BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,147,697	A→G	N275S (AAC→AGC)	plsX →	PlsX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,147,697	0	A	G	100.0%	784.0 / NA	225	N275S (AAC→AGC)	plsX	PlsX
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/115); total (110/115)

Only 100 of 232 total aligned reads displayed.

TCAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCGG  >  NC_000913/1147608‑1147786

tcAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGccc                                                                                        >  1:4865407/1‑93 (MQ=255)

tcAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGccc                                                                                        <  1:2280229/93‑1 (MQ=255)

tcAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCAACTCAGccc                                                                                        >  1:1883262/1‑93 (MQ=255)

 cAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGcccc                                                                                       <  2:5019758/93‑1 (MQ=255)

 cAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGcccc                                                                                       <  1:1904377/93‑1 (MQ=255)

   gggTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGTTTCAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGccccca                                                                                     >  1:430560/1‑91 (MQ=255)

    ggTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGAc                                                                                    <  2:6353885/93‑1 (MQ=255)

       taaGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAg                                                                                 <  1:356828/92‑1 (MQ=255)

         aGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGta                                                                               <  2:4812225/93‑1 (MQ=255)

         aGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGta                                                                               >  1:3170568/1‑93 (MQ=255)

          gggAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGtat                                                                              >  1:3053683/1‑93 (MQ=255)

             aaaaaaCGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAAc                                                                           <  1:558086/93‑1 (MQ=255)

                aaaCGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGgc                                                                        >  2:5264037/1‑93 (MQ=255)

                aaaCGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGgc                                                                        <  1:1232848/93‑1 (MQ=255)

                 aaCGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAATGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGgcg                                                                       >  2:3434318/1‑93 (MQ=255)

                 aaCGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGgcg                                                                       >  1:6306083/1‑93 (MQ=255)

                   cGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGcc                                                                     <  2:3077200/93‑1 (MQ=255)

                   cGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGcc                                                                     <  1:4077457/93‑1 (MQ=255)

                   cGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGcc                                                                     <  1:110787/93‑1 (MQ=255)

                   cGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGcc                                                                     <  1:1004012/93‑1 (MQ=255)

                    ggTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGTct                                                                    >  1:2077693/1‑93 (MQ=255)

                     gTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctg                                                                   >  1:2317481/1‑93 (MQ=255)

                     gTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctg                                                                   <  2:6006341/93‑1 (MQ=255)

                     gTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctg                                                                   <  2:6087456/93‑1 (MQ=255)

                     gTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctg                                                                   <  2:2910940/93‑1 (MQ=255)

                        gtggtgGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctgtct                                                                >  2:2436614/1‑93 (MQ=255)

                        gtggtgGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctgtct                                                                >  2:2075773/1‑93 (MQ=255)

                         tggtggCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctgtctg                                                               >  1:4680962/1‑93 (MQ=255)

                          ggtggCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCTCCTCAGCCCCGACCAGTATAACGGCGCctgtctgt                                                              <  2:2500381/93‑1 (MQ=255)

                          ggtggCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctgtctgt                                                              <  2:3217089/93‑1 (MQ=255)

                          ggtggCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCctgtctgt                                                              <  2:5961315/93‑1 (MQ=255)

                             ggCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAg                                                           <  2:2268379/93‑1 (MQ=255)

                             ggCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAg                                                           >  1:3871156/1‑93 (MQ=255)

                             ggCTACTGTAATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAg                                                           >  1:4714471/1‑93 (MQ=255)

                               cTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGa                                                         <  1:5014533/93‑1 (MQ=255)

                               cTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGa                                                         >  1:6038393/1‑93 (MQ=255)

                                tACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGAt                                                        >  2:2985906/1‑93 (MQ=255)

                                 aCTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGAtt                                                       <  2:5342090/93‑1 (MQ=255)

                                 aCTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGAtt                                                       <  1:314215/93‑1 (MQ=255)

                                  cTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTg                                                      <  2:1418557/93‑1 (MQ=255)

                                  cTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTg                                                      >  2:4902652/1‑93 (MQ=255)

                                   tGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTgc                                                     <  1:1759243/93‑1 (MQ=255)

                                   tGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTgc                                                     <  1:3456982/93‑1 (MQ=255)

                                      tattaAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGcgcg                                                  <  2:4165625/93‑1 (MQ=255)

                                        ttaAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGc                                                <  1:789406/93‑1 (MQ=255)

                                        ttaAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGc                                                >  2:4130692/1‑93 (MQ=255)

                                        ttaAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGc                                                <  1:3375653/93‑1 (MQ=255)

                                          aaaGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCag                                              >  2:4603683/1‑92 (MQ=255)

                                          aaaGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCAc                                              >  1:3687368/1‑93 (MQ=255)

                                          aaaGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCAc                                              <  2:5477261/93‑1 (MQ=255)

                                           aaGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACg                                             >  2:5441892/1‑93 (MQ=255)

                                           aaGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACg                                             >  2:3582104/1‑93 (MQ=255)

                                             gCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGt                                           <  2:3837678/93‑1 (MQ=255)

                                              cGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTg                                          <  2:2767452/93‑1 (MQ=255)

                                              cGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTg                                          <  2:6465596/93‑1 (MQ=255)

                                               gTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGa                                         <  1:4167398/93‑1 (MQ=255)

                                               gTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGa                                         >  2:2196518/1‑93 (MQ=255)

                                                ttGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGAt                                        <  1:1115519/93‑1 (MQ=255)

                                                ttGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGAt                                        <  1:3939644/93‑1 (MQ=255)

                                                  tgCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATaa                                      >  1:264248/2‑93 (MQ=255)

                                                  ggCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATaa                                      >  1:3960807/1‑93 (MQ=255)

                                                   gCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATaaa                                     <  2:5158975/93‑1 (MQ=255)

                                                   gCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATaaa                                     >  1:5146659/1‑93 (MQ=255)

                                                       cAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGt                                 >  2:5544368/1‑93 (MQ=255)

                                                         aaaGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCa                               <  2:2732428/93‑1 (MQ=255)

                                                         aaaGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCa                               >  2:4667280/1‑93 (MQ=255)

                                                          aaGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCAt                              <  1:4747226/93‑1 (MQ=255)

                                                          aaGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCAt                              <  2:1946145/93‑1 (MQ=255)

                                                          aaGAGCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCAt                              >  1:5757844/1‑93 (MQ=255)

                                                           agagCCTGCCGAGGCGATTCAGTCACCTCAGCCCCGACCAGGATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATg                             >  1:6273468/1‑93 (MQ=255)

                                                           agagCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATg                             >  2:3516407/1‑93 (MQ=255)

                                                           agagCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATg                             >  2:3995397/1‑93 (MQ=255)

                                                            gagCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATgg                            <  1:2116534/93‑1 (MQ=255)

                                                            gagCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATgg                            <  2:4068783/93‑1 (MQ=255)

                                                            gagCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATgg                            <  2:429049/93‑1 (MQ=255)

                                                             agCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGt                           >  1:2928881/1‑93 (MQ=255)

                                                              gCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTg                          <  2:3450546/93‑1 (MQ=255)

                                                              gCCTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTg                          <  2:203432/93‑1 (MQ=255)

                                                               ccTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGc                         <  1:4609400/93‑1 (MQ=255)

                                                                cTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCa                        <  2:1896104/93‑1 (MQ=255)

                                                                cTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCa                        >  2:3323545/1‑93 (MQ=255)

                                                                cTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCa                        >  2:3191335/1‑93 (MQ=255)

                                                                cTGACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCa                        >  2:5031235/1‑93 (MQ=255)

                                                                  taCGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGc                      <  2:778537/92‑1 (MQ=255)

                                                                  gACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGc                      >  2:4451328/1‑93 (MQ=255)

                                                                  gACGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGc                      >  1:1970592/1‑93 (MQ=255)

                                                                   aCGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGcc                     >  2:4720663/1‑93 (MQ=255)

                                                                   aCGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGcc                     >  1:2407006/1‑93 (MQ=255)

                                                                    cGAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCa                    <  2:2695491/93‑1 (MQ=255)

                                                                     gAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCaa                   >  2:1791355/1‑93 (MQ=255)

                                                                     gAGGCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCaa                   <  1:5336063/93‑1 (MQ=255)

                                                                       ggCGATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATc                 <  1:901843/93‑1 (MQ=255)

                                                                          gATTCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGc              <  1:481465/93‑1 (MQ=255)

                                                                            ttCAGTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGa            >  1:6429600/1‑93 (MQ=255)

                                                                                gTCACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCtt        >  1:2590834/1‑93 (MQ=255)

                                                                                  cACCTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCtttt      >  1:5104579/1‑93 (MQ=255)

                                                                                    ccTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGc    <  2:381628/93‑1 (MQ=255)

                                                                                    ccTCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGc    <  2:2377677/93‑1 (MQ=255)

                                                                                      tCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCgg  <  2:1527251/93‑1 (MQ=255)

                                                                                      tCAGCCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCgg  <  2:1244204/93‑1 (MQ=255)

TCAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCGG  >  NC_000913/1147608‑1147786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`