BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,705,052	T→C	V37A (GTA→GCA)	b1629 →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,705,052	0	T	C	100.0%	527.5 / NA	159	V37A (GTA→GCA)	b1629	putative membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (50/109); total (50/109)

Only 100 of 196 total aligned reads displayed.

CATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGC  >  NC_000913/1704962‑1705141

  ttCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCCGGCAccc                                                                                       >  2:419380/1‑93 (MQ=255)

  ttCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCAccc                                                                                       <  1:3889752/93‑1 (MQ=255)

  ttCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCAccc                                                                                       <  2:1041254/93‑1 (MQ=255)

   tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACTGTACACCCCT‑GCGCCAGGCAcccc                                                                                      <  1:2181534/93‑1 (MQ=255)

   tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCAcccc                                                                                      <  2:4970668/93‑1 (MQ=255)

   tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCAcccc                                                                                      <  1:6402673/93‑1 (MQ=255)

    cAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCt                                                                                     <  2:3315390/93‑1 (MQ=255)

    cAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCt                                                                                     <  1:2676742/93‑1 (MQ=255)

     aGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTg                                                                                    <  2:1053069/93‑1 (MQ=255)

     aGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTg                                                                                    <  1:6223588/93‑1 (MQ=255)

      gAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGGACACCCCT‑GCGCCAGGCACCCCTgg                                                                                   >  2:2132510/1‑93 (MQ=255)

       aaaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCCGgc                                                                                  >  1:3767691/1‑93 (MQ=255)

        aaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCCCCCCTGgcc                                                                                 >  1:1045212/1‑92 (MQ=255)

         aaaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCCGgcgc                                                                                >  2:3926221/1‑93 (MQ=255)

          aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCa                                                                               <  1:4150949/93‑1 (MQ=255)

           aataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGgcgccg                                                                              >  2:4620349/1‑91 (MQ=255)

           aataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAg                                                                              >  2:606255/1‑93 (MQ=255)

           aataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAg                                                                              <  1:6072679/93‑1 (MQ=255)

            ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGc                                                                             <  1:1684076/93‑1 (MQ=255)

                aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAGCCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGttt                                                                         <  2:1176170/93‑1 (MQ=255)

                aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCCGCGttt                                                                         >  2:5292251/1‑93 (MQ=255)

                aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGttt                                                                         >  1:4066527/1‑93 (MQ=255)

                aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGttt                                                                         <  2:4864817/93‑1 (MQ=255)

                aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGttt                                                                         >  2:2897004/1‑93 (MQ=255)

                 atCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCCGGCACCCCCGGCGCAGCGgttt                                                                        >  1:3674162/1‑93 (MQ=255)

                   cTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGt                                                                      <  2:2279200/93‑1 (MQ=255)

                    tGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGGCCGGCACCCCCGGGGCAGCGGTTTGtt                                                                     >  1:6290261/1‑93 (MQ=255)

                     gggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTa                                                                    >  2:822418/1‑93 (MQ=255)

                      ggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTAt                                                                   >  1:3250520/1‑93 (MQ=255)

                        aTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGGCCCAAGGGACCCCT‑GCGCGCCGttttttttttt                                                                 >  2:456126/1‑92 (MQ=255)

                        aTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTc                                                                 >  2:5210001/1‑93 (MQ=255)

                         tttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTcc                                                                <  2:323513/93‑1 (MQ=255)

                         tttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTcc                                                                <  1:5551015/93‑1 (MQ=255)

                         tttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCCCGCGCAGCGGTtttttttttc                                                                >  1:5758332/1‑91 (MQ=255)

                           tCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCCGGCACCCCCGGCGCCGCGGTTTTTTTTTTCAc                                                              >  2:3579100/1‑93 (MQ=255)

                           tCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTcccc                                                              >  2:2706583/1‑91 (MQ=255)

                            cAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACt                                                             >  2:653526/1‑93 (MQ=255)

                             aaCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGTCGCAGCGTTTTGTTATTCCACTg                                                            <  2:3865810/93‑1 (MQ=255)

                             aaCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTg                                                            <  2:726125/93‑1 (MQ=255)

                               cggcggCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAAGCACCCCCCTCCCGGCGTGTTGTTTTTTCAccgta                                                          >  2:3513373/1‑89 (MQ=255)

                                 gcggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAAc                                                        >  1:5351705/1‑93 (MQ=255)

                                 gcggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAAc                                                        >  2:3178910/1‑93 (MQ=255)

                                  cggcATCCATCCACCGTAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACa                                                       <  1:867483/93‑1 (MQ=255)

                                  cggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACa                                                       <  1:4704421/93‑1 (MQ=255)

                                  cggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACa                                                       <  1:4230816/93‑1 (MQ=255)

                                  cggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACa                                                       <  2:5718276/93‑1 (MQ=255)

                                   ggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCAACTGAAACAg                                                      >  1:950231/1‑93 (MQ=255)

                                    gcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCCGGCGCAGCGGTTTTTTTTTTCACTTAAACAGc                                                     >  1:2603920/1‑93 (MQ=255)

                                     catccatcCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCa                                                    >  1:4344498/1‑93 (MQ=255)

                                     catccatcCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCa                                                    <  1:2283650/93‑1 (MQ=255)

                                      atccatccACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGGCAGGCCCCCCTGGCGCCGCGTTTTGTTATTTCACTCAAACAGCat                                                   >  2:1435879/1‑93 (MQ=255)

                                        ccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCatat                                                 <  1:5920782/93‑1 (MQ=255)

                                        ccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACACCT‑GCGACAGGCAACCCCGGCGCTCCGGTTTGTTTTTCCACTGGAACAAAatat                                                 >  1:2018353/1‑93 (MQ=255)

                                         catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATAtt                                                <  2:4392851/93‑1 (MQ=255)

                                         catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATAtt                                                <  2:3798088/93‑1 (MQ=255)

                                         catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATAtt                                                <  1:3480747/93‑1 (MQ=255)

                                         catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATAtt                                                <  2:2004844/93‑1 (MQ=255)

                                         catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCCCCAGGGACCCCTGGCGCAGCGTTTTGTTATTCCACTGACACAGCATAtt                                                >  1:5108783/1‑93 (MQ=255)

                                          atccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGTCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTg                                               <  2:5907921/93‑1 (MQ=255)

                                          atccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTg                                               <  1:5162463/93‑1 (MQ=255)

                                          atccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTg                                               <  1:3956098/93‑1 (MQ=255)

                                          atccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTg                                               <  2:5701548/93‑1 (MQ=255)

                                           tccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTgg                                              <  2:3286592/93‑1 (MQ=255)

                                           tccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTgg                                              <  1:3157373/93‑1 (MQ=255)

                                           tccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTgg                                              <  2:1636237/93‑1 (MQ=255)

                                               ccGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGGCAGGGACCCCCGGCGCAGCGGTTTGTTATTTCACTGAAACAGCATATTGGCGCt                                          >  2:403754/1‑93 (MQ=255)

                                                 ggAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGa                                        <  1:733454/93‑1 (MQ=255)

                                                   agaTGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAg                                      >  2:5796788/1‑93 (MQ=255)

                                                   agaTGAAAACCCAGTCCAACGGTACACCCCT‑GCCCCCGGCCCCCCCCCCGCCGCGGTTTGTTATTTCCCTTAAACAGCATATTTGGGCTGAAg                                      >  2:4819722/1‑93 (MQ=255)

                                                    gaTGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCCGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAgg                                     >  2:1925779/1‑93 (MQ=255)

                                                     aTGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGt                                    <  1:177877/93‑1 (MQ=255)

                                                      tGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTg                                   <  2:1161312/93‑1 (MQ=255)

                                                      tGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTg                                   <  2:615622/93‑1 (MQ=255)

                                                       gAAAACCCAGTCCAACGGTACACCCCT‑GCGCCCGGCACCCCCCGCGCAGCGTTTTGTTTTTGCACTGAAAAAACATATTTGCGCTGAAggggg                                  >  2:2592328/1‑90 (MQ=255)

                                                       gAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGa                                  <  1:4611530/93‑1 (MQ=255)

                                                       gAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGa                                  <  2:3118685/93‑1 (MQ=255)

                                                          aaCCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGtt                               >  2:5414933/1‑93 (MQ=255)

                                                          aaCCCAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGtt                               <  2:6456357/93‑1 (MQ=255)

                                                            accAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtgt                             <  2:4107113/92‑1 (MQ=255)

                                                              cAGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCCGCGGTTTGATATTCCACTGAAACAGCATATTGGCGCTGAAGGTGCGGTGTGc                           >  1:2095698/1‑93 (MQ=255)

                                                              cAGGCCAACGGTTCCCCCCT‑GCGCCAGTCTCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTTAGTTGTGc                           <  1:1923469/93‑1 (MQ=255)

                                                               aGTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCg                          <  2:2506525/93‑1 (MQ=255)

                                                                gTCCAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGt                         <  1:46347/93‑1 (MQ=255)

                                                                  ccAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa                       <  1:3423473/93‑1 (MQ=255)

                                                                   cAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAg                      <  2:4489166/93‑1 (MQ=255)

                                                                   cAACGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAg                      <  1:1569998/93‑1 (MQ=255)

                                                                     aCGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCg                    <  2:1513419/93‑1 (MQ=255)

                                                                      cGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGt                   <  2:3743649/93‑1 (MQ=255)

                                                                      cGGTACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGt                   <  1:5633967/93‑1 (MQ=255)

                                                                         tACACCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCgg                <  2:4751508/93‑1 (MQ=255)

                                                                           cacCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCg              >  2:608086/1‑93 (MQ=255)

                                                                           cacCCCT‑GCGCCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCg              <  1:2041413/93‑1 (MQ=255)

                                                                                  ggcgcCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAg        <  2:5377995/92‑1 (MQ=255)

                                                                                   gcgcCAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGt       >  1:1104156/1‑93 (MQ=255)

                                                                                       cAGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTg   <  2:2096513/93‑1 (MQ=255)

                                                                                        aGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTgc  >  2:1851549/1‑93 (MQ=255)

                                                                                        aGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTgc  >  2:123549/1‑93 (MQ=255)

                                                                                        aGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTgc  >  1:4811943/1‑93 (MQ=255)

                                                                                        aGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTgc  <  1:2987175/93‑1 (MQ=255)

                                                                                        aGGCACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTgc  <  2:702511/93‑1 (MQ=255)

CATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCT‑GCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGC  >  NC_000913/1704962‑1705141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`