Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,680,793 T→C V207A (GTG→GCG)  rstA → response transcriptional regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,680,7930TC99.5% 702.0 / NA 206V207A (GTG→GCG) rstAresponse transcriptional regulatory protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (92/113);  minor base A (0/1);  total (92/114)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 208 total aligned reads displayed.

CTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGTGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCTTTTTG  >  NC_000913/1680703‑1680882
                                                                                          |                                                                                         
cTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATGGTAGCGTGGACGCgg                                                                                         >  2:386023/1‑93 (MQ=255)
 tACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGc                                                                                        <  2:4487014/93‑1 (MQ=255)
 tACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGc                                                                                        <  2:6189729/93‑1 (MQ=255)
 tACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGc                                                                                        >  1:5522691/1‑93 (MQ=255)
  aCCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCt                                                                                       >  2:1634088/1‑93 (MQ=255)
   cccATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTa                                                                                      >  2:1766671/1‑93 (MQ=255)
   cccATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTa                                                                                      >  1:3800518/1‑93 (MQ=255)
    ccATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAt                                                                                     >  2:5963689/1‑93 (MQ=255)
    ccATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAt                                                                                     >  1:6428022/1‑93 (MQ=255)
    ccATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAt                                                                                     >  2:3781589/1‑93 (MQ=255)
     cATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAtt                                                                                    <  2:4726834/93‑1 (MQ=255)
     cATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAtt                                                                                    <  1:2269312/93‑1 (MQ=255)
      aTGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAttt                                                                                   >  1:4017653/1‑93 (MQ=255)
      aTGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAttt                                                                                   <  1:6258369/93‑1 (MQ=255)
      aTGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTAttt                                                                                   <  2:3991335/93‑1 (MQ=255)
          cGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTcgcg                                                                               >  1:619764/1‑93 (MQ=255)
          cGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTcgcg                                                                               >  1:2311670/1‑93 (MQ=255)
           gggCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCgg                                                                              <  2:2705719/93‑1 (MQ=255)
            ggCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGt                                                                             <  1:3598474/93‑1 (MQ=255)
             gCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGtt                                                                            <  2:4095702/93‑1 (MQ=255)
              cAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTa                                                                           >  2:6389996/1‑93 (MQ=255)
                aaTCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAg                                                                         <  2:837354/93‑1 (MQ=255)
                 aTCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGa                                                                        <  1:2563546/93‑1 (MQ=255)
                  tCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGaa                                                                       >  2:1069400/1‑93 (MQ=255)
                    aTGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGaaaa                                                                     >  1:2919731/1‑93 (MQ=255)
                    aTGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGaaaa                                                                     >  2:242977/1‑93 (MQ=255)
                    aTGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGaaaa                                                                     >  1:4133113/1‑93 (MQ=255)
                      ggACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGaaaaaa                                                                   >  2:3014193/1‑93 (MQ=255)
                        gccGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAAc                                                                 <  1:5229803/92‑1 (MQ=255)
                        aCCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAAc                                                                 >  2:2147981/1‑93 (MQ=255)
                         ccGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACt                                                                >  1:6446835/1‑93 (MQ=255)
                           gcgATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGc                                                              >  1:5355436/1‑93 (MQ=255)
                           gcgATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGc                                                              <  2:1334494/93‑1 (MQ=255)
                            cgATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCt                                                             <  2:5092255/93‑1 (MQ=255)
                            cgATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCt                                                             <  2:2594189/93‑1 (MQ=255)
                             gATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTc                                                            <  2:6375493/93‑1 (MQ=255)
                              aTGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCg                                                           >  2:5868151/1‑93 (MQ=255)
                              aTGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCg                                                           >  1:195317/1‑93 (MQ=255)
                               tGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGa                                                          >  2:5035065/1‑93 (MQ=255)
                               tGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGa                                                          <  1:2671436/93‑1 (MQ=255)
                               tGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGa                                                          >  2:3145247/1‑93 (MQ=255)
                               tGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGa                                                          <  1:4376816/93‑1 (MQ=255)
                                gCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGAt                                                         <  1:2191132/93‑1 (MQ=255)
                                gCATTGCTGAAAAAGTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGAt                                                         <  2:1213049/93‑1 (MQ=255)
                                   ttGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAAc                                                      <  2:6298792/93‑1 (MQ=255)
                                        gAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAAcgccgc                                                 >  1:5532576/1‑93 (MQ=255)
                                        gAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAAcgccgc                                                 <  2:5738488/93‑1 (MQ=255)
                                           aaaTTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGa                                              <  1:3629938/93‑1 (MQ=255)
                                              tttACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAAcc                                           <  2:1526348/93‑1 (MQ=255)
                                               ttACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCt                                          <  2:1373751/93‑1 (MQ=255)
                                                 aCGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTa                                        <  2:3494723/93‑1 (MQ=255)
                                                   gcggcgTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATc                                      <  1:5684485/93‑1 (MQ=255)
                                                   gcggcgTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATc                                      >  2:4644341/1‑93 (MQ=255)
                                                    cggcgTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCg                                     <  2:457090/93‑1 (MQ=255)
                                                    cggcgTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCg                                     >  2:2077398/1‑93 (MQ=255)
                                                     ggcgTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGc                                    <  2:2835140/93‑1 (MQ=255)
                                                     ggcgTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGc                                    >  2:1703720/1‑93 (MQ=255)
                                                      gcgTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCa                                   <  1:5937146/93‑1 (MQ=255)
                                                        gTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCAtt                                 <  1:1046080/93‑1 (MQ=255)
                                                        gTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCAtt                                 <  1:3464543/93‑1 (MQ=255)
                                                        gTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCAtt                                 <  2:705576/93‑1 (MQ=255)
                                                        gTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCAtt                                 <  2:6077468/93‑1 (MQ=255)
                                                        gTCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCAtt                                 <  1:3770309/93‑1 (MQ=255)
                                                         tCAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTa                                <  2:3722971/93‑1 (MQ=255)
                                                          cAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTaa                               <  2:1856684/93‑1 (MQ=255)
                                                          cAGTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCAGATTaa                               >  2:2179532/1‑93 (MQ=255)
                                                            gTTATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTaaaa                             >  2:4782618/1‑93 (MQ=255)
                                                             ttATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAAc                            <  2:3412682/93‑1 (MQ=255)
                                                             ttATGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAAc                            <  1:3137824/93‑1 (MQ=255)
                                                               aTGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACtg                          >  1:2522955/1‑93 (MQ=255)
                                                               aTGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACtg                          >  2:1428942/1‑93 (MQ=255)
                                                                tGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACtgt                         >  1:4768579/1‑93 (MQ=255)
                                                                tGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACtgt                         <  1:1569878/93‑1 (MQ=255)
                                                                tGACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACtgt                         >  2:4314668/1‑93 (MQ=255)
                                                                 gACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACtgtg                        <  1:323663/93‑1 (MQ=255)
                                                                 gACGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACtgtg                        >  2:1143996/1‑93 (MQ=255)
                                                                  aCGGACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGc                       >  1:491919/1‑93 (MQ=255)
                                                                    cgACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGt                     <  1:545899/92‑1 (MQ=255)
                                                                     gACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTa                    >  2:1571393/1‑93 (MQ=255)
                                                                     gACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTa                    >  2:3216685/1‑93 (MQ=255)
                                                                     gACTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTa                    >  1:2030279/1‑93 (MQ=255)
                                                                      aCTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTaa                   <  2:945709/93‑1 (MQ=255)
                                                                       cTGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAAc                  >  1:1139515/1‑93 (MQ=255)
                                                                        tGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTcaca                 >  2:236690/1‑93 (MQ=255)
                                                                        tGGATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACa                 <  1:4816767/93‑1 (MQ=255)
                                                                         ggATCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACaa                >  2:2917823/1‑93 (MQ=255)
                                                                          gATCGTAGCGTGGACGAGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACaaa               <  1:5125301/93‑1 (MQ=255)
                                                                            tCGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAgg             >  2:5610227/1‑93 (MQ=255)
                                                                             cGTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAGCCTTATCGCATTAAAACTGTGCGTAACAAAGGc            <  1:1418650/93‑1 (MQ=255)
                                                                              gTAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCt           >  1:5727620/1‑93 (MQ=255)
                                                                               tAGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTa          <  2:5372644/93‑1 (MQ=255)
                                                                                aGCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTAt         >  1:1702240/1‑93 (MQ=255)
                                                                                 gCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATc        <  1:937993/93‑1 (MQ=255)
                                                                                 gCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATc        <  1:739762/93‑1 (MQ=255)
                                                                                 gCGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATc        <  2:872123/93‑1 (MQ=255)
                                                                                  cGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCt       >  1:5094338/1‑93 (MQ=255)
                                                                                  cGTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCt       <  2:4833592/93‑1 (MQ=255)
                                                                                   gTGGACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCtt      <  1:3505941/93‑1 (MQ=255)
                                                                                     ggACGCGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCtttt    >  2:1672133/1‑93 (MQ=255)
                                                                                       aCGCGGCTATTCCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCTTTTTg  >  2:1502288/1‑93 (MQ=255)
                                                                                          |                                                                                         
CTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGTGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCTTTTTG  >  NC_000913/1680703‑1680882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: