Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,202,176 T→C V78A (GTA→GCA)  b1146 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,202,1760TC100.0% 744.7 / NA 212V78A (GTA→GCA) b1146hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (98/114);  total (98/114)

Only 100 of 216 total aligned reads displayed.

GAAGAATTCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGTACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTGGGACT  >  NC_000913/1202086‑1202265
                                                                                          |                                                                                         
gaagaaTTCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACACTTGCAc                                                                                         >  2:1881033/1‑93 (MQ=255)
  agaaTTCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGAGCGCCGGATGTCATGGATTGTTTTCATAATGAAATTAAAACCCTTGCACCg                                                                                       >  2:5839446/1‑93 (MQ=255)
  agaaTTCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCg                                                                                       <  1:2554999/93‑1 (MQ=255)
   gaaTTCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGt                                                                                      >  1:2352923/1‑93 (MQ=255)
    aaTTCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGtt                                                                                     <  2:4336884/93‑1 (MQ=255)
       tCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAg                                                                                  <  2:2857110/93‑1 (MQ=255)
       tCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAg                                                                                  >  1:3204457/1‑93 (MQ=255)
         ccGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGt                                                                                <  1:4758040/93‑1 (MQ=255)
         ccGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGt                                                                                <  1:238061/93‑1 (MQ=255)
          cGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTa                                                                               >  1:5309474/1‑93 (MQ=255)
            ccAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACa                                                                             <  2:1644206/93‑1 (MQ=255)
             cAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACaa                                                                            >  2:1192658/1‑93 (MQ=255)
             cAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACaa                                                                            >  1:5072881/1‑93 (MQ=255)
              aaCACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAg                                                                           >  1:3557680/1‑93 (MQ=255)
                cacCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTa                                                                         >  2:212303/1‑93 (MQ=255)
                cacCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTa                                                                         <  1:4459494/93‑1 (MQ=255)
                  ccATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATc                                                                       >  2:1833319/1‑93 (MQ=255)
                   cATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCt                                                                      <  2:6432511/93‑1 (MQ=255)
                   cATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCt                                                                      <  1:6211618/93‑1 (MQ=255)
                   cATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCt                                                                      <  2:5447085/93‑1 (MQ=255)
                     tctctcAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTg                                                                    >  2:6010127/1‑93 (MQ=255)
                      ctctcAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGa                                                                   >  1:4114420/1‑93 (MQ=255)
                       tctcAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGaa                                                                  >  2:1565977/1‑93 (MQ=255)
                         tcAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAGGGTACAAGTATCTTGAAgg                                                                <  1:6316730/93‑1 (MQ=255)
                         tcAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAgg                                                                <  2:3404962/93‑1 (MQ=255)
                          cAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGt                                                               <  2:6056332/93‑1 (MQ=255)
                            gTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTc                                                             <  1:1362851/93‑1 (MQ=255)
                            gTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTc                                                             <  1:335097/93‑1 (MQ=255)
                             ttttCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCa                                                            >  2:3820602/1‑93 (MQ=255)
                                   ggCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCaa                                                      <  2:5155980/93‑1 (MQ=255)
                                   ggCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCaa                                                      >  2:4582104/1‑93 (MQ=255)
                                   ggCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCaa                                                      <  2:2325318/93‑1 (MQ=255)
                                   ggCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCaa                                                      <  2:5374155/93‑1 (MQ=255)
                                   ggCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCaa                                                      >  2:4757143/1‑93 (MQ=255)
                                    gCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAAt                                                     <  1:308413/93‑1 (MQ=255)
                                     cGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATc                                                    <  1:2061555/93‑1 (MQ=255)
                                       ttAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCAt                                                  >  2:5628697/1‑93 (MQ=255)
                                       ttAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCAt                                                  >  2:4078968/1‑93 (MQ=255)
                                         aGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGt                                                <  1:123936/93‑1 (MQ=255)
                                          gACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTa                                               <  2:2721939/93‑1 (MQ=255)
                                          gACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTa                                               >  1:974629/1‑93 (MQ=255)
                                           aCCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTaa                                              <  1:3453454/93‑1 (MQ=255)
                                             cgccgGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAata                                            <  2:5413756/93‑1 (MQ=255)
                                                cgGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGt                                         <  1:5012353/93‑1 (MQ=255)
                                                 ggATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTa                                        >  1:5178907/1‑93 (MQ=255)
                                                 ggATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTa                                        <  1:5826031/93‑1 (MQ=255)
                                                 ggATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTa                                        <  2:4953147/93‑1 (MQ=255)
                                                  gATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTac                                       <  1:1738095/93‑1 (MQ=255)
                                                   aTGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTaca                                      <  2:2352346/93‑1 (MQ=255)
                                                   aTGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTaca                                      <  1:4522299/93‑1 (MQ=255)
                                                    tGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTacac                                     <  2:6162829/93‑1 (MQ=255)
                                                     gTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACAcc                                    >  1:2819363/1‑93 (MQ=255)
                                                       taTGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCgg                                  <  2:173740/92‑1 (MQ=255)
                                                       cATGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCgg                                  <  1:5294435/93‑1 (MQ=255)
                                                         tGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAg                                <  1:305673/93‑1 (MQ=255)
                                                         tGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAg                                <  1:856377/93‑1 (MQ=255)
                                                         tGGATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAg                                <  1:1398578/93‑1 (MQ=255)
                                                           gATTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGt                              >  1:2205281/1‑93 (MQ=255)
                                                           gATTGTTTGCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGt                              >  1:6280174/1‑93 (MQ=255)
                                                            aTTGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTa                             <  2:1413460/93‑1 (MQ=255)
                                                             ttGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTAc                            >  1:4566750/1‑93 (MQ=255)
                                                              tGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACa                           <  1:5837017/93‑1 (MQ=255)
                                                              tGTTTTCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACa                           <  1:684426/93‑1 (MQ=255)
                                                                ttttCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACata                         >  1:5927598/1‑93 (MQ=255)
                                                                ttttCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACata                         >  2:4029705/1‑93 (MQ=255)
                                                                ttttCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACata                         <  1:5263900/93‑1 (MQ=255)
                                                                 tttCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACatat                        <  1:4204077/93‑1 (MQ=255)
                                                                 tttCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACatat                        <  2:3562875/93‑1 (MQ=255)
                                                                  ttCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATAtt                       <  2:5279681/93‑1 (MQ=255)
                                                                   tCATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTg                      >  1:3854452/1‑93 (MQ=255)
                                                                    cATAACGAAATTAAATCCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGt                     <  1:5521806/93‑1 (MQ=255)
                                                                    cATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGt                     <  2:193699/93‑1 (MQ=255)
                                                                    cATAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGt                     <  1:5170854/93‑1 (MQ=255)
                                                                     aTAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTa                    >  1:1005177/1‑93 (MQ=255)
                                                                     aTAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTa                    >  2:3478498/1‑93 (MQ=255)
                                                                      tAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTAt                   <  1:4903794/93‑1 (MQ=255)
                                                                      tAACGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTAt                   <  1:1074694/93‑1 (MQ=255)
                                                                      tAACGAAATTAAAACCCTTGCACCGTTAAGGGACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTAt                   >  2:312524/1‑93 (MQ=255)
                                                                       aaCGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATg                  <  2:3283970/93‑1 (MQ=255)
                                                                       aaCGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATg                  >  2:6235702/1‑93 (MQ=255)
                                                                        aCGAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGa                 >  1:1060279/1‑93 (MQ=255)
                                                                          gAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGaaa               <  2:4259440/93‑1 (MQ=255)
                                                                          gAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGaaa               <  1:3763894/93‑1 (MQ=255)
                                                                          gAAATTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGaaa               <  1:5113439/93‑1 (MQ=255)
                                                                            aaTTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGc             <  1:4805651/93‑1 (MQ=255)
                                                                             aTTAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCg            <  2:8457/93‑1 (MQ=255)
                                                                              ttAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGt           >  2:5143693/1‑93 (MQ=255)
                                                                               tAAAACCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTa          >  2:703064/1‑93 (MQ=255)
                                                                                aaaaCCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTAt         >  2:2469561/1‑93 (MQ=255)
                                                                                aaaaCCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTAt         <  2:3249231/93‑1 (MQ=255)
                                                                                 aaaCCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTAtt        <  1:5450414/93‑1 (MQ=255)
                                                                                 aaaCCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTAtt        <  1:1158103/93‑1 (MQ=255)
                                                                                  aaCCCTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTg       <  1:359585/93‑1 (MQ=255)
                                                                                    cccTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTggg     >  2:3749142/1‑93 (MQ=255)
                                                                                     ccTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTgggc    >  1:2746905/1‑92 (MQ=255)
                                                                                     ccTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTGGGa    >  2:1245615/1‑93 (MQ=255)
                                                                                     ccTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTGGGa    >  1:6126391/1‑93 (MQ=255)
                                                                                     ccTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTGGGa    <  1:5466101/93‑1 (MQ=255)
                                                                                      cTTGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTGGGAc   >  1:2644692/1‑93 (MQ=255)
                                                                                       ttGCACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTGGGAct  >  2:4516984/1‑93 (MQ=255)
                                                                                          |                                                                                         
GAAGAATTCCCGCCAACACCATCTCTCAGTTTTCTGGCGTTAGACCGCCGGATGTCATGGATTGTTTTCATAACGAAATTAAAACCCTTGTACCGTTAAGGTACAAGTATCTTGAAGGTTCATTTCAATCATGTAATATGTACACCGGAGGTACATATTGTATGAAAGCGTATTGGGACT  >  NC_000913/1202086‑1202265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: