BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	969,158	C→T	R183C (CGC→TGC)	ycaQ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	969,158	0	C	T	100.0%	834.8 / NA	218	R183C (CGC→TGC)	ycaQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (110/108); total (110/108)

Only 100 of 233 total aligned reads displayed.

GGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTG  >  NC_000913/969068‑969247

ggCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGGAAGGTGATGGTGATTGAACGGCGCAACTTCCAgtgc                                                                                         >  1:4611546/1‑93 (MQ=255)

ggCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAgtgc                                                                                         >  1:5957631/1‑93 (MQ=255)

 gCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGtgcg                                                                                        >  1:3582235/1‑93 (MQ=255)

 gCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGGTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGAGCAACTTCCAGtgcg                                                                                        >  1:3051268/1‑93 (MQ=255)

   tggtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTATTGCCGGAAAGGTGATGGTGATTGAACGGCGCGACTTCCCGTGCGtt                                                                                      >  1:5207438/1‑93 (MQ=255)

   tggtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGtt                                                                                      >  1:3857518/1‑93 (MQ=255)

    ggtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGttt                                                                                     <  1:1702270/93‑1 (MQ=255)

    ggtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGttt                                                                                     <  1:4946141/93‑1 (MQ=255)

     gtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTa                                                                                    <  2:5001268/93‑1 (MQ=255)

     gtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTa                                                                                    <  2:5827864/93‑1 (MQ=255)

          aaTGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGAtt                                                                               <  1:3538264/93‑1 (MQ=255)

           aTGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGAttt                                                                              >  2:1222341/1‑93 (MQ=255)

           aTGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGAttt                                                                              >  2:2586853/1‑93 (MQ=255)

           aTGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATCGAACGGCGCAACTTCCAGTGCGTTTATGAttt                                                                              >  2:3007730/1‑93 (MQ=255)

            tGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTa                                                                             <  1:4773717/93‑1 (MQ=255)

             ggAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTaa                                                                            >  2:1097088/1‑93 (MQ=255)

              gAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAc                                                                           >  2:175816/1‑93 (MQ=255)

              gAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAc                                                                           >  2:1751516/1‑93 (MQ=255)

              gAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGAGCAACTTCCAGTGCGTTTATGATTTAAc                                                                           >  2:6212269/1‑93 (MQ=255)

               aaGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAcc                                                                          >  1:4402213/1‑93 (MQ=255)

               aaGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAcc                                                                          >  2:875406/1‑93 (MQ=255)

                aGCCGCATAAACGGCATCTGGGAGGTTTATTTACTGCCGGGAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAccc                                                                         >  1:655057/1‑93 (MQ=255)

                aGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAccc                                                                         <  1:4060844/93‑1 (MQ=255)

                aGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAccc                                                                         <  1:2830895/93‑1 (MQ=255)

                 gCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCa                                                                        >  1:2344266/1‑93 (MQ=255)

                   cGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCAcc                                                                      >  1:953744/1‑93 (MQ=255)

                   cGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCAcc                                                                      >  1:2381869/1‑93 (MQ=255)

                      aTAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCgtg                                                                   >  1:3319825/1‑93 (MQ=255)

                       tAAACGGCATCTGGAAGGTTTATTTACTGCTGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCgtgt                                                                  <  2:3274557/93‑1 (MQ=255)

                       tAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCgtgt                                                                  >  1:733127/1‑93 (MQ=255)

                         aaCGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCa                                                                >  1:376595/1‑93 (MQ=255)

                            ggCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGc                                                             <  1:4004332/93‑1 (MQ=255)

                            ggCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGc                                                             >  1:6446660/1‑93 (MQ=255)

                            ggCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGc                                                             >  1:5809868/1‑93 (MQ=255)

                             gCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGcc                                                            >  1:6416039/1‑93 (MQ=255)

                              cATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCt                                                           >  2:1596590/1‑93 (MQ=255)

                              cATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCt                                                           >  2:5368868/1‑93 (MQ=255)

                              cATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCt                                                           <  1:2670960/93‑1 (MQ=255)

                               aTCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTg                                                          <  2:4898689/93‑1 (MQ=255)

                                tCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                         >  1:226294/1‑93 (MQ=255)

                                tCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                         >  2:2006007/1‑93 (MQ=255)

                                  tGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACt                                                       >  1:6007891/1‑93 (MQ=255)

                                   ggAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTg                                                      >  1:142016/1‑93 (MQ=255)

                                   ggAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTg                                                      >  2:1904684/1‑93 (MQ=255)

                                   ggAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTg                                                      <  1:2028901/93‑1 (MQ=255)

                                     aaGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTggg                                                    >  1:4506055/1‑93 (MQ=255)

                                       ggTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgat                                                  <  2:672370/93‑1 (MQ=255)

                                         tttatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatga                                                <  1:5691383/93‑1 (MQ=255)

                                         tttatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatga                                                >  2:2489315/1‑93 (MQ=255)

                                           tatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                              <  2:2925552/93‑1 (MQ=255)

                                           tatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                              <  1:4718418/93‑1 (MQ=255)

                                           tatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                              <  1:5582458/93‑1 (MQ=255)

                                           tatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                              <  2:5843294/93‑1 (MQ=255)

                                             tttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAg                                            >  1:2135805/1‑93 (MQ=255)

                                             tttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAg                                            >  1:3189486/1‑93 (MQ=255)

                                               taCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgcg                                          <  1:1458573/93‑1 (MQ=255)

                                                aCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgcgc                                         <  1:5324340/93‑1 (MQ=255)

                                                 cTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGcgcg                                        >  2:2099827/1‑93 (MQ=255)

                                                   gCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAt                                      <  2:339756/93‑1 (MQ=255)

                                                    ccGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtc                                     <  2:919524/93‑1 (MQ=255)

                                                     cGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtct                                    <  1:6053968/93‑1 (MQ=255)

                                                     cGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtct                                    <  1:5236579/93‑1 (MQ=255)

                                                     cGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtct                                    <  1:428832/93‑1 (MQ=255)

                                                      ggAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtctc                                   >  2:1452948/1‑93 (MQ=255)

                                                      ggAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtctc                                   >  2:1353676/1‑93 (MQ=255)

                                                      ggAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtctc                                   >  2:815306/1‑93 (MQ=255)

                                                      ggAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtctc                                   <  2:4752233/93‑1 (MQ=255)

                                                       gAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCg                                  >  1:6174542/1‑93 (MQ=255)

                                                       gAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCg                                  >  2:4674378/1‑93 (MQ=255)

                                                        aaaGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGt                                 <  2:1729386/93‑1 (MQ=255)

                                                        aaaGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGt                                 <  1:1380853/93‑1 (MQ=255)

                                                        aaaGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGt                                 <  2:3684792/93‑1 (MQ=255)

                                                         aaGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGtt                                <  2:5639228/93‑1 (MQ=255)

                                                         aaGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGtt                                >  2:401481/1‑93 (MQ=255)

                                                          aGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGttt                               <  2:731541/93‑1 (MQ=255)

                                                            gtgatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCg                             >  2:39181/1‑93 (MQ=255)

                                                                 ggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAAc                        <  2:6418757/93‑1 (MQ=255)

                                                                   tgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAg                      <  2:5134518/93‑1 (MQ=255)

                                                                   tgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAg                      <  1:3636122/93‑1 (MQ=255)

                                                                    gatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGa                     <  1:1009407/93‑1 (MQ=255)

                                                                    gatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATATCGTTTCGCAAACAGa                     >  1:218951/1‑93 (MQ=255)

                                                                     atTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGaa                    <  1:4122236/93‑1 (MQ=255)

                                                                     atTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGaa                    <  1:254694/93‑1 (MQ=255)

                                                                       tGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGc                  <  2:6025041/93‑1 (MQ=255)

                                                                        gAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCa                 <  2:1543467/93‑1 (MQ=255)

                                                                         aaCGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAg                >  2:3967846/1‑93 (MQ=255)

                                                                            ggCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGaaa             >  1:611074/1‑93 (MQ=255)

                                                                             gcgcAACTTCCATTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAat            <  1:3465349/93‑1 (MQ=255)

                                                                               gcAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatca          >  1:1682489/1‑93 (MQ=255)

                                                                                  aCTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAAtcatca       >  2:45174/1‑93 (MQ=255)

                                                                                  aCTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAAtcatca       >  2:5779740/1‑93 (MQ=255)

                                                                                  aCTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAAtcatca       <  2:3560670/93‑1 (MQ=255)

                                                                                   cTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATcatcat      <  2:121218/93‑1 (MQ=255)

                                                                                   cTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATcatcat      <  2:626963/93‑1 (MQ=255)

                                                                                     tCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGc    <  2:2499963/93‑1 (MQ=255)

                                                                                     tCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGc    >  1:5105418/1‑93 (MQ=255)

                                                                                      ccAGTGCGTTTATGATTTACCCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCt   >  1:6303597/1‑93 (MQ=255)

                                                                                      ccAGTGAGTTTATGATTTAACCCACCGTGTAATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCt   <  1:4236177/93‑1 (MQ=255)

                                                                                       cAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTg  >  1:1772588/1‑93 (MQ=255)

                                                                                       cAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTg  >  2:544624/1‑93 (MQ=255)

GGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTG  >  NC_000913/969068‑969247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`