BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	881,233	T→C	Y242C (TAC→TGC)	deoR ←	DeoR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	881,233	0	T	C	100.0%	696.3 / NA	198	Y242C (TAC→TGC)	deoR	DeoR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/107); total (91/107)

Only 100 of 203 total aligned reads displayed.

GTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCA  >  NC_000913/881143‑881322

gTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCAc                                                                                         >  2:4928297/1‑93 (MQ=255)

gTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCAc                                                                                         <  1:1072623/93‑1 (MQ=255)

 ttCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACt                                                                                        <  2:1683646/93‑1 (MQ=255)

 ttCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACt                                                                                        >  1:1797660/1‑93 (MQ=255)

  tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACtt                                                                                       <  2:1628858/93‑1 (MQ=255)

  tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACtt                                                                                       <  2:6387029/93‑1 (MQ=255)

  tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACtt                                                                                       >  2:5829015/1‑93 (MQ=255)

  tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACtt                                                                                       <  1:1987856/93‑1 (MQ=255)

   ctctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTc                                                                                      <  2:2168511/93‑1 (MQ=255)

   ctctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTc                                                                                      >  2:158716/1‑93 (MQ=255)

   ctctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTc                                                                                      <  2:5665736/93‑1 (MQ=255)

    tctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTca                                                                                     >  2:1337404/1‑93 (MQ=255)

    tctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTca                                                                                     >  1:5233599/1‑93 (MQ=255)

     ctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTcac                                                                                    >  2:560949/1‑93 (MQ=255)

      ttAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTcaca                                                                                   <  1:382631/93‑1 (MQ=255)

      ttAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTcaca                                                                                   <  1:2050607/93‑1 (MQ=255)

      ttAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTcaca                                                                                   >  2:602239/1‑93 (MQ=255)

        aaTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATa                                                                                 <  2:1098258/93‑1 (MQ=255)

         aTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATAc                                                                                >  1:6192739/1‑93 (MQ=255)

          tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACt                                                                               <  1:1374936/93‑1 (MQ=255)

            ttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCa                                                                             <  1:2660946/93‑1 (MQ=255)

             tctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCAt                                                                            >  1:3232378/1‑93 (MQ=255)

              ctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATc                                                                           <  1:5073347/93‑1 (MQ=255)

              ctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATc                                                                           <  1:2216104/93‑1 (MQ=255)

               tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCt                                                                          <  2:2906298/93‑1 (MQ=255)

               tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCt                                                                          >  1:3771968/1‑93 (MQ=255)

                gATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCtt                                                                         >  1:1383565/1‑93 (MQ=255)

                 aTAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTc                                                                        <  2:3273228/93‑1 (MQ=255)

                 aTAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTc                                                                        >  2:6146323/1‑93 (MQ=255)

                   aaCCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCg                                                                      >  2:4693863/1‑93 (MQ=255)

                   aaCCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCg                                                                      >  1:1284158/1‑93 (MQ=255)

                    aCCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCgg                                                                     <  2:5695567/93‑1 (MQ=255)

                    aCCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCgg                                                                     <  1:5977669/93‑1 (MQ=255)

                     ccGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCggg                                                                    <  2:5370229/93‑1 (MQ=255)

                     ccGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCggg                                                                    <  2:929219/93‑1 (MQ=255)

                      cGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGc                                                                   <  1:5347169/93‑1 (MQ=255)

                       ggATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGca                                                                  <  1:305542/93‑1 (MQ=255)

                         aTGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGcaac                                                                <  1:4121273/93‑1 (MQ=255)

                            gcgcGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAAt                                                             <  2:5424818/93‑1 (MQ=255)

                            gcgcGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAAt                                                             <  1:6463604/93‑1 (MQ=255)

                              gcgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCg                                                           >  2:3859391/1‑93 (MQ=255)

                               cgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGc                                                          <  2:2395394/93‑1 (MQ=255)

                                 aaaCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTc                                                        <  1:1589819/93‑1 (MQ=255)

                                  aaCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTca                                                       >  1:1512580/1‑93 (MQ=255)

                                   aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTcac                                                      >  2:2791077/1‑93 (MQ=255)

                                    cGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTcacc                                                     <  1:2817629/93‑1 (MQ=255)

                                    cGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTcacc                                                     <  1:4890915/93‑1 (MQ=255)

                                        aTCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACaa                                                 >  2:3636255/1‑93 (MQ=255)

                                        aTCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACaa                                                 >  1:4374656/1‑93 (MQ=255)

                                          ccGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAata                                               >  1:5643895/1‑93 (MQ=255)

                                           cGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAatat                                              <  1:234790/93‑1 (MQ=255)

                                           cGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAatat                                              >  1:4724080/1‑93 (MQ=255)

                                              ttATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCaa                                           >  2:815297/1‑93 (MQ=255)

                                               tataCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCaaa                                          <  2:88890/93‑1 (MQ=255)

                                                ataCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAg                                         <  2:324092/93‑1 (MQ=255)

                                                 taCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGc                                        >  1:3639239/1‑93 (MQ=255)

                                                 taCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGc                                        <  2:533357/93‑1 (MQ=255)

                                                    gTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGtt                                     <  2:4792685/93‑1 (MQ=255)

                                                    gTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGtt                                     >  2:6424487/1‑93 (MQ=255)

                                                    gTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGtt                                     <  1:673619/93‑1 (MQ=255)

                                                     tCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATCCTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGttt                                    <  1:3197401/93‑1 (MQ=255)

                                                     tCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGttt                                    <  2:5118086/93‑1 (MQ=255)

                                                      cATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTc                                   <  2:2363602/93‑1 (MQ=255)

                                                      cATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTc                                   >  1:290236/1‑93 (MQ=255)

                                                      cATTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTc                                   <  2:403850/93‑1 (MQ=255)

                                                       aTTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCa                                  >  1:270071/1‑93 (MQ=255)

                                                       aTTAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCa                                  <  1:2284028/93‑1 (MQ=255)

                                                        ttAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAg                                 >  1:5541552/1‑93 (MQ=255)

                                                        ttAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAg                                 >  1:5326460/1‑93 (MQ=255)

                                                         tAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAgg                                >  2:3311193/1‑93 (MQ=255)

                                                         tAATACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAgg                                <  1:3961893/93‑1 (MQ=255)

                                                           aTACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTc                              >  2:2676781/1‑93 (MQ=255)

                                                           aTACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTc                              <  1:3495559/93‑1 (MQ=255)

                                                           aTACATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTc                              >  2:5065235/1‑93 (MQ=255)

                                                             aCATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCAc                            >  2:4258235/1‑93 (MQ=255)

                                                              cATCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCAcc                           >  1:1858260/1‑93 (MQ=255)

                                                               aTCAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCAccc                          >  2:2633523/1‑93 (MQ=255)

                                                                 cAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCAt                        >  1:222915/1‑93 (MQ=255)

                                                                 cAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCAt                        <  2:3048462/93‑1 (MQ=255)

                                                                 cAACTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCAt                        <  1:4416979/93‑1 (MQ=255)

                                                                  aaCTTAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATg                       >  1:1658635/1‑93 (MQ=255)

                                                                     ttAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATgcgc                    >  2:4417567/1‑93 (MQ=255)

                                                                     ttAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATgcgc                    >  2:1435708/1‑93 (MQ=255)

                                                                      tAATGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATgcgcg                   <  2:2486765/93‑1 (MQ=255)

                                                                        aTGCGCTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGcc                 <  2:1861954/93‑1 (MQ=255)

                                                                          gcgcTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCgg               >  1:2477637/1‑93 (MQ=255)

                                                                           cgcTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGa              <  1:1730252/93‑1 (MQ=255)

                                                                            gcTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGAc             <  2:4858025/93‑1 (MQ=255)

                                                                            gcTGCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGAc             >  1:864780/1‑93 (MQ=255)

                                                                               gCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCa          <  1:4829295/93‑1 (MQ=255)

                                                                               gCGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCa          <  1:477/93‑1 (MQ=255)

                                                                                cGTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCAc         >  2:4963255/1‑93 (MQ=255)

                                                                                 gTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCAcc        >  1:3397537/1‑93 (MQ=255)

                                                                                 gTCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCAcc        <  1:5067502/93‑1 (MQ=255)

                                                                                  tCTGCGCGCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCt       >  2:2781469/1‑93 (MQ=255)

                                                                                      cgcgCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGcc   <  1:1902765/93‑1 (MQ=255)

                                                                                      cgcgCACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGcc   >  2:785864/1‑93 (MQ=255)

                                                                                       gcgcACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCa  <  1:575069/93‑1 (MQ=255)

                                                                                       gcgcACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCa  >  2:3911706/1‑93 (MQ=255)

                                                                                       gcgcACTGCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCa  <  2:3523739/93‑1 (MQ=255)

GTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAGGTCACCCATGCGCGCCGGACGCACCTTGCCA  >  NC_000913/881143‑881322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`