Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,305,135 T→C T14A (ACG→GCG)  b1248 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,305,1350TC99.6% 815.7 / ‑5.1 233T14A (ACG→GCG) b1248hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (106/126);  minor base A (0/1);  total (106/127)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 241 total aligned reads displayed.

CTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTG  >  NC_000913/1305045‑1305224
                                                                                           |                                                                                         
ctTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGctt                                                                                         >  1:5683990/1‑93 (MQ=255)
ctTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGCCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGctt                                                                                         <  2:4532458/93‑1 (MQ=255)
  tCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCa                                                                                       >  1:6120914/1‑93 (MQ=255)
     aaCTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCt                                                                                    <  1:3605928/93‑1 (MQ=255)
       cTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtc                                                                                  <  2:1657675/93‑1 (MQ=255)
        tGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtca                                                                                 >  2:4963129/1‑93 (MQ=255)
         gAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcag                                                                                <  2:2405171/93‑1 (MQ=255)
         gAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcag                                                                                >  2:5822515/1‑93 (MQ=255)
          aaGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcagt                                                                               <  1:655579/93‑1 (MQ=255)
          aaGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcagt                                                                               <  2:671818/93‑1 (MQ=255)
           aGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcagtc                                                                              >  2:1184785/1‑93 (MQ=255)
            gATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcagtca                                                                             >  1:4742187/1‑93 (MQ=255)
             aTTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcagtcag                                                                            <  2:3880300/93‑1 (MQ=255)
             aTTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcagtcag                                                                            <  2:126059/93‑1 (MQ=255)
             aTTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTtcagtcag                                                                            <  2:2788093/93‑1 (MQ=255)
              ttGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAgg                                                                           <  2:4020630/93‑1 (MQ=255)
               tGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGc                                                                          <  1:1564420/93‑1 (MQ=255)
                 aaCAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGa                                                                        >  2:801781/1‑93 (MQ=255)
                 aaCAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGa                                                                        >  1:1921444/1‑93 (MQ=255)
                  aCAGCAAAACATCAAATGGATCGAAATTGTCGGCAGCAAGTTCGAGAAGAAACTCGTAGGCCTGTTCTCGCGATTCATCTTCAGTCAGGCGAt                                                                       <  1:6465520/93‑1 (MQ=255)
                   cagcagAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGAtt                                                                      >  1:97569/1‑93 (MQ=255)
                   cagcagAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGAtt                                                                      <  1:1642591/93‑1 (MQ=255)
                    agcagAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTg                                                                     >  2:1492930/1‑93 (MQ=255)
                    agcagAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTg                                                                     >  2:315387/1‑93 (MQ=255)
                     gcagAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGt                                                                    <  2:4591803/93‑1 (MQ=255)
                      cagAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGtt                                                                   <  1:2981877/93‑1 (MQ=255)
                        gAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGttt                                                                  >  2:4370951/1‑93 (MQ=255)
                        gAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTa                                                                 >  2:3307955/1‑93 (MQ=255)
                        gAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTa                                                                 <  1:1093470/93‑1 (MQ=255)
                        gAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTa                                                                 <  1:4466127/93‑1 (MQ=255)
                        gAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTa                                                                 <  1:1240828/93‑1 (MQ=255)
                          aCATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGa                                                               <  2:4158299/93‑1 (MQ=255)
                           cATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGat                                                              <  2:4798704/93‑1 (MQ=255)
                            aTCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGatc                                                             >  1:5848276/1‑93 (MQ=255)
                               aGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGatccat                                                          >  2:2491147/1‑93 (MQ=255)
                                  tGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGatccatatc                                                       >  1:4975447/1‑93 (MQ=255)
                                  tGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGatccatatc                                                       >  2:5204983/1‑93 (MQ=255)
                                    gATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGatccatatcca                                                     <  2:3095916/93‑1 (MQ=255)
                                     aTCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGatccatatccat                                                    >  1:5186020/1‑93 (MQ=255)
                                      tCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGAtccatatccata                                                   >  2:6079344/1‑93 (MQ=255)
                                       cGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAg                                                  <  2:566775/93‑1 (MQ=255)
                                         agaTTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGtt                                                >  2:5092690/1‑93 (MQ=255)
                                         agaTTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGtt                                                >  1:2856028/1‑93 (MQ=255)
                                         agaTTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGtt                                                >  1:2927343/1‑93 (MQ=255)
                                         agaTTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGtt                                                <  2:2351466/93‑1 (MQ=255)
                                          gaTTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTta                                               <  2:5942232/93‑1 (MQ=255)
                                           aTTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTtac                                              >  1:5073109/1‑93 (MQ=255)
                                            ttGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTtact                                             <  1:4331384/93‑1 (MQ=255)
                                             tGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTttcta                                            <  2:1399805/93‑1 (MQ=255)
                                             tGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTtacta                                            >  1:1737553/1‑93 (MQ=255)
                                              gTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTtactac                                           >  1:5715375/1‑93 (MQ=255)
                                               tCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTAcc                                          <  1:2397473/93‑1 (MQ=255)
                                                 ggCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTg                                        <  1:5271032/93‑1 (MQ=255)
                                                  gCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCGTAGTTACTACCTGt                                       <  2:3035494/93‑1 (MQ=255)
                                                  gCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGt                                       <  2:2838797/93‑1 (MQ=255)
                                                  gCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGt                                       >  1:4605659/1‑93 (MQ=255)
                                                    aGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGttt                                     >  2:3616973/1‑93 (MQ=255)
                                                    aGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGttt                                     <  1:6246775/93‑1 (MQ=255)
                                                    aGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGttt                                     <  2:1806564/93‑1 (MQ=255)
                                                    aGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGttt                                     <  2:2055131/93‑1 (MQ=255)
                                                    aGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGttt                                     <  2:2236143/93‑1 (MQ=255)
                                                       cAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAAc                                  <  1:1410997/93‑1 (MQ=255)
                                                        aGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAAcc                                 <  1:2036743/93‑1 (MQ=255)
                                                        aGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAAcc                                 >  1:148566/1‑93 (MQ=255)
                                                        aGTTAGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAAcc                                 <  2:5250319/93‑1 (MQ=255)
                                                         gTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACct                                >  1:3273362/1‑93 (MQ=255)
                                                         gTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACct                                >  1:790719/1‑93 (MQ=255)
                                                          ttCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACctc                               <  2:1886610/93‑1 (MQ=255)
                                                          ttCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACctc                               <  1:4165025/93‑1 (MQ=255)
                                                          ttCGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACctc                               <  1:3553802/93‑1 (MQ=255)
                                                            cGAGAAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTg                             >  2:5776169/1‑93 (MQ=255)
                                                             gagaAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGt                            >  1:5297076/1‑93 (MQ=255)
                                                               gaAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTTTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTg                          <  2:4066315/93‑1 (MQ=255)
                                                               gaAAAATATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTg                          >  1:3362550/1‑93 (MQ=255)
                                                                 aaaaaTATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTgg                         <  2:5275442/93‑1 (MQ=255)
                                                                  aaaaTATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGc                        >  1:3760915/1‑93 (MQ=255)
                                                                    aaTATCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGa                      >  2:5322685/1‑93 (MQ=255)
                                                                       atCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGt                   <  1:6240507/93‑1 (MQ=255)
                                                                        tCGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTCCCTGTTTAACCTCTGTTGGCGACGtt                  <  2:142576/93‑1 (MQ=255)
                                                                         cGTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGttt                 <  1:5624841/93‑1 (MQ=255)
                                                                          gTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGtttt                <  1:738458/93‑1 (MQ=255)
                                                                          gTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGtttt                >  1:5439311/1‑93 (MQ=255)
                                                                          gTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGtttt                <  1:2522419/93‑1 (MQ=255)
                                                                          gTAGGCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGtttt                <  1:1025672/93‑1 (MQ=255)
                                                                             ggCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACa             >  1:5040138/1‑93 (MQ=255)
                                                                             ggCCTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACa             <  2:2609858/93‑1 (MQ=255)
                                                                               ccTGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGc           <  2:833673/93‑1 (MQ=255)
                                                                                 tGTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCaa         <  2:3974569/93‑1 (MQ=255)
                                                                                  gTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAAc        >  2:506818/1‑93 (MQ=255)
                                                                                  gTTCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAAc        >  1:4028857/1‑93 (MQ=255)
                                                                                    tCAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACgg      <  1:6049592/93‑1 (MQ=255)
                                                                                     cAAGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGa     <  2:3333612/93‑1 (MQ=255)
                                                                                      aaGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGAc    <  2:5033525/93‑1 (MQ=255)
                                                                                      aaGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGAc    <  1:1814916/93‑1 (MQ=255)
                                                                                      aaGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGAc    <  1:2199323/93‑1 (MQ=255)
                                                                                      aaGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGAc    >  1:1381610/1‑93 (MQ=255)
                                                                                      aaGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGATTAACCTCTGTTGGCGACGTTGTACAGCAACGGAc    >  1:860587/1‑93 (MQ=255)
                                                                                       aGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACt   >  2:5408198/1‑93 (MQ=255)
                                                                                       aGCGCTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACt   <  2:3801485/93‑1 (MQ=255)
                                                                                        gcgcTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTg  <  2:6422831/93‑1 (MQ=255)
                                                                                           |                                                                                         
CTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTG  >  NC_000913/1305045‑1305224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: