BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,739,051	A→G	M373V (ATG→GTG)	ydhC →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,739,051	0	A	G	100.0%	785.1 / NA	221	M373V (ATG→GTG)	ydhC	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (94/127); total (94/127)

Only 100 of 231 total aligned reads displayed.

CTGTGCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAATGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGAATCA  >  NC_000913/1738961‑1739140

cTGTGCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTg                                                                                         >  2:1065390/1‑93 (MQ=255)

cTGTGCTCCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTg                                                                                         <  1:3857706/93‑1 (MQ=255)

 tgtgCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGc                                                                                        <  1:2087737/93‑1 (MQ=255)

 cgtgCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGc                                                                                        <  1:3043290/92‑1 (MQ=255)

  gtgCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTTTAAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCt                                                                                       >  1:3407955/1‑93 (MQ=255)

  gtgCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCt                                                                                       <  1:1922131/93‑1 (MQ=255)

  gtgCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCt                                                                                       >  2:3914206/1‑93 (MQ=255)

     cTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGt                                                                                    <  2:721478/93‑1 (MQ=255)

      ttCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGtg                                                                                   >  1:5983586/1‑92 (MQ=255)

      ttCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTc                                                                                   >  2:4726331/1‑93 (MQ=255)

      ttCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTc                                                                                   >  1:4538402/1‑93 (MQ=255)

       tCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcg                                                                                  <  2:866393/93‑1 (MQ=255)

       tCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcg                                                                                  <  2:3885514/93‑1 (MQ=255)

       tCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcg                                                                                  >  2:6109212/1‑93 (MQ=255)

        ccTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcgc                                                                                 >  2:3999131/1‑93 (MQ=255)

        ccTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcgc                                                                                 >  2:1467477/1‑93 (MQ=255)

         cTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcgcg                                                                                >  2:5197048/1‑93 (MQ=255)

             cAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTgg                                                                            >  1:6004781/1‑93 (MQ=255)

             cAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTgg                                                                            >  2:3157647/1‑93 (MQ=255)

             cAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTgg                                                                            <  1:5516898/93‑1 (MQ=255)

              aaGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTggg                                                                           <  1:4329114/93‑1 (MQ=255)

              aaGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTggg                                                                           >  2:1209573/1‑93 (MQ=255)

               aGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGt                                                                          <  2:1493306/93‑1 (MQ=255)

               aGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGt                                                                          >  2:5352793/1‑93 (MQ=255)

               aGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGt                                                                          <  2:5115787/93‑1 (MQ=255)

                gTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGtt                                                                         >  2:3480474/1‑93 (MQ=255)

                gTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGtt                                                                         <  2:1606885/93‑1 (MQ=255)

                gTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGCGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGtt                                                                         >  1:3283459/1‑93 (MQ=255)

                 tCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTa                                                                        >  1:6446210/1‑93 (MQ=255)

                   tGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACa                                                                      >  1:174157/1‑93 (MQ=255)

                   tGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACa                                                                      >  1:5360354/1‑93 (MQ=255)

                    ggTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACat                                                                     >  2:467546/1‑93 (MQ=255)

                     gTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatg                                                                    <  2:5587045/93‑1 (MQ=255)

                     gTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatg                                                                    <  1:1811802/93‑1 (MQ=255)

                      tAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatga                                                                   <  2:2482596/93‑1 (MQ=255)

                       aGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatgat                                                                  <  1:5477778/93‑1 (MQ=255)

                       aGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatgat                                                                  <  1:1412472/93‑1 (MQ=255)

                       aGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatgat                                                                  <  1:3321458/93‑1 (MQ=255)

                        gTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatgatg                                                                 >  1:3886502/1‑93 (MQ=255)

                         tttCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGc                                                                <  1:5628639/93‑1 (MQ=255)

                              tGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGt                                                           <  1:3179022/93‑1 (MQ=255)

                               ggCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGAGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGtt                                                          <  2:5889546/93‑1 (MQ=255)

                                 cTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTtgt                                                        <  1:3113667/93‑1 (MQ=255)

                                 cTGATCAGTATCAGCACGCCATTGCCCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTtgt                                                        <  2:2212782/93‑1 (MQ=255)

                                   gATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTga                                                      <  2:2870327/93‑1 (MQ=255)

                                     tCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTgaag                                                    <  2:5156597/93‑1 (MQ=255)

                                      cAGTATCATCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTgaaga                                                   >  1:6299564/1‑93 (MQ=255)

                                      cAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTgaaga                                                   >  1:2921700/1‑93 (MQ=255)

                                        gTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGaagaag                                                 <  2:1798685/93‑1 (MQ=255)

                                        gTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGaagaag                                                 <  1:1954822/93‑1 (MQ=255)

                                          aTCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGtt                                               <  1:514605/93‑1 (MQ=255)

                                           tCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTg                                              >  2:5769433/1‑93 (MQ=255)

                                             aGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGc                                            >  2:186374/1‑93 (MQ=255)

                                             aGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGc                                            >  1:557403/1‑93 (MQ=255)

                                             aGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGc                                            <  1:4089813/93‑1 (MQ=255)

                                              gCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTTCATGATGCAACGTTGTGAAGAAGTTGGCt                                           <  1:3547553/93‑1 (MQ=255)

                                              gCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCt                                           <  1:4724399/93‑1 (MQ=255)

                                              gCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCt                                           >  2:6392602/1‑93 (MQ=255)

                                                aCGCCATTGCTCACCACCACCAGCGCGATGTTATCAACAGTAGTGCTGGTGGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGc                                         >  2:3934498/1‑93 (MQ=255)

                                                 cGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGcc                                        <  2:3629092/93‑1 (MQ=255)

                                                   ccATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAg                                      >  2:4348261/1‑93 (MQ=255)

                                                   ccATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAg                                      <  2:1838992/93‑1 (MQ=255)

                                                     aTTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGaa                                    >  1:525409/1‑93 (MQ=255)

                                                     aTTGCTCAACACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGaa                                    <  1:5311762/93‑1 (MQ=255)

                                                        gCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCa                                 >  1:6193999/1‑93 (MQ=255)

                                                         cTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCAt                                <  2:3297962/93‑1 (MQ=255)

                                                         cTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCAt                                <  2:5701272/93‑1 (MQ=255)

                                                         atCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCAt                                <  1:6182825/92‑1 (MQ=255)

                                                          tCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATg                               >  1:186698/1‑93 (MQ=255)

                                                           caccaccacCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATgg                              >  1:4504553/1‑93 (MQ=255)

                                                            accaccaccAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGc                             <  1:2375902/93‑1 (MQ=255)

                                                            accaccaccAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGc                             <  2:90093/93‑1 (MQ=255)

                                                             ccactacgaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACACGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCa                            <  2:2083976/93‑1 (MQ=255)

                                                             ccaccaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCa                            <  1:1034556/93‑1 (MQ=255)

                                                              caccaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCaa                           >  2:3763321/1‑93 (MQ=255)

                                                               accaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAAt                          >  2:2586473/1‑93 (MQ=255)

                                                               accaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAAt                          >  2:4543030/1‑93 (MQ=255)

                                                               accaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAAt                          <  2:5433635/93‑1 (MQ=255)

                                                                 caccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGc                        <  1:4077728/93‑1 (MQ=255)

                                                                   ccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCg                      >  1:669278/1‑93 (MQ=255)

                                                                   ccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCg                      >  1:4294051/1‑93 (MQ=255)

                                                                    caGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGa                     <  1:4985863/93‑1 (MQ=255)

                                                                        gTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTc                 >  2:795766/1‑93 (MQ=255)

                                                                           aTGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCt              <  2:1241616/93‑1 (MQ=255)

                                                                           aTGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCt              <  1:5949502/93‑1 (MQ=255)

                                                                            tGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTc             >  1:91512/1‑93 (MQ=255)

                                                                            tGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTc             <  1:5653982/93‑1 (MQ=255)

                                                                             tttATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCa            <  2:1341843/92‑1 (MQ=255)

                                                                               tATCGACAGGAGTGCTGGTCGCGCTGGTTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGTAATGCCGAAGGCGCTCATa          <  1:1556484/93‑1 (MQ=255)

                                                                               tATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATa          <  2:300323/93‑1 (MQ=255)

                                                                               tATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATa          <  2:2155129/93‑1 (MQ=255)

                                                                               tATCAACAGTAGTGCTGCTCGCGCTGGATTACATGATGCAACGTTGTGAAGAAGTTGGCTACCAGAATCATGGCAATGCCGAAGTCGCTCATa          <  1:4174855/93‑1 (MQ=255)

                                                                                aTCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAg         <  1:2678520/93‑1 (MQ=255)

                                                                                aTCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAg         <  2:5968847/93‑1 (MQ=255)

                                                                                aTCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAg         <  1:5700900/93‑1 (MQ=255)

                                                                                aTCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAg         >  1:5879216/1‑93 (MQ=255)

                                                                                 tCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGc        >  2:2264054/1‑93 (MQ=255)

                                                                                    aCAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGaa     >  2:4995321/1‑93 (MQ=255)

                                                                                      agtagtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGAATc   >  1:2707524/1‑93 (MQ=255)

                                                                                      agtagtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGAATc   <  1:1368906/93‑1 (MQ=255)

CTGTGCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAATGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGAATCA  >  NC_000913/1738961‑1739140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`