                                                  >  2:437818/1‑93 (MQ=255)
                       gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTa                                                                  >  1:539452/1‑93 (MQ=255)
                       gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTa                                                                  <  2:2170493/93‑1 (MQ=255)
                         tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTAcc                                                                >  1:4691199/1‑93 (MQ=255)
                          tctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                               <  2:1899987/92‑1 (MQ=255)
                          gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  2:1481203/1‑93 (MQ=255)
                          gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  2:1853606/1‑93 (MQ=255)
                          gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  2:5653177/1‑93 (MQ=255)
                          gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  1:3298422/1‑93 (MQ=255)
                           ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAg                                                              >  1:5970634/1‑93 (MQ=255)
                            ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             <  2:6130028/93‑1 (MQ=255)
                             tGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGAt                                                            >  1:5499455/1‑93 (MQ=255)
                              ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                           <  1:791689/93‑1 (MQ=255)
                                 cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTa                                                        >  2:1604210/1‑93 (MQ=255)
                                 cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTa                                                        >  2:4409424/1‑93 (MQ=255)
                                  tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                       <  1:3889164/93‑1 (MQ=255)
                                  tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                       >  1:3034600/1‑93 (MQ=255)
                                    cATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgt                                                     <  2:4977936/93‑1 (MQ=255)
                                     aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                    <  1:3591051/93‑1 (MQ=255)
                                     aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                    <  2:1229841/93‑1 (MQ=255)
                                      tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                   <  1:2772400/93‑1 (MQ=255)
                                       ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggt                                                  <  1:5671463/93‑1 (MQ=255)
                                        tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                                 <  2:3346281/93‑1 (MQ=255)
                                        tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGAGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                                 >  2:2400930/1‑93 (MQ=255)
                                         gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                >  1:1370405/1‑93 (MQ=255)
                                          aTTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                                               >  1:2287190/1‑93 (MQ=255)
                                           ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                                              <  1:4059879/93‑1 (MQ=255)
                                           ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                                              <  1:3778214/93‑1 (MQ=255)
                                            tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                             >  2:3039411/1‑93 (MQ=255)
                                            tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                             >  1:1634409/1‑93 (MQ=255)
                                            tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                             <  2:1883554/93‑1 (MQ=255)
                                               cGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaa                                          <  2:2945271/93‑1 (MQ=255)
                                                  aaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaa                                       >  2:641344/1‑93 (MQ=255)
                                                  aaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaa                                       >  1:5087266/1‑93 (MQ=255)
                                                    aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                     <  1:2936597/93‑1 (MQ=255)
                                                    aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                     >  1:1366123/1‑93 (MQ=255)
                                                    aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGGATCTCTGCTGGATGGGTTAGCAGGTGCTTCGTGGTGCACTGAAAagag                                     >  1:2360515/1‑93 (MQ=255)
                                                     aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                    <  1:3991339/93‑1 (MQ=255)
                                                     aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                    >  2:5927007/1‑93 (MQ=255)
                                                     aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                    <  2:544595/93‑1 (MQ=255)
                                                          gcTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                               <  2:527640/92‑1 (MQ=255)
                                                           cTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                              <  2:876830/93‑1 (MQ=255)
                                                           cTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                              >  1:1854127/1‑93 (MQ=255)
                                                            tGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                             <  1:1322486/93‑1 (MQ=255)
                                                            tGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                             <  2:3808997/93‑1 (MQ=255)
                                                             ggCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                            >  2:2086484/1‑93 (MQ=255)
                                                              gCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                           <  1:3271235/93‑1 (MQ=255)
                                                               cTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt                          <  1:1204641/93‑1 (MQ=255)
                                                                tGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTg                         >  1:2425628/1‑93 (MQ=255)
                                                                tGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTg                         >  1:1618641/1‑93 (MQ=255)
                                                                 gCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc                        >  2:6423523/1‑93 (MQ=255)
                                                                    tgcGCTGATTATGGTGGGCGGTCGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     <  2:2657760/91‑1 (MQ=255)
                                                                    tACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     <  1:691083/93‑1 (MQ=255)
                                                                     aCGTTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                    <  1:4821343/93‑1 (MQ=255)
                                                                     aCGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                    <  1:5821939/93‑1 (MQ=255)
                                                                     aCGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                    <  1:2219099/93‑1 (MQ=255)
                                                                      cGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTg                   <  1:3705176/93‑1 (MQ=255)
                                                                        cTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcg                 >  2:4185986/1‑93 (MQ=255)
                                                                        cTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcg                 >  2:653234/1‑93 (MQ=255)
                                                                         tGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcgc                >  1:981794/1‑93 (MQ=255)
                                                                              aTGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg           <  1:6205976/93‑1 (MQ=255)
                                                                              aTGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg           <  1:1534039/93‑1 (MQ=255)
                                                                               tggtgcGCGGTCGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg          <  1:3235173/93‑1 (MQ=255)
                                                                                ggtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGt         <  1:5172710/93‑1 (MQ=255)
                                                                                ggtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGACGCGGTTTCTGCACCCGCGCCACAGGt         <  1:5879318/93‑1 (MQ=255)
                                                                                 gtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc        <  1:3370327/93‑1 (MQ=255)
                                                                                  tggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCg       <  2:4514608/93‑1 (MQ=255)
                                                                                   gggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa      >  2:2927793/1‑93 (MQ=255)
                                                                                   gggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa      >  2:1501074/1‑93 (MQ=255)
                                                                                     gCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGc    <  2:5787772/93‑1 (MQ=255)
                                                                                      cGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCt   <  1:2590528/93‑1 (MQ=255)
                                                                                       ggTGGCCTGTATCTCTGCTGGATGGGTTCCCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg  <  1:1114300/93‑1 (MQ=255)
                                                                                              |                                                                                       
GTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG  >  NC_000913/4005509‑4005687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: