Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 847,139 G→T A30E (GCG→GAG)  glnH ← periplasmic glutamine‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913847,1390GT100.0% 810.9 / NA 207A30E (GCG→GAG) glnHperiplasmic glutamine‑binding protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (110/97);  total (110/97)

Only 100 of 212 total aligned reads displayed.

TCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATA  >  NC_000913/847049‑847228
                                                                                          |                                                                                         
     aGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAAc                                                                                    >  1:3438202/1‑93 (MQ=255)
     aGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAAc                                                                                    <  2:3826366/93‑1 (MQ=255)
      gCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACt                                                                                   <  1:2076412/93‑1 (MQ=255)
      gCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACt                                                                                   >  2:4063066/1‑93 (MQ=255)
        gATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTaa                                                                                 <  1:5680821/93‑1 (MQ=255)
        gATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTaa                                                                                 <  2:4297615/93‑1 (MQ=255)
         aTGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAt                                                                                <  2:5328014/93‑1 (MQ=255)
         aTGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAt                                                                                <  1:3101673/93‑1 (MQ=255)
          tGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAtt                                                                               <  2:1375121/93‑1 (MQ=255)
          tGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAtt                                                                               >  2:2580321/1‑93 (MQ=255)
           ggCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAttt                                                                              <  1:1145482/93‑1 (MQ=255)
            gCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAtttt                                                                             <  2:3948068/93‑1 (MQ=255)
               gCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAttttttt                                                                          >  1:1841050/1‑92 (MQ=255)
               gCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTa                                                                          <  2:322291/93‑1 (MQ=255)
                 ccACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATc                                                                        >  2:5349928/1‑93 (MQ=255)
                 ccACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAAGCGGTATCCGTCTCCACAACTAATTTTTTATc                                                                        >  1:2592244/1‑93 (MQ=255)
                  cacaGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATcc                                                                       <  1:580506/93‑1 (MQ=255)
                  cacaGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATcc                                                                       <  2:2462208/93‑1 (MQ=255)
                   acaGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCcg                                                                      >  1:4980302/1‑93 (MQ=255)
                    caGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCcgc                                                                     <  2:3236613/93‑1 (MQ=255)
                     aGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCcgcg                                                                    >  1:4769433/1‑93 (MQ=255)
                      gATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCgg                                                                   >  1:3889947/1‑93 (MQ=255)
                      gATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCgg                                                                   >  1:1661304/1‑93 (MQ=255)
                        tCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCa                                                                 >  2:300757/1‑93 (MQ=255)
                         cAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCAt                                                                >  1:3172494/1‑93 (MQ=255)
                         cAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCAt                                                                <  1:1386712/93‑1 (MQ=255)
                          aaCGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATg                                                               <  2:5781748/93‑1 (MQ=255)
                            cGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATgag                                                             <  1:2132713/93‑1 (MQ=255)
                               cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGACGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag                                                          >  2:4173026/1‑93 (MQ=255)
                               cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag                                                          <  2:4793801/93‑1 (MQ=255)
                               cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag                                                          <  2:2837572/93‑1 (MQ=255)
                               cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag                                                          <  1:6146318/93‑1 (MQ=255)
                               cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGCATCCGTCTCGACAACTAATTTTTTATCCGCGGGATGagaag                                                          >  1:6006409/1‑93 (MQ=255)
                                   gCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAAc                                                      >  1:4535035/1‑93 (MQ=255)
                                    cccACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAAcc                                                     >  2:5729410/1‑93 (MQ=255)
                                     ccACATATTTATCGCCCTGTTTAAATTCATACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCg                                                    <  1:6354367/93‑1 (MQ=255)
                                     ccACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCg                                                    >  1:4452791/1‑93 (MQ=255)
                                     ccACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCg                                                    >  1:1887654/1‑93 (MQ=255)
                                      cacaTATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGc                                                   >  1:2275116/1‑93 (MQ=255)
                                         atatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaa                                                >  1:3814720/1‑93 (MQ=255)
                                         atatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaa                                                >  1:2797568/1‑93 (MQ=255)
                                          tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa                                               >  2:3633658/1‑93 (MQ=255)
                                          tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa                                               >  2:3596878/1‑93 (MQ=255)
                                          tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa                                               <  2:696817/93‑1 (MQ=255)
                                          tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa                                               <  1:3706576/93‑1 (MQ=255)
                                            tttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGc                                             <  2:290487/93‑1 (MQ=255)
                                             ttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGcc                                            >  2:4415925/1‑93 (MQ=255)
                                             ttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGcc                                            <  1:5384129/93‑1 (MQ=255)
                                             ttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGcc                                            <  2:4328110/93‑1 (MQ=255)
                                              tATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCa                                           <  2:140719/93‑1 (MQ=255)
                                               aTCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAg                                          <  2:6062918/93‑1 (MQ=255)
                                               aTCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAAAAACAACAAAAACCAg                                          >  1:4595516/1‑93 (MQ=255)
                                                tCGCCTTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAgg                                         <  1:1510750/93‑1 (MQ=255)
                                                tCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAgg                                         <  2:3736021/93‑1 (MQ=255)
                                                 cGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAggg                                        <  1:1466085/93‑1 (MQ=255)
                                                  gCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGt                                       <  2:6356418/93‑1 (MQ=255)
                                                     cTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAg                                    >  2:2103360/1‑93 (MQ=255)
                                                     cTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGACTGAGAAGAAACCGCACAAGCCAGGGTCAg                                    >  1:5485862/1‑93 (MQ=255)
                                                        tttAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGc                                 <  1:3338586/93‑1 (MQ=255)
                                                           aaaTTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGc                              >  1:4104982/1‑93 (MQ=255)
                                                             aTTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCa                            <  2:4486170/93‑1 (MQ=255)
                                                             aTTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCa                            <  2:5627281/93‑1 (MQ=255)
                                                              ttCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAg                           <  2:1916525/93‑1 (MQ=255)
                                                               tCAAACGGAACGAAGGCGGTAGCCGTCCCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGt                          <  1:3763712/93‑1 (MQ=255)
                                                                cAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTg                         >  2:4917573/1‑93 (MQ=255)
                                                                cAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTg                         <  1:4010543/93‑1 (MQ=255)
                                                                 aaaCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGa                        >  2:4515830/1‑93 (MQ=255)
                                                                   aCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGaaa                      >  1:6061704/1‑93 (MQ=255)
                                                                   aCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGaaa                      >  1:6429217/1‑93 (MQ=255)
                                                                   aCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGaaa                      <  2:5508904/93‑1 (MQ=255)
                                                                    cGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAAc                     <  1:4216790/93‑1 (MQ=255)
                                                                    cGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAAc                     <  2:3541171/93‑1 (MQ=255)
                                                                     ggAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACt                    <  2:1935961/93‑1 (MQ=255)
                                                                     ggAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACt                    <  2:805592/93‑1 (MQ=255)
                                                                      gAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACtt                   >  1:3282913/1‑93 (MQ=255)
                                                                      gAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACtt                   >  2:1885117/1‑93 (MQ=255)
                                                                       aaCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACttt                  <  2:3364429/93‑1 (MQ=255)
                                                                       aaCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACttt                  <  2:2206658/93‑1 (MQ=255)
                                                                       aaCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACttt                  <  1:4897333/93‑1 (MQ=255)
                                                                        aCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACtttt                 >  1:2751180/1‑93 (MQ=255)
                                                                          gAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTaa               >  2:5488272/1‑93 (MQ=255)
                                                                           aaGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAt              >  2:616128/1‑93 (MQ=255)
                                                                           aaGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAt              <  1:1241289/93‑1 (MQ=255)
                                                                           aaGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAt              >  1:3594331/1‑93 (MQ=255)
                                                                            aGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATa             >  2:242280/1‑93 (MQ=255)
                                                                             ggCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATAc            >  1:4336476/1‑93 (MQ=255)
                                                                                ggTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGa         >  1:232507/1‑93 (MQ=255)
                                                                                 gTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGAc        >  2:2547438/1‑93 (MQ=255)
                                                                                 gTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGAc        >  1:2670066/1‑93 (MQ=255)
                                                                                    tCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTc     >  1:56189/1‑93 (MQ=255)
                                                                                    tCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTc     >  1:325111/1‑93 (MQ=255)
                                                                                    tCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTc     >  1:2481031/1‑93 (MQ=255)
                                                                                     ccGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCa    <  1:1965148/93‑1 (MQ=255)
                                                                                     ccGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCa    <  2:18089/93‑1 (MQ=255)
                                                                                     ccGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCa    <  2:1090200/93‑1 (MQ=255)
                                                                                      cGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCAt   <  2:857647/93‑1 (MQ=255)
                                                                                       gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa  >  1:3027956/1‑93 (MQ=255)
                                                                                       gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa  <  1:4749693/93‑1 (MQ=255)
                                                                                       gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa  <  2:46884/93‑1 (MQ=255)
                                                                                       gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa  <  2:4446694/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATA  >  NC_000913/847049‑847228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: