BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,391,027	A→G	intergenic (+113/‑203)	ycjZ → / → b1329	putative transcriptional regulator LYSR‑type/putative transport periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,391,027	0	A	G	100.0%	963.2 / NA	273	intergenic (+113/‑203)	ycjZ/b1329	putative transcriptional regulator LYSR‑type/putative transport periplasmic protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/139); total (134/139)

Only 100 of 282 total aligned reads displayed.

TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTA  >  NC_000913/1390937‑1391116

ttaattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGcc                                                                                         >  2:1303944/1‑93 (MQ=255)

     tcttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaaa                                                                                    <  1:1916308/93‑1 (MQ=255)

      cttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAc                                                                                   >  2:2977556/1‑93 (MQ=255)

       ttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACg                                                                                  >  2:2161827/1‑93 (MQ=255)

       ttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACg                                                                                  >  1:3931868/1‑93 (MQ=255)

         ctctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACggg                                                                                <  2:2401564/93‑1 (MQ=255)

          tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt                                                                               >  1:835087/1‑93 (MQ=255)

          tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt                                                                               >  1:3687124/1‑93 (MQ=255)

          tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt                                                                               >  2:105724/1‑93 (MQ=255)

            ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt                                                                             >  2:2289611/1‑93 (MQ=255)

            ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt                                                                             >  2:660779/1‑93 (MQ=255)

              aaCGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGa                                                                           >  2:195415/1‑93 (MQ=255)

               aCGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGaa                                                                          <  1:4159426/93‑1 (MQ=255)

               aCGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGaa                                                                          >  2:531669/1‑93 (MQ=255)

                 gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACg                                                                        >  1:5532606/1‑93 (MQ=255)

                 gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACg                                                                        <  1:4697835/93‑1 (MQ=255)

                 gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGATTGAACg                                                                        >  2:6355985/1‑93 (MQ=255)

                  tATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGt                                                                       >  1:3564786/1‑93 (MQ=255)

                  tATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGt                                                                       >  1:1181200/1‑93 (MQ=255)

                   aTTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTg                                                                      <  2:4481942/93‑1 (MQ=255)

                    ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGc                                                                     >  1:2148070/1‑93 (MQ=255)

                     tctcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCg                                                                    <  2:5291215/93‑1 (MQ=255)

                     tctcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCg                                                                    <  2:4924136/93‑1 (MQ=255)

                     tctcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCg                                                                    >  2:84259/1‑93 (MQ=255)

                       tcAGTTCCTTTCAGCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa                                                                  <  1:2372533/93‑1 (MQ=255)

                       tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa                                                                  <  1:2525782/93‑1 (MQ=255)

                       tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa                                                                  <  1:3731980/93‑1 (MQ=255)

                       tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa                                                                  >  1:6036994/1‑93 (MQ=255)

                         aGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGc                                                                <  2:1874790/93‑1 (MQ=255)

                          gTTCCTTTCAACGTTTTGGTCA‑TTTTTATTCTTCGTACAATGGCGACAGATGCTTATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                              >  1:3469197/1‑93 (MQ=255)

                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                              >  2:2951283/1‑93 (MQ=255)

                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                              >  2:2861729/1‑93 (MQ=255)

                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                              >  2:6025304/1‑93 (MQ=255)

                             ccTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGa                                                            >  2:3705486/1‑93 (MQ=255)

                              cTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGaa                                                           <  1:5434118/93‑1 (MQ=255)

                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc                                                          <  2:531222/93‑1 (MQ=255)

                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc                                                          >  1:3106193/1‑93 (MQ=255)

                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAACCCCGAAc                                                          <  1:6133554/93‑1 (MQ=255)

                                  cAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTa                                                       <  2:5574347/93‑1 (MQ=255)

                                  cAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTa                                                       <  2:3411186/93‑1 (MQ=255)

                                   aaCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg                                                      <  2:3958310/93‑1 (MQ=255)

                                    aCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgt                                                     >  2:5119030/1‑93 (MQ=255)

                                      gTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgtgt                                                   >  1:4665176/1‑93 (MQ=255)

                                       ttttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGtt                                                  <  2:6126531/93‑1 (MQ=255)

                                        tttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTc                                                 <  2:4002706/93‑1 (MQ=255)

                                        tttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTc                                                 <  1:689953/93‑1 (MQ=255)

                                        tttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTc                                                 <  2:1587264/93‑1 (MQ=255)

                                         ttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCg                                                <  2:70277/93‑1 (MQ=255)

                                           ggTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCggt                                              >  2:3275704/1‑92 (MQ=255)

                                             tCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGt                                            >  2:2444129/1‑93 (MQ=255)

                                              cATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGtt                                           <  2:1644896/93‑1 (MQ=255)

                                              cATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGtt                                           >  2:4763246/1‑93 (MQ=255)

                                              cATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGtt                                           <  1:1703406/93‑1 (MQ=255)

                                               aTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTc                                          <  1:6330151/93‑1 (MQ=255)

                                                ttttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCt                                         <  2:2087855/93‑1 (MQ=255)

                                                 tttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTa                                        >  2:4233986/1‑93 (MQ=255)

                                                  ttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAt                                       <  2:1026167/93‑1 (MQ=255)

                                                   tttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtg                                      >  1:5751683/1‑93 (MQ=255)

                                                   tttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtg                                      <  2:2813386/93‑1 (MQ=255)

                                                    ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt                                     <  1:1099466/93‑1 (MQ=255)

                                                      aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc                                   <  1:4837213/93‑1 (MQ=255)

                                                       ttcttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCt                                  <  1:4231872/93‑1 (MQ=255)

                                                        tcttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCtt                                 <  1:2907574/93‑1 (MQ=255)

                                                          ttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTa                               >  2:921394/1‑93 (MQ=255)

                                                          ttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTa                               >  1:6185744/1‑93 (MQ=255)

                                                           tcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAc                              <  2:6277368/93‑1 (MQ=255)

                                                           tcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAc                              <  2:2376343/93‑1 (MQ=255)

                                                            cGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAcc                             >  2:3577409/1‑93 (MQ=255)

                                                            cGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAcc                             >  2:5429986/1‑93 (MQ=255)

                                                               aCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCa                          >  1:5408092/1‑93 (MQ=255)

                                                               aCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCa                          >  1:432515/1‑93 (MQ=255)

                                                               aCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGGTCTATGTGCTTTACCGCa                          >  1:4994036/1‑93 (MQ=255)

                                                                cAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAt                         <  2:3745387/93‑1 (MQ=255)

                                                                 aaTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtt                        <  2:3660454/93‑1 (MQ=255)

                                                                 aaTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtt                        >  1:2226594/1‑93 (MQ=255)

                                                                 aaTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtt                        >  1:3314415/1‑93 (MQ=255)

                                                                  aTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAttt                       >  2:268797/1‑93 (MQ=255)

                                                                    ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg                     >  1:3016303/1‑93 (MQ=255)

                                                                    ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg                     >  2:3818162/1‑93 (MQ=255)

                                                                      cGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGga                   <  1:1347144/93‑1 (MQ=255)

                                                                         cAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGCGCTTTACCGCATTTTGGAGAc                >  2:3141606/1‑93 (MQ=255)

                                                                          aGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACt               <  2:575145/93‑1 (MQ=255)

                                                                           gATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACta              <  2:4835886/93‑1 (MQ=255)

                                                                           gATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACta              >  2:5945659/1‑93 (MQ=255)

                                                                            aTGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtat             <  1:2098571/93‑1 (MQ=255)

                                                                            aTGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtat             <  2:3538505/93‑1 (MQ=255)

                                                                             tGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatt            <  1:2773600/93‑1 (MQ=255)

                                                                             tGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatt            <  2:538139/93‑1 (MQ=255)

                                                                              gCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatta           <  1:2702645/93‑1 (MQ=255)

                                                                                 gATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAttt        <  1:1419586/93‑1 (MQ=255)

                                                                                 gATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAttt        >  2:772515/1‑93 (MQ=255)

                                                                                  aTTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAtttc       >  1:156288/1‑92 (MQ=255)

                                                                                   ttATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTac      >  2:5699021/1‑93 (MQ=255)

                                                                                     atgatgCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTacac    >  1:944434/1‑93 (MQ=255)

                                                                                     atgatgCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTacac    <  2:4692707/93‑1 (MQ=255)

                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa  >  2:4434260/1‑93 (MQ=255)

                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa  >  1:4546641/1‑93 (MQ=255)

                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa  <  1:5224835/93‑1 (MQ=255)

                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa  >  2:1188483/1‑93 (MQ=255)

                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa  <  1:102488/93‑1 (MQ=255)

TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTA  >  NC_000913/1390937‑1391116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`